Graph Traversal Edit Distance and Extensions.

Ebrahimpour Boroojeny, Ali; Shrestha, Akash; Sharifi-Zarchi, Ali; Gallagher, Suzanne Renick; Sahinalp, S Cenk; Chitsaz, Hamidreza

Ebrahimpour Boroojeny, Ali; Shrestha, Akash; Sharifi-Zarchi, Ali; Gallagher, Suzanne Renick; Sahinalp, S Cenk; Chitsaz, Hamidreza.

Afiliação

Ebrahimpour Boroojeny A; Department of Computer Science, Colorado State University, Fort Collins, Colorado.
Shrestha A; Department of Computer Science, Colorado State University, Fort Collins, Colorado.
Sharifi-Zarchi A; Department of Computer Engineering, Sharif University of Technology, Tehran, Iran.
Gallagher SR; Department of Computer Science, Colorado State University, Fort Collins, Colorado.
Sahinalp SC; National Cancer Institute, NIH, Bethesda, Maryland.
Chitsaz H; Department of Computer Science, Colorado State University, Fort Collins, Colorado.

J Comput Biol ; 27(3): 317-329, 2020 03.

Article em En | MEDLINE | ID: mdl-32058803

Assuntos

Biologia Computacional/métodos; Programação Linear; Algoritmos; Animais; Mineração de Dados; Sequenciamento de Nucleotídeos em Larga Escala; Humanos; Máquina de Vetores de Suporte

Palavras-chave

assembly graph; clustering genera; co-assembly; de novo variation detection; graph comparison; graph kernel

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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Programação Linear / Biologia Computacional Limite: Animals / Humans Idioma: En Ano de publicação: 2020 Tipo de documento: Article

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