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A generative adversarial approach to facilitate archival-quality histopathologic diagnoses from frozen tissue sections.
Falahkheirkhah, Kianoush; Guo, Tao; Hwang, Michael; Tamboli, Pheroze; Wood, Christopher G; Karam, Jose A; Sircar, Kanishka; Bhargava, Rohit.
Afiliação
  • Falahkheirkhah K; Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
  • Guo T; Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
  • Hwang M; Department of Pathology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.
  • Tamboli P; Department of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN, USA.
  • Wood CG; Department of Pathology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.
  • Karam JA; Department of Urology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.
  • Sircar K; Department of Urology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.
  • Bhargava R; Department of Translational Molecular Pathology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Lab Invest ; 102(5): 554-559, 2022 05.
Article em En | MEDLINE | ID: mdl-34963688
ABSTRACT
In clinical diagnostics and research involving histopathology, formalin-fixed paraffin-embedded (FFPE) tissue is almost universally favored for its superb image quality. However, tissue processing time (>24 h) can slow decision-making. In contrast, fresh frozen (FF) processing (<1 h) can yield rapid information but diagnostic accuracy is suboptimal due to lack of clearing, morphologic deformation and more frequent artifacts. Here, we bridge this gap using artificial intelligence. We synthesize FFPE-like images ("virtual FFPE") from FF images using a generative adversarial network (GAN) from 98 paired kidney samples derived from 40 patients. Five board-certified pathologists evaluated the results in a blinded test. Image quality of the virtual FFPE data was assessed to be high and showed a close resemblance to real FFPE images. Clinical assessments of disease on the virtual FFPE images showed a higher inter-observer agreement compared to FF images. The nearly instantaneously generated virtual FFPE images can not only reduce time to information but can facilitate more precise diagnosis from routine FF images without extraneous costs and effort.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Perfilação da Expressão Gênica / Formaldeído Tipo de estudo: Diagnostic_studies / Prognostic_studies Limite: Humans Idioma: En Ano de publicação: 2022 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Perfilação da Expressão Gênica / Formaldeído Tipo de estudo: Diagnostic_studies / Prognostic_studies Limite: Humans Idioma: En Ano de publicação: 2022 Tipo de documento: Article