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1.
Clin Exp Immunol ; 213(2): 235-242, 2023 07 21.
Artigo em Inglês | MEDLINE | ID: mdl-37243348

RESUMO

Passive transfer of antithyroid antibodies in mice leads to reproductive disorders. The purpose was to assess the placental tissue of experimental animals under the influence of the circulating thyroperoxidase antibodies. We performed an immunohistochemical examination of murine placentae after a passive transfer of thyroperoxidase antibodies. Placentae of mice that passively transferred IgG from healthy donors were used as control samples. For histological examination, 30 placental samples were selected from mice from the anti-TPO group and 40 placental samples were taken from mice from the IgG group. Immunostaining for VEGFR1, THBS 1, Laminin, CD31, CD34, FGF-ß, CD56, CD14, TNF-α, kisspeptin, MCL 1, and Annexin V was performed. There is a significant decrease in the relative area of the expression of VEGFR1 (23.42 ± 0.85 vs. 33.44 ± 0.35, P < 0.01), thrombospondin 1 (31.29 ± 0.83 vs. 34.51 ± 0.75, P < 0.01), CD14 (25.80 ± 0.57 vs. 32.07 ± 0.36, P < .01), CD56 (30.08 ± 0.90 vs. 34.92 ± 0.15, P < 0.01), kisspeptin (25.94 ± 0.47 vs. 31.27 ± 0.57, P < 0.01), MCL 1 (29.24 ± 1.06 vs. 38.57 ± 0.79, P < 0.01) in the labyrinth zone of the placentae of mice from the anti-TPO group compared with control group. A significant increase in the relative expression of laminin and FGF-ß was noted in the group of mice to which antibodies to thyroperoxidase were transferred, compared with the control group (36.73 ± 1.38 vs. 29.83 ± 0.94, P < 0.01 and 23.26 ± 0.61 vs. 16.38 ± 1.01, P < 0.01respectively). Our study exposed an imbalance of pro- and anti-angiogenic factors, decreased representation of placental macrophages and NK cells, abnormal trophoblast invasion processes, and insufficient expression of antiapoptotic factors in the placentae of mice in which anti-TPO antibodies were passively transferred.


Assuntos
Laminina , Placenta , Gravidez , Feminino , Animais , Camundongos , Placenta/patologia , Laminina/metabolismo , Kisspeptinas/metabolismo , Proteína de Sequência 1 de Leucemia de Células Mieloides/metabolismo , Imunoglobulina G/metabolismo
2.
Chemistry ; 21(48): 17324-35, 2015 Nov 23.
Artigo em Inglês | MEDLINE | ID: mdl-26463581

RESUMO

The catalytic activity of large zeolite H-ZSM-5 crystals in methanol (MTO) and ethanol-to-olefins (ETO) conversions was investigated and, using operando UV/Vis measurements, the catalytic activity and deactivation was correlated with the formation of coke. These findings were related to in situ single crystal UV/Vis and confocal fluorescence micro-spectroscopy, allowing the observation of the spatiotemporal formation of intermediates and coke species during the MTO and ETO conversions. It was observed that rapid deactivation at elevated temperatures was due to the fast formation of aromatics at the periphery of the H-ZSM-5 crystals, which are transformed into more poly-aromatic coke species at the external surface, preventing the diffusion of reactants and products into and out of the H-ZSM-5 crystal. Furthermore, we were able to correlate the operando UV/Vis spectroscopy results observed during catalytic testing with the single crystal in situ results.

3.
Proc Natl Acad Sci U S A ; 108(37): 15174-8, 2011 Sep 13.
Artigo em Inglês | MEDLINE | ID: mdl-21876142

RESUMO

Bacterial cell surfaces are commonly decorated with a layer formed from multiple copies of adhesin proteins whose binding interactions initiate colonization and infection processes. In this study, we investigate the physical deformability of the UspA1 adhesin protein from Moraxella catarrhalis, a causative agent of middle-ear infections in humans. UspA1 binds a range of extracellular proteins including fibronectin, and the epithelial cellular receptor carcinoembryonic antigen-related cell adhesion molecule 1 (CEACAM1). Electron microscopy indicates that unliganded UspA1 is densely packed at, and extends about 800 Å from, the Moraxella surface. Using a modified atomic force microscope, we show that the adhesive properties and thickness of the UspA1 layer at the cell surface varies on addition of either fibronectin or CEACAM1. This in situ analysis is then correlated with the molecular structure of UspA1. To provide an overall model for UspA1, we have determined crystal structures for two N-terminal fragments which are then combined with a previous structure of the CEACAM1-binding site. We show that the UspA1-fibronectin complex is formed between UspA1 head region and the 13th type-III domain of fibronectin and, using X-ray scattering, that the complex involves an angular association between these two proteins. In combination with a previous study, which showed that the CEACAM1-UspA1 complex is distinctively bent in solution, we correlate these observations on isolated fragments of UspA1 with its in situ response on the cell surface. This study therefore provides a rare direct demonstration of protein conformational change at the cell surface.


