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Insight into the genome data of commercially important giant kelp Macrocystis pyrifera.
Paul, Sujay; Salavarría, Erika; García, Katherine; Reyes-Calderón, Alonso; Gil-Kodaka, Patricia; Samolski, Ilanit; Srivastava, Aashish; Bandyopadhyay, Anindya; Villena, Gretty K.
Afiliação
  • Paul S; Tecnologico de Monterrey, School of Engineering and Sciences, Campus Queretaro, Av. Epigmenio Gonzalez, No. 500 Fracc. San Pablo, Queretaro CP 76130, Mexico.
  • Salavarría E; Facultad de Ciencias del Mar, Grupo de investigación 'Bioeconomia Costera', Universidad Estatal Península de Santa Elena, Km 1 Sta. Elena - La Libertad. Ecuador.
  • García K; Laboratorio de Micología y Biotecnología LMB, Universidad Nacional Agraria La Molina, Av. La Molina s/n, 12, Lima, Peru.
  • Reyes-Calderón A; Laboratorio de Micología y Biotecnología LMB, Universidad Nacional Agraria La Molina, Av. La Molina s/n, 12, Lima, Peru.
  • Gil-Kodaka P; Facultad de Pesquería, Universidad Nacional Agraria La Molina, Lima, Peru.
  • Samolski I; Laboratorio de Micología y Biotecnología LMB, Universidad Nacional Agraria La Molina, Av. La Molina s/n, 12, Lima, Peru.
  • Srivastava A; Department of Clinical Science, University of Bergen, Bergen 5021, Norway.
  • Bandyopadhyay A; International Rice Research Institute, Manila 4031, Philippines.
  • Villena GK; Reliance Industries Ltd., Navi Mumbai 400701, India.
Data Brief ; 42: 108068, 2022 Jun.
Article em En | MEDLINE | ID: mdl-35356318
ABSTRACT
Kelps or brown algae are a wide group of marine macroalgae that play an important role in aquatic ecosystems and generally have high commercial value. To facilitate brown algal studies, we report the complete genome sequence of the largest kelp Macrocystis pyrifera. The whole genome is ∼428 Mb in size, comprises 44,307 scaffolds with an average GC content of 47%, and is predicted to contain a total of 24,778 genes. 18S sequence-based phylogenetic analysis revealed that littoral brown seaweed Scytosiphon lomentaria is the closest species of M. pyrifera. Numerous genes identified in this dataset are involved in genetic information processing, signaling, and cellular processes, carbohydrate metabolism, and terpenoids biosynthesis.
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Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2022 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2022 Tipo de documento: Article