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Genetic justification of COVID-19 patient outcomes using DERGA, a novel data ensemble refinement greedy algorithm.
Asteris, Panagiotis G; Gandomi, Amir H; Armaghani, Danial J; Tsoukalas, Markos Z; Gavriilaki, Eleni; Gerber, Gloria; Konstantakatos, Gerasimos; Skentou, Athanasia D; Triantafyllidis, Leonidas; Kotsiou, Nikolaos; Braunstein, Evan; Chen, Hang; Brodsky, Robert; Touloumenidou, Tasoula; Sakellari, Ioanna; Alkayem, Nizar Faisal; Bardhan, Abidhan; Cao, Maosen; Cavaleri, Liborio; Formisano, Antonio; Guney, Deniz; Hasanipanah, Mahdi; Khandelwal, Manoj; Mohammed, Ahmed Salih; Samui, Pijush; Zhou, Jian; Terpos, Evangelos; Dimopoulos, Meletios A.
Afiliação
  • Asteris PG; Computational Mechanics Laboratory, School of Pedagogical and Technological Education, Athens, Greece.
  • Gandomi AH; Faculty of Engineering & IT, University of Technology Sydney, Sydney, New South Wales, Australia.
  • Armaghani DJ; University Research and Innovation Center (EKIK), Óbuda University, Budapest, Hungary.
  • Tsoukalas MZ; School of Civil and Environmental Engineering, University of Technology Sydney, Sydney, New South Wales, Australia.
  • Gavriilaki E; Computational Mechanics Laboratory, School of Pedagogical and Technological Education, Athens, Greece.
  • Gerber G; 2nd Propedeutic Department of Internal Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece.
  • Konstantakatos G; Hematology Division, Johns Hopkins University, Baltimore, USA.
  • Skentou AD; Computational Mechanics Laboratory, School of Pedagogical and Technological Education, Athens, Greece.
  • Triantafyllidis L; Computational Mechanics Laboratory, School of Pedagogical and Technological Education, Athens, Greece.
  • Kotsiou N; Computational Mechanics Laboratory, School of Pedagogical and Technological Education, Athens, Greece.
  • Braunstein E; 2nd Propedeutic Department of Internal Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece.
  • Chen H; Hematology Division, Johns Hopkins University, Baltimore, USA.
  • Brodsky R; Hematology Division, Johns Hopkins University, Baltimore, USA.
  • Touloumenidou T; Hematology Division, Johns Hopkins University, Baltimore, USA.
  • Sakellari I; Hematology Department - BMT Unit, G Papanicolaou Hospital, Thessaloniki, Greece.
  • Alkayem NF; Hematology Department - BMT Unit, G Papanicolaou Hospital, Thessaloniki, Greece.
  • Bardhan A; College of Civil and Transportation Engineering, Hohai University, Nanjing, China.
  • Cao M; Civil Engineering Department, National Institute of Technology Patna, Patna, India.
  • Cavaleri L; Department of Engineering Mechanics, Hohai University, Nanjing, China.
  • Formisano A; Department of Civil, Environmental, Aerospace and Materials Engineering, University of Palermo, Palermo, Italy.
  • Guney D; Department of Structures for Engineering and Architecture, University of Naples "Federico II", Naples, Italy.
  • Hasanipanah M; Engineering Faculty, San Diego State University, San Diego, California, USA.
  • Khandelwal M; Department of Geotechnics and Transportation, Faculty of Civil Engineering, Universiti Teknologi Malaysia, Johor Bahru, Malaysia.
  • Mohammed AS; Institute of Innovation, Science and Sustainability, Federation University Australia, Ballarat, Victoria, Australia.
  • Samui P; Engineering Department, American University of Iraq, Sulaymaniyah, Iraq.
  • Zhou J; Civil Engineering Department, National Institute of Technology Patna, Patna, India.
  • Terpos E; School of Resources and Safety Engineering, Central South University, Changsha, China.
  • Dimopoulos MA; Department of Clinical Therapeutics, Medical School, Faculty of Medicine, National Kapodistrian University of Athens, Athens, Greece.
J Cell Mol Med ; 28(4): e18105, 2024 02.
Article em En | MEDLINE | ID: mdl-38339761
ABSTRACT
Complement inhibition has shown promise in various disorders, including COVID-19. A prediction tool including complement genetic variants is vital. This study aims to identify crucial complement-related variants and determine an optimal pattern for accurate disease outcome prediction. Genetic data from 204 COVID-19 patients hospitalized between April 2020 and April 2021 at three referral centres were analysed using an artificial intelligence-based algorithm to predict disease outcome (ICU vs. non-ICU admission). A recently introduced alpha-index identified the 30 most predictive genetic variants. DERGA algorithm, which employs multiple classification algorithms, determined the optimal pattern of these key variants, resulting in 97% accuracy for predicting disease outcome. Individual variations ranged from 40 to 161 variants per patient, with 977 total variants detected. This study demonstrates the utility of alpha-index in ranking a substantial number of genetic variants. This approach enables the implementation of well-established classification algorithms that effectively determine the relevance of genetic variants in predicting outcomes with high accuracy.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: COVID-19 Tipo de estudo: Prognostic_studies Limite: Humans Idioma: En Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: COVID-19 Tipo de estudo: Prognostic_studies Limite: Humans Idioma: En Ano de publicação: 2024 Tipo de documento: Article