Assuntos
Adesinas Bacterianas/metabolismo , Antígenos CD/metabolismo , Proteínas da Membrana Bacteriana Externa/metabolismo , Moléculas de Adesão Celular/metabolismo , Fibronectinas/metabolismo , Mecanotransdução Celular , Moraxella catarrhalis/metabolismo , Adesinas Bacterianas/ultraestrutura , Proteínas da Membrana Bacteriana Externa/química , Proteínas da Membrana Bacteriana Externa/ultraestrutura , Membrana Celular/metabolismo , Humanos , Microscopia de Força Atômica , Modelos Moleculares , Moraxella catarrhalis/ultraestrutura , Ligação Proteica , Espalhamento a Baixo Ângulo , Difração de Raios X
4.
Mol Microbiol ; 82(5): 1129-49, 2011 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-22050461

RESUMO

Complement evasion is an important survival strategy of Neisseria meningitidis (Nm) during colonization and infection. Previously, we have shown that Nm Opc binds to serum vitronectin to inhibit complement-mediated killing. In this study, we demonstrate meningococcal interactions with vitronectin via a novel adhesin, Msf (meningococcal surface fibril, previously NhhA or Hsf). As with Opc, Msf binds preferentially to activated vitronectin (aVn), engaging at its N-terminal region but the C-terminal heparin binding domain may also participate. However, unlike Opc, the latter binding is not heparin-mediated. By binding to aVn, Msf or Opc can impart serum resistance, which is further increased in coexpressers, a phenomenon dependent on serum aVn concentrations. The survival fitness of aVn-binding derivatives was evident from mixed population studies, in which msf/opc mutants were preferentially depleted. In addition, using vitronectin peptides to block Msf-aVn interactions, aVn-induced inhibition of lytic C5b-9 formation and of serum killing could be reversed. As Msf-encoding gene is ubiquitous in the meningococcal strains examined and is expressed in vivo, serum resistance via Msf may be of significance to meningococcal pathogenesis. The data imply that vitronectin binding may be an important strategy for the in vivo survival of Nm for which the bacterium has evolved redundant mechanisms.


Assuntos
Adesinas Bacterianas/metabolismo , Atividade Bactericida do Sangue , Complexo de Ataque à Membrana do Sistema Complemento/antagonistas & inibidores , Interações Hospedeiro-Patógeno , Neisseria meningitidis/imunologia , Neisseria meningitidis/patogenicidade , Vitronectina/metabolismo , Evasão da Resposta Imune , Proteínas de Membrana/metabolismo , Modelos Moleculares , Neisseria meningitidis/metabolismo , Domínios e Motivos de Interação entre Proteínas , Mapeamento de Interação de Proteínas
5.
EMBO J ; 27(12): 1779-89, 2008 Jun 18.
Artigo em Inglês | MEDLINE | ID: mdl-18497748

RESUMO

Moraxella catarrhalis is a ubiquitous human-specific bacterium commonly associated with upper and lower respiratory tract infections, including otitis media, sinusitis and chronic obstructive pulmonary disease. The bacterium uses an autotransporter protein UspA1 to target an important human cellular receptor carcinoembryonic antigen-related cell adhesion molecule 1 (CEACAM1). Using X-ray crystallography, we show that the CEACAM1 receptor-binding region of UspA1 unusually consists of an extended, rod-like left-handed trimeric coiled-coil. Mutagenesis and binding studies of UspA1 and the N-domain of CEACAM1 have been used to delineate the interacting surfaces between ligand and receptor and guide assembly of the complex. However, solution scattering, molecular modelling and electron microscopy analyses all indicate that significant bending of the UspA1 coiled-coil stalk also occurs. This explains how UspA1 can engage CEACAM1 at a site far distant from its head group, permitting closer proximity of the respective cell surfaces during infection.


