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Green algae (Viridiplantae) in sediments from three lakes on Vega Island, Antarctica, assessed using DNA metabarcoding.
Fonseca, Bárbara Medeiros; Câmara, Paulo Eduardo Aguiar Saraiva; Ogaki, Mayara Baptistucci; Pinto, Otávio Henrique Bezerra; Lirio, Juan Manuel; Coria, Silvia H; Vieira, Rosemary; Carvalho-Silva, Micheline; Amorim, Eduardo Toledo; Convey, Peter; Rosa, Luiz Henrique.
Afiliação
  • Fonseca BM; Independent Researcher, Brasília, DF, Brazil. barbara.fonseca0603@gmail.com.
  • Câmara PEAS; Departamento de Botânica, Universidade de Brasília, Brasília, DF, Brazil.
  • Ogaki MB; Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil.
  • Pinto OHB; Departamento de Biologia Celular, Universidade de Brasília, Brasília, DF, Brazil.
  • Lirio JM; Instituto Antártico Argentino, Buenos Aires, Argentina.
  • Coria SH; Instituto Antártico Argentino, Buenos Aires, Argentina.
  • Vieira R; Instituto de Geociências, Universidade Federal Fluminense, Niterói, RJ, Brazil.
  • Carvalho-Silva M; Departamento de Botânica, Universidade de Brasília, Brasília, DF, Brazil.
  • Amorim ET; CNCFLORA, Jardim Botânico do Rio de Janeiro, Rio de Janeiro, RJ, Brazil.
  • Convey P; British Antarctic Survey, Cambridge, UK.
  • Rosa LH; Department of Zoology, University of Johannesburg, Auckland Park, South Africa.
Mol Biol Rep ; 49(1): 179-188, 2022 Jan.
Article em En | MEDLINE | ID: mdl-34686990
BACKGROUND: Vega Island is located off the eastern tip of the Antarctic Peninsula (Maritime Antarctica), in the Weddell Sea. In this study, we used metabarcoding to investigate green algal DNA sequence diversity present in sediments from three lakes on Vega Island (Esmeralda, Copépodo, and Pan Negro Lakes). METHODS AND RESULTS: Total DNA was extracted and the internal transcribed spacer 2 region of the nuclear ribosomal DNA was used as a DNA barcode for molecular identification. Green algae were represented by sequences representing 78 taxa belonging to Phylum Chlorophyta, of which 32% have not previously been recorded from Antarctica. Sediment from Pan Negro Lake generated the highest number of DNA reads (11,205), followed by Esmeralda (9085) and Copépodo (1595) Lakes. Esmeralda Lake was the richest in terms of number of taxa (59), with Copépodo and Pan Negro Lakes having 30 taxa each. Bray-Curtis dissimilarity among lakes was high (~ 0.80). The Order Chlamydomonadales (Chlorophyceae) gave the highest contribution in terms of numbers of taxa and DNA reads in all lakes. The most abundant taxon was Chlorococcum microstigmatum. CONCLUSIONS: The study confirms the utility of DNA metabarcoding in assessing potential green algal diversity in Antarctic lakes, generating new Antarctic records.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: DNA Ribossômico / DNA Intergênico / Clorófitas / Código de Barras de DNA Taxonômico Idioma: En Ano de publicação: 2022 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: DNA Ribossômico / DNA Intergênico / Clorófitas / Código de Barras de DNA Taxonômico Idioma: En Ano de publicação: 2022 Tipo de documento: Article