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A framework to assess the quality and impact of bioinformatics training across ELIXIR.
Gurwitz, Kim T; Singh Gaur, Prakash; Bellis, Louisa J; Larcombe, Lee; Alloza, Eva; Balint, Balint Laszlo; Botzki, Alexander; Dimec, Jure; Dominguez Del Angel, Victoria; Fernandes, Pedro L; Korpelainen, Eija; Krause, Roland; Kuzak, Mateusz; Le Pera, Loredana; Leskosek, Brane; Lindvall, Jessica M; Marek, Diana; Martinez, Paula A; Muyldermans, Tuur; Nygård, Ståle; Palagi, Patricia M; Peterson, Hedi; Psomopoulos, Fotis; Spiwok, Vojtech; van Gelder, Celia W G; Via, Allegra; Vidak, Marko; Wibberg, Daniel; Morgan, Sarah L; Rustici, Gabriella.
Afiliação
  • Gurwitz KT; Department of Genetics, University of Cambridge, Cambridge, United Kingdom.
  • Singh Gaur P; EMBL-EBI, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom.
  • Bellis LJ; Department of Genetics, University of Cambridge, Cambridge, United Kingdom.
  • Larcombe L; MRC Human Genetics Unit, The Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
  • Alloza E; Barcelona Supercomputing Center (BSC), INB Coordination node, Life Sciences Department, Barcelona, Spain.
  • Balint BL; University of Debrecen, Medical Faculty, Department of Biochemistry and Molecular Biology, Debrecen, Hungary.
  • Botzki A; VIB Flanders Institute for Biotechnology, VIB Bioinformatics Core, Ghent, Belgium.
  • Dimec J; Faculty of Medicine, Institute for Biostatistics and Medical Informatics (IBMI), University of Ljubljana, Ljubljana, Slovenia.
  • Dominguez Del Angel V; IFB-URGI, Université Paris-Saclay, Centre de Recherche INRA, Versailles, France.
  • Fernandes PL; Instituto Gulbenkian de Ciência, Oeiras, Portugal.
  • Korpelainen E; CSC - IT Center for Science Ltd, Espoo, Finland.
  • Krause R; Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-sur-Alzette, Luxembourg.
  • Kuzak M; DTL Dutch Techcentre for Life Sciences, Utrecht, the Netherlands.
  • Le Pera L; Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies (IBIOM), National Research Council of Italy (CNR), Bari, Italy.
  • Leskosek B; Faculty of Medicine, Institute for Biostatistics and Medical Informatics (IBMI), University of Ljubljana, Ljubljana, Slovenia.
  • Lindvall JM; National Bioinformatics Infrastructure Sweden (NBIS), Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.
  • Marek D; SIB Training, SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.
  • Martinez PA; VIB Flanders Institute for Biotechnology, VIB Bioinformatics Core, Ghent, Belgium.
  • Muyldermans T; VIB Flanders Institute for Biotechnology, VIB Bioinformatics Core, Ghent, Belgium.
  • Nygård S; Department of Informatics, University of Oslo, Oslo, Norway.
  • Palagi PM; SIB Training, SIB Swiss Institute of Bioinformatics, Lausanne, Switzerland.
  • Peterson H; Institute of Computer Science, University of Tartu, Tartu, Estonia.
  • Psomopoulos F; Institute of Applied Biosciences (INAB), Center for Research and Technology Hellas (CERTH), Thessaloniki, Greece.
  • Spiwok V; Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Czech Republic.
  • van Gelder CWG; DTL Dutch Techcentre for Life Sciences, Utrecht, the Netherlands.
  • Via A; Institute of Molecular Biology and Pathology (IBPM), National Research Council of Italy (CNR), Rome, Italy.
  • Vidak M; Faculty of Medicine, Institute for Biostatistics and Medical Informatics (IBMI), University of Ljubljana, Ljubljana, Slovenia.
  • Wibberg D; Genome Research of Industrial Microorganisms, Center for Biotechnology, Bielefeld University, Bielefeld, Germany.
  • Morgan SL; EMBL-EBI, Wellcome Genome Campus, Hinxton, Cambridge, United Kingdom.
  • Rustici G; Department of Genetics, University of Cambridge, Cambridge, United Kingdom.
PLoS Comput Biol ; 16(7): e1007976, 2020 07.
Article em En | MEDLINE | ID: mdl-32702016
ABSTRACT
ELIXIR is a pan-European intergovernmental organisation for life science that aims to coordinate bioinformatics resources in a single infrastructure across Europe; bioinformatics training is central to its strategy, which aims to develop a training community that spans all ELIXIR member states. In an evidence-based approach for strengthening bioinformatics training programmes across Europe, the ELIXIR Training Platform, led by the ELIXIR EXCELERATE Quality and Impact Assessment Subtask in collaboration with the ELIXIR Training Coordinators Group, has implemented an assessment strategy to measure quality and impact of its entire training portfolio. Here, we present ELIXIR's framework for assessing training quality and impact, which includes the following specifying assessment aims, determining what data to collect in order to address these aims, and our strategy for centralised data collection to allow for ELIXIR-wide analyses. In addition, we present an overview of the ELIXIR training data collected over the past 4 years. We highlight the importance of a coordinated and consistent data collection approach and the relevance of defining specific metrics and answer scales for consortium-wide analyses as well as for comparison of data across iterations of the same course.
Assuntos

Texto completo: 1 Eixos temáticos: Capacitacao_em_gestao_de_ciencia / Pesquisa_clinica Base de dados: MEDLINE Assunto principal: Controle de Qualidade / Biologia Computacional Tipo de estudo: Evaluation_studies País como assunto: Europa Idioma: En Ano de publicação: 2020 Tipo de documento: Article

Texto completo: 1 Eixos temáticos: Capacitacao_em_gestao_de_ciencia / Pesquisa_clinica Base de dados: MEDLINE Assunto principal: Controle de Qualidade / Biologia Computacional Tipo de estudo: Evaluation_studies País como assunto: Europa Idioma: En Ano de publicação: 2020 Tipo de documento: Article