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Draft genome sequence data of Streptomyces sp. SS1-1, an endophytic strain showing cytotoxicity against the human lung cancer A549 cell line.
Nguyen, Quan Dang; Truong, Phung Minh; Vo, Thao Nguyen Thanh; Chu, Truc Dao Xuan; Nguyen, Chuong Hoang.
Afiliação
  • Nguyen QD; Biotechnology Center of Ho Chi Minh City, Ho Chi Minh City, Vietnam.
  • Truong PM; Center for Research and Application in Bioscience, Ho Chi Minh City, Vietnam.
  • Vo TNT; Biotechnology Center of Ho Chi Minh City, Ho Chi Minh City, Vietnam.
  • Chu TDX; Biotechnology Center of Ho Chi Minh City, Ho Chi Minh City, Vietnam.
  • Nguyen CH; University of Science, Vietnam National University Ho Chi Minh City, Ho Chi Minh City, Vietnam.
Data Brief ; 30: 105497, 2020 Jun.
Article em En | MEDLINE | ID: mdl-32300629
ABSTRACT
We report in this article the cytotoxicity of Streptomyces sp. SS1-1 against the human lung cancer A549 cell line, its draft genome sequence and a total of 20 predicted secondary metabolite biosynthetic gene clusters. Streptomyces sp. SS1-1 was an endophytic bacterial strain isolated from the plant Catharanthus roseus in Ho Chi Minh City, Vietnam. When cultured in the PY medium, this strain shows a cytotoxic effect on the A549 cell line. The draft genome of Streptomyces sp. SS1-1 has four contigs of total 7,815,656 bp and the GC content of this genome is 72.2%. AntiSMASH analysis reveals 20 putative biosynthetic gene clusters for the largest contig. The genome sequencing of Streptomyces sp. SS1-1 is essential for the molecular identification of gene cluster(s) responsible for secondary metabolite(s) with cytotoxic activity.
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Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2020 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2020 Tipo de documento: Article