Assuntos
Adesinas Bacterianas/metabolismo , Antígenos CD/metabolismo , Proteínas da Membrana Bacteriana Externa/metabolismo , Moléculas de Adesão Celular/metabolismo , Adesinas Bacterianas/química , Antígenos CD/química , Proteínas da Membrana Bacteriana Externa/química , Sítios de Ligação , Moléculas de Adesão Celular/química , Dicroísmo Circular , Cristalografia por Raios X , Humanos , Modelos Moleculares , Mutagênese Sítio-Dirigida , Ligação Proteica , Estrutura Secundária de Proteína , Receptores de Superfície Celular , Termodinâmica
6.
Anal Methods ; 14(28): 2771-2781, 2022 07 21.
Artigo em Inglês | MEDLINE | ID: mdl-35796237

RESUMO

Functionalized adsorbents with poly-(4,9-dioxododecane-1,12-guanidine) (SiO2-PDDG) and mercaptophenyl groups (MPhS) were used for the separation of Se(VI) and Se(IV) for the first time. Fixation of PDDG was characterized by capillary electrophoresis and TGA/DSC. The quantitative extraction of Se(VI) proceeded due to anion exchange at pH 3-7. The adsorption capacity of SiO2-PDDG for Se(VI) was 28 µmol g-1. Silicas with mercaptophenyl groups were used for the extraction of Se(IV) from solutions in the range of 2 M HCl - pH 6.5. The adsorption capacity of MPhS was 35 µmol g-1. A system of columns containing synthesized adsorbents was proposed for the separation of Se(VI) and Se(IV) and their subsequent determination by ICP-MS. Optimal parameters of adsorption include a flow rate of 1 mL min-1, pH of 5, and sample volume of 200 mL. Se(IV) was desorbed with 5 mL of 0.25 M 2,3-dimercapto-1-propanesulphonic acid and Se(VI) with 5 mL of 1 M HNO3. The preconcentration factor was 40. The limits of detection (3s) were 0.75 and 1.25 ng L-1 for Se(VI) and Se(IV), respectively. The proposed method (SPE-ICPMS) was used to determine selenium species in natural water and certified reference materials. The separation was carried out directly at the sampling site.


Assuntos
Selênio , Adsorção , Selênio/análise , Selênio/química , Dióxido de Silício/química , Extração em Fase Sólida/métodos , Água/química
7.
J Bacteriol ; 193(5): 1250-8, 2011 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-21216999

RESUMO

Dimethylsulfide (DMS) is a volatile organosulfur compound which has been implicated in the biogeochemical cycling of sulfur and in climate control. Microbial degradation is a major sink for DMS. DMS metabolism in some bacteria involves its oxidation by a DMS monooxygenase in the first step of the degradation pathway; however, this enzyme has remained uncharacterized until now. We have purified a DMS monooxygenase from Hyphomicrobium sulfonivorans, which was previously isolated from garden soil. The enzyme is a member of the flavin-linked monooxygenases of the luciferase family and is most closely related to nitrilotriacetate monooxygenases. It consists of two subunits: DmoA, a 53-kDa FMNH2-dependent monooxygenase, and DmoB, a 19-kDa NAD(P)H-dependent flavin oxidoreductase. Enzyme kinetics were investigated with a range of substrates and inhibitors. The enzyme had a K(m) of 17.2 (± 0.48) µM for DMS (k(cat) = 5.45 s⁻¹) and a V(max) of 1.25 (± 0.01) µmol NADH oxidized min⁻¹ (mg protein⁻¹). It was inhibited by umbelliferone, 8-anilinonaphthalenesulfonate, a range of metal-chelating agents, and Hg²(+), Cd²(+), and Pb²(+) ions. The purified enzyme had no activity with the substrates of related enzymes, including alkanesulfonates, aldehydes, nitrilotriacetate, or dibenzothiophenesulfone. The gene encoding the 53-kDa enzyme subunit has been cloned and matched to the enzyme subunit by mass spectrometry. DMS monooxygenase represents a new class of FMNH2-dependent monooxygenases, based on its specificity for dimethylsulfide and the molecular phylogeny of its predicted amino acid sequence. The gene encoding the large subunit of DMS monooxygenase is colocated with genes encoding putative flavin reductases, homologues of enzymes of inorganic and organic sulfur compound metabolism, and enzymes involved in riboflavin synthesis.


