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[Expression and significance analysis of GDF3 in testicular cancer based on TCGA and GTEx databases].
Yan, Ze-Chen; Liu, Tong-Hu; Yu, Shuan-Bao; Zhan, Yong-Hao; Wang, Zhi-Yu; Zhu, Zhao-Wei; Reng, Yi-Lin; Shang, Xue-Jun; Zhang, Xue-Pei.
Afiliação
  • Yan ZC; Department of Urology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan 450001, China.
  • Liu TH; Department of Urology, Nanjing Clinical Medical College, Southern Medical University/Eastern Theater General Hospital, Nanjing, Jiangsu 210002, China.
  • Yu SB; Department of Urology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan 450001, China.
  • Zhan YH; Department of Urology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan 450001, China.
  • Wang ZY; Department of Urology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan 450001, China.
  • Zhu ZW; Department of Urology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan 450001, China.
  • Reng YL; Department of Urology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan 450001, China.
  • Shang XJ; Department of Urology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan 450001, China.
  • Zhang XP; Department of Urology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan 450001, China.
Zhonghua Nan Ke Xue ; 29(12): 980-985, 2023 Dec.
Article em Zh | MEDLINE | ID: mdl-38639949
ABSTRACT

OBJECTIVE:

To investigate the expression and significance of GDF3 in testicular cancer through bioinformatics analysis.

METHODS:

Using the TCGA and GTEx databases, differential expression analysis and pan-cancer analysis were performed to identify the target gene GDF3, and the clinical relevance of GDF3 in testicular cancer was analyzed using the UALCAN database. Based on the R packages "org.Hs.eg.db" and "clusterProfiler," gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were conducted to explore the potential functions of GDF3 in testicular cancer. The correlation of GDF3 with immune chemokines and immune inhibitors in testicular cancer was investigated using the TISIDB database.

RESULTS:

The GDF3 was significantly upregulated in testicular cancer (P<0.001) and closely associated with clinical staging (P<0.05) and tumor subtypes (P<0.001). The immune-related analysis revealed that GDF3 was strongly correlated with immune chemokines CCL26 (rho=0.599, P<0.001), CCL7 (rho=0.525, P<0.001), immune inhibitor ADORA2A (rho=0.723, P<0.001), and PVRL2 (rho=0.585, P<0.001).

CONCLUSION:

The GDF3 is closely related to the occurrence, development, and immune microenvironment of testicular cancer.
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Base de dados: MEDLINE Assunto principal: Neoplasias Testiculares / Neoplasias Embrionárias de Células Germinativas / Fator 3 de Diferenciação de Crescimento Limite: Humans / Male Idioma: Zh Ano de publicação: 2023 Tipo de documento: Article
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Base de dados: MEDLINE Assunto principal: Neoplasias Testiculares / Neoplasias Embrionárias de Células Germinativas / Fator 3 de Diferenciação de Crescimento Limite: Humans / Male Idioma: Zh Ano de publicação: 2023 Tipo de documento: Article