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Ten quick tips for building FAIR workflows.
de Visser, Casper; Johansson, Lennart F; Kulkarni, Purva; Mei, Hailiang; Neerincx, Pieter; Joeri van der Velde, K; Horvatovich, Péter; van Gool, Alain J; Swertz, Morris A; Hoen, Peter A C 't; Niehues, Anna.
Afiliação
  • de Visser C; Medical BioSciences Department, Radboud University Medical Center, Nijmegen, the Netherlands.
  • Johansson LF; Genomics Coordination Center and Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, the Netherlands.
  • Kulkarni P; Medical BioSciences Department, Radboud University Medical Center, Nijmegen, the Netherlands.
  • Mei H; Translational Metabolic Laboratory, Department of Laboratory Medicine, Radboud University Medical Center, Nijmegen, the Netherlands.
  • Neerincx P; Department of Human Genetics, Radboud University Medical Center, Nijmegen, the Netherlands.
  • Joeri van der Velde K; Sequencing Analysis Support Core, Department of Biomedical Data Sciences, Leiden University Medical Center, Leiden, the Netherlands.
  • Horvatovich P; Genomics Coordination Center and Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, the Netherlands.
  • van Gool AJ; Genomics Coordination Center and Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, the Netherlands.
  • Swertz MA; Department of Analytical Biochemistry, Groningen Research Institute of Pharmacy, University of Groningen, Groningen, the Netherlands.
  • Hoen PAC'; Translational Metabolic Laboratory, Department of Laboratory Medicine, Radboud University Medical Center, Nijmegen, the Netherlands.
  • Niehues A; Department of Human Genetics, Radboud University Medical Center, Nijmegen, the Netherlands.
PLoS Comput Biol ; 19(9): e1011369, 2023 Sep.
Article em En | MEDLINE | ID: mdl-37768885
ABSTRACT
Research data is accumulating rapidly and with it the challenge of fully reproducible science. As a consequence, implementation of high-quality management of scientific data has become a global priority. The FAIR (Findable, Accesible, Interoperable and Reusable) principles provide practical guidelines for maximizing the value of research data; however, processing data using workflows-systematic executions of a series of computational tools-is equally important for good data management. The FAIR principles have recently been adapted to Research Software (FAIR4RS Principles) to promote the reproducibility and reusability of any type of research software. Here, we propose a set of 10 quick tips, drafted by experienced workflow developers that will help researchers to apply FAIR4RS principles to workflows. The tips have been arranged according to the FAIR acronym, clarifying the purpose of each tip with respect to the FAIR4RS principles. Altogether, these tips can be seen as practical guidelines for workflow developers who aim to contribute to more reproducible and sustainable computational science, aiming to positively impact the open science and FAIR community.

Texto completo: 1 Base de dados: MEDLINE Tipo de estudo: Guideline Idioma: En Ano de publicação: 2023 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Tipo de estudo: Guideline Idioma: En Ano de publicação: 2023 Tipo de documento: Article