Assuntos
Proteínas de Bactérias/metabolismo , Hyphomicrobium/enzimologia , Hyphomicrobium/metabolismo , Oxigenases de Função Mista/metabolismo , Proteínas de Bactérias/genética , Clonagem Molecular , Eletroforese em Gel de Poliacrilamida , Regulação Bacteriana da Expressão Gênica/fisiologia , Hyphomicrobium/genética , Metais/metabolismo , Oxigenases de Função Mista/química , Oxigenases de Função Mista/genética , Anotação de Sequência Molecular , Dados de Sequência Molecular , Filogeografia
8.
Anal Chim Acta ; 1178: 338824, 2021 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-34482870

RESUMO

A simple and highly efficient method for the determination of highly toxic arsenic species using non-covalently aminated silica is proposed. The polyamines including poly(hexamethyleneguanidine), poly(4,9-dioxadodecane-1,12-guanidine), hexadimethrine, and poly(diallyldimethylammonium) were tested as silica modifiers. The prepared adsorbents allow effective preconcentration of anionic species of arsenic from aqueous solutions. It was found that As(V) can be quantitatively extracted from solutions at pH 4.5-7.0 by the anion exchange mechanism in less than 5 min, while neutral at this pH As(III) was not adsorbed at these conditions. A reaction with 2,3-dimercapto-1-propanesulphonic acid, which resulted in the formation of the negatively charged complex of As(III) with adsorbents was used for its quantitative extraction from solutions with a pH of 3.5-6.5. A system of two cartridges filled with poly(diallyldimethylammonium) modified silica and the on-line reaction of As(III) with 2,3-dimercapto-1-propanesulphonic acid proceeding between the cartridges was used for separate preconcentration and determination of As(V) and As(III) at pH 5. The proposed method was used for four-year monitoring of natural water pollution by arsenic in the area of residence of the indigenous peoples of Tyva Republic (Russia).


Assuntos
Arsênio , Concentração de Íons de Hidrogênio , Poliaminas , Dióxido de Silício , Água
9.
Am J Reprod Immunol ; 85(1): e13331, 2021 01.
Artigo em Inglês | MEDLINE | ID: mdl-32893404

RESUMO

PROBLEM: Antibody-mediated autoimmune diseases, such as autoimmune thyroid diseases (ATD), systemic lupus erythematosus (SLE), and antiphospholipid syndrome (APS), often are associated with recurrent fetal loss. One of the ATD is Hashimoto's thyroiditis which recently showed association with complications of pregnancy with increased levels of circulating autoantibodies reactive with epitopes on thyroid tissue such as thyroid peroxidase (anti-TPO). In retrospective study of sera analyses in patients with Hashimoto's thyroiditis, all patients had mainly elevated circulating anti-TPO autoantibodies. AIM: We assessed the potential of human anti-TPO highly positive IgG, derived from patients with Hashimoto's thyroiditis sera associated with complications of pregnancy, to cause directly complications of pregnancy in murine model. METHOD OF STUDY: Naïve ICR female mice, infused intravenously with 100 µg of anti-TPO-positive IgG, showed increased fetal loss and embryo small for date (P < .001) in comparison with mice passively transferred with commercial IgG or PBS. Moreover, we observed embryos small for date in the mice passively transferred with anti-TPO-positive IgG, exemplified by reduced weight of embryos and placentae (P = .001). Histopathological examination revealed delay in fetal development in 50% cases of anti-TPO-positive IgG-treated mice. Importantly, pathological changes in the transition zone, state of glycogen cells, and significant structural changes in the labyrinth part of placenta were observed in all anti-TPO-positive IgG samples. CONCLUSION: The current study shows in the first time, a direct proof of concept, on the association of human TPO-positive IgG from Hashimoto's thyroiditis patients on fetal loss induction in murine model.


Assuntos
Autoanticorpos/imunologia , Autoantígenos/imunologia , Morte Fetal , Doença de Hashimoto/imunologia , Imunoglobulina G/imunologia , Iodeto Peroxidase/imunologia , Proteínas de Ligação ao Ferro/imunologia , Complicações na Gravidez/imunologia , Animais , Feminino , Doença de Hashimoto/sangue , Humanos , Camundongos Endogâmicos ICR , Placenta/patologia , Gravidez
10.
Clin Sci (Lond) ; 118(9): 547-64, 2010 Feb 09.
Artigo em Inglês | MEDLINE | ID: mdl-20132098

