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The case for using mapped exonic non-duplicate reads when reporting RNA-sequencing depth: examples from pediatric cancer datasets.
Beale, Holly C; Roger, Jacquelyn M; Cattle, Matthew A; McKay, Liam T; Thompson, Drew K A; Learned, Katrina; Lyle, A Geoffrey; Kephart, Ellen T; Currie, Rob; Lam, Du Linh; Sanders, Lauren; Pfeil, Jacob; Vivian, John; Bjork, Isabel; Salama, Sofie R; Haussler, David; Vaske, Olena M.
Afiliação
  • Beale HC; UC Santa Cruz, Molecular, Cell and Developmental Biology, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Roger JM; UC Santa Cruz, Genomics Institute, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Cattle MA; UC Santa Cruz, School of Engineering, 1156 High Street, Santa Cruz, CA 95064, USA.
  • McKay LT; UC Santa Cruz, School of Engineering, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Thompson DKA; UC Santa Cruz, School of Engineering, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Learned K; UC Santa Cruz, School of Engineering, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Lyle AG; UC Santa Cruz, Genomics Institute, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Kephart ET; UC Santa Cruz, Molecular, Cell and Developmental Biology, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Currie R; UC Santa Cruz, Genomics Institute, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Lam DL; UC Santa Cruz, Genomics Institute, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Sanders L; UC Santa Cruz, Genomics Institute, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Pfeil J; UC Santa Cruz, Genomics Institute, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Vivian J; UC Santa Cruz, Molecular, Cell and Developmental Biology, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Bjork I; UC Santa Cruz, Genomics Institute, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Salama SR; UC Santa Cruz, Genomics Institute, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Haussler D; UC Santa Cruz, Genomics Institute, 1156 High Street, Santa Cruz, CA 95064, USA.
  • Vaske OM; UC Santa Cruz, Department of Biomolecular Engineering, 1156 High Street, Santa Cruz, CA 95064, USA.
Gigascience ; 10(3)2021 03 13.
Article em En | MEDLINE | ID: mdl-33712853
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: RNA / Neoplasias Limite: Child / Humans Idioma: En Ano de publicação: 2021 Tipo de documento: Article
Texto completo
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Base de dados: MEDLINE Assunto principal: RNA / Neoplasias Limite: Child / Humans Idioma: En Ano de publicação: 2021 Tipo de documento: Article