Critical Assessment of Short-Read Assemblers for the Metagenomic Identification of Foodborne and Waterborne Pathogens Using Simulated Bacterial Communities.

Chen, Zhao; Meng, Jianghong

Chen, Zhao; Meng, Jianghong.

Afiliação

Chen Z; Joint Institute for Food Safety and Applied Nutrition, University of Maryland, College Park, MD 20742, USA.
Meng J; Center for Food Safety and Security Systems, University of Maryland, College Park, MD 20742, USA.

Microorganisms ; 10(12)2022 Dec 06.

Article em En | MEDLINE | ID: mdl-36557669

Palavras-chave

Illumina sequencing; foodborne pathogen; metagenome assembly; short-read assembler; spinach; surface water; waterborne pathogen

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Texto completo: 1 Base de dados: MEDLINE Tipo de estudo: Diagnostic_studies Idioma: En Ano de publicação: 2022 Tipo de documento: Article

Texto completo

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Texto completo: 1 Base de dados: MEDLINE Tipo de estudo: Diagnostic_studies Idioma: En Ano de publicação: 2022 Tipo de documento: Article