Mask blast with a new chemical logic of amino acids for improved protein function prediction.
Proteins
; 2021 Feb 28.
Article
em En
| MEDLINE
| ID: mdl-33641206
ABSTRACT
With the exponential increase in protein sequence data, there is an urgency to acquire a knowledge of function of the millions of sequences, using automated methods with high reliability. Conventional methods for annotating a protein sequence transfer the function of a homologous sequence with known functions based on evolutionary information. Here, we present a newer way of classifying amino acids based on chemical measures and demonstrate that, when integrated with mask BLAST, the chemical properties identified outperform current classifications of amino acids as well as evolutionary measures in function detection.
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Base de dados:
MEDLINE
Tipo de estudo:
Prognostic_studies
/
Risk_factors_studies
Idioma:
En
Ano de publicação:
2021
Tipo de documento:
Article