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Dynamic aspects of pressure and temperature-stabilized intermediates of outer surface protein A.
Wakamoto, Takuro; Kitazawa, Soichiro; Kameda, Tomoshi; Kitahara, Ryo.
Afiliação
  • Wakamoto T; Graduate School of Life Sciences, Ritsumeikan University, Kusatsu, Japan.
  • Kitazawa S; College of Pharmaceutical Sciences, Ritsumeikan University, Kusatsu, Japan.
  • Kameda T; Artificial Intelligence Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan.
  • Kitahara R; Graduate School of Life Sciences, Ritsumeikan University, Kusatsu, Japan.
Proteins ; 88(11): 1423-1433, 2020 11.
Article em En | MEDLINE | ID: mdl-32519353
ABSTRACT
Structural characterization of alternatively folded and partially disordered protein conformations remains challenging. Outer surface protein A (OspA) is a pivotal protein in Borrelia infection, which is the etiological agent of Lyme disease. OspA exists in equilibrium with intermediate conformations, in which the central and the C-terminal regions of the protein have lower stabilities than the N-terminal. Here, we characterize pressure- and temperature-stabilized intermediates of OspA by nuclear magnetic resonance spectroscopy combined with paramagnetic relaxation enhancement (PRE). We found that although the C-terminal region of the intermediate was partially disordered, it retains weak specific contact with the N-terminal region, owing to a twist of the central ß-sheet and increased flexibility in the polypeptide chain. The disordered C-terminal region of the pressure-stabilized intermediate was more compact than that of the temperature-stabilized form. Further, molecular dynamics simulation demonstrated that temperature-induced disordering of the ß-sheet was initiated at the C-terminal region and continued through to the central region. An ensemble of simulation snapshots qualitatively described the PRE data from the intermediate and indicated that the intermediate structures of OspA may expose tick receptor-binding sites more readily than does the basic folded conformation.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Proteínas da Membrana Bacteriana Externa / Borrelia / Vacinas Bacterianas / Receptores de Superfície Celular / Proteínas de Artrópodes / Proteínas Intrinsicamente Desordenadas / Lipoproteínas / Antígenos de Superfície Idioma: En Ano de publicação: 2020 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Proteínas da Membrana Bacteriana Externa / Borrelia / Vacinas Bacterianas / Receptores de Superfície Celular / Proteínas de Artrópodes / Proteínas Intrinsicamente Desordenadas / Lipoproteínas / Antígenos de Superfície Idioma: En Ano de publicação: 2020 Tipo de documento: Article