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Gos: a declarative library for interactive genomics visualization in Python.
Manz, Trevor; L'Yi, Sehi; Gehlenborg, Nils.
Afiliação
  • Manz T; Department of Biomedical Informatics, Harvard Medical School, Boston, MA 02115, USA.
  • L'Yi S; Department of Biomedical Informatics, Harvard Medical School, Boston, MA 02115, USA.
  • Gehlenborg N; Department of Biomedical Informatics, Harvard Medical School, Boston, MA 02115, USA.
Bioinformatics ; 39(1)2023 01 01.
Article em En | MEDLINE | ID: mdl-36688709
SUMMARY: Gos is a declarative Python library designed to create interactive multiscale visualizations of genomics and epigenomics data. It provides a consistent and simple interface to the flexible Gosling visualization grammar. Gos hides technical complexities involved with configuring web-based genome browsers and integrates seamlessly within computational notebooks environments to enable new interactive analysis workflows. AVAILABILITY AND IMPLEMENTATION: Gos is released under the MIT License and available on the Python Package Index (PyPI). The source code is publicly available on GitHub (https://github.com/gosling-lang/gos), and documentation with examples can be found at https://gosling-lang.github.io/gos.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Biologia Computacional / Gansos Limite: Animals Idioma: En Ano de publicação: 2023 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Biologia Computacional / Gansos Limite: Animals Idioma: En Ano de publicação: 2023 Tipo de documento: Article