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The genome of the Black Bengal goat (Capra hircus).
Siddiki, Amam Zonaed; Baten, Abdul; Billah, Masum; Alam, Mohammad Atique Ul; Shawrob, Kazi Shefaul Mulk; Saha, Sourav; Chowdhury, Muntaha; Rahman, Atif Hasan; Stear, Michael; Miah, Gous; Kumkum, Mahadia; Islam, Mohammad Sirazul; Hossain, Mohammad Alamgir; Mollah, A K M Moniruzzaman; Khan, Md Kabirul Islam.
Afiliação
  • Siddiki AZ; Genomics Research Group, Department of Pathology and Parasitology, Faculty of Veterinary Medicine, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, 4225, Bangladesh. zsiddiki@cvasu.ac.bd.
  • Baten A; AgResearch, Private Bag 11008, Palmerston North, 4410, New Zealand.
  • Billah M; Southern Cross Plant Science, Southern Cross University, Lismore, NSW, 2480, Australia.
  • Alam MAU; Genomics Research Group, Department of Pathology and Parasitology, Faculty of Veterinary Medicine, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, 4225, Bangladesh.
  • Shawrob KSM; Genomics Research Group, Department of Pathology and Parasitology, Faculty of Veterinary Medicine, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, 4225, Bangladesh.
  • Saha S; Genomics Research Group, Department of Pathology and Parasitology, Faculty of Veterinary Medicine, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, 4225, Bangladesh.
  • Chowdhury M; Genomics Research Group, Department of Pathology and Parasitology, Faculty of Veterinary Medicine, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, 4225, Bangladesh.
  • Rahman AH; Genomics Research Group, Department of Pathology and Parasitology, Faculty of Veterinary Medicine, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, 4225, Bangladesh.
  • Stear M; Department of Biological Sciences, Asian University for Women (AUW), Chattogram, 4000, Bangladesh.
  • Miah G; Department of Computer Science and Engineering, Bangladesh University of Engineering and Technology (BUET), Dhaka, 1000, Bangladesh.
  • Kumkum M; Department of Animal, Plant and Soil Sciences, School of Life Sciences, AgriBio, La Trobe University, Bundoora, VIC, 3083, Australia.
  • Islam MS; Department of Genetics and Animal Breeding, Faculty of Veterinary Medicine, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, 4225, Bangladesh.
  • Hossain MA; Genomics Research Group, Department of Pathology and Parasitology, Faculty of Veterinary Medicine, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, 4225, Bangladesh.
  • Mollah AKMM; Genomics Research Group, Department of Pathology and Parasitology, Faculty of Veterinary Medicine, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, 4225, Bangladesh.
  • Khan MKI; Genomics Research Group, Department of Pathology and Parasitology, Faculty of Veterinary Medicine, Chattogram Veterinary and Animal Sciences University (CVASU), Chattogram, 4225, Bangladesh.
BMC Res Notes ; 12(1): 362, 2019 Jun 27.
Article em En | MEDLINE | ID: mdl-31248431
OBJECTIVES: Black Bengal goat (Capra hircus), a member of the Bovidae family with the unique traits of high prolificacy, skin quality and low demand for food is the most socioeconomically significant goat breed in Bangladesh. Furthermore, the aptitude of adaptation and disease resistance capacity of it is highly notable which makes its whole genome information an area of research interest. DATA DESCRIPTION: The genomic DNA of a local (Chattogram, Bangladesh) healthy male Black Bengal goat (Capra hircus) was extracted and then sequenced. Sequencing was completed using the Illumina HiSeq 2500 sequencing platform and the draft assembly was generated using the "ARS1" genome as the reference. MAKER gene annotation pipeline was utilized to annotate 26,458 gene models. Genome completeness was assessed using BUSCO (Benchmarking Universal Single-Copy Orthologs) which showed 82.5% completeness of the assembled genome.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Cabras / Genoma Limite: Animals Idioma: En Ano de publicação: 2019 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Cabras / Genoma Limite: Animals Idioma: En Ano de publicação: 2019 Tipo de documento: Article