RESUMO

The human species is the only natural host of Neisseria meningitidis, an important cause of bacterial meningitis globally, and, despite its association with devastating diseases, N. meningitidis is a commensal organism found frequently in the respiratory tract of healthy individuals. To date, antibiotic resistance is relatively uncommon in N. meningitidis isolates but, due to the rapid onset of disease in susceptible hosts, the mortality rate remains approx. 10%. Additionally, patients who survive meningococcal disease often endure numerous debilitating sequelae. N. meningitidis strains are classified primarily into serogroups based on the type of polysaccharide capsule expressed. In total, 13 serogroups have been described; however, the majority of disease is caused by strains belonging to one of only five serogroups. Although vaccines have been developed against some of these, a universal meningococcal vaccine remains a challenge due to successful immune evasion strategies of the organism, including mimicry of host structures as well as frequent antigenic variation. N. meningitidis express a range of virulence factors including capsular polysaccharide, lipopolysaccharide and a number of surface-expressed adhesive proteins. Variation of these surface structures is necessary for meningococci to evade killing by host defence mechanisms. Nonetheless, adhesion to host cells and tissues needs to be maintained to enable colonization and ensure bacterial survival in the niche. The aims of the present review are to provide a brief outline of meningococcal carriage, disease and burden to society. With this background, we discuss several bacterial strategies that may enable its survival in the human respiratory tract during colonization and in the blood during infection. We also examine several known meningococcal adhesion mechanisms and conclude with a section on the potential processes that may operate in vivo as meningococci progress from the respiratory niche through the blood to reach the central nervous system.


Assuntos
Infecções Meningocócicas/microbiologia , Neisseria meningitidis/patogenicidade , Portador Sadio , Interações Hospedeiro-Patógeno , Humanos , Meninges/microbiologia , Infecções Meningocócicas/terapia , Nasofaringe/microbiologia , Neisseria meningitidis/classificação , Neisseria meningitidis/fisiologia , Virulência
11.
J Anal Methods Chem ; 2017: 8208146, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-29214095

RESUMO

Silica gel, sequentially modified with polyhexamethylene guanidine and pyrocatechin-3,5-disulfonic acid (Tiron), was suggested for sorption separation and determination of Fe(III) and Fe(II). It was found that quantitative extraction of Fe(III) and its separation from Fe(II) were attained at pH 2.5-4.0, while quantitative extraction of Fe(II) was observed at pH 6.0-7.5. An intensive signal with g = 4.27, which is characteristic for Fe(III), appeared in EPR spectra of the sorbents after Fe(II) and Fe(III) sorption. During interaction between Fe(II) and Tiron, fixed on the sorbent surface, its oxidation up to Fe(III) occurred. Red-lilac complexes of the composition FeL3 were formed on the sorbent surface during sorption regardless of initial oxidation level of iron. Diffuse reflectance spectrum of surface complexes exhibited wide band with slightly expressed maxima at 480 and 510 nm. Procedures for separation and photometric determination of Fe(III) and Fe(II) at the joint presence and total Fe content determination as Fe(II) in waste and natural waters was developed. The limit of detection for iron was 0.05 µg per 0.100 g of the sorbent. The calibration graph was linear up to 20.0 µg of Fe per 0.100 g of the sorbent. The RSD in the determination of more than 0.2 µg of Fe was less than 0.06.

12.
PLoS One ; 10(3): e0124133, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-25826209

RESUMO

The human pathogen Neisseria meningitides (Nm) attains serum resistance via a number of mechanisms, one of which involves binding to the host complement regulator protein vitronectin. We have shown previously that the Meningococcal surface fibril (Msf), a trimeric autotransporter, binds to the activated form of vitronectin (aVn) to increase Nm survival in human serum. In this study, we aimed to identify the aVn-binding region of Msf to assess its potential as an antigen which can elicit antibodies that block aVn binding and/or possess bactericidal properties. Using several recombinant Msf fragments spanning its surface-exposed region, the smallest aVn-binding recombinants were found to span residues 1-86 and 39-124. The use of further deletion constructs and overlapping recombinant Msf fragments suggested that a region of Msf comprising residues 39-82 may be primarily important for aVn binding and that other regions may also be involved but to a lesser extent. Molecular modelling implicated K66 and K68, conserved in all available Msf sequences, to be involved in the interaction. Recombinant fragments which bound to aVn were able to reduce the survival advantage conveyed by aVn-interaction in serum bactericidal assays. Antibodies raised against one such fragment inhibited aVn binding to Msf. In addition, the antibodies enhanced specific killing of Msf-expressing Nm in a dose-dependent manner. Overall, this study identifies an aVn-binding region of Msf, an adhesin known to impart serum resistance properties to the pathogen; and shows that this region of Msf can elicit antibodies with dual properties which reduce pathogen survival within the host and thus has potential as a vaccine antigen.


Assuntos
Proteínas de Bactérias/metabolismo , Neisseria meningitidis/metabolismo , Vitronectina/metabolismo , Sequência de Aminoácidos , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Sítios de Ligação , Dados de Sequência Molecular
13.
Appl Environ Microbiol ; 73(20): 6460-7, 2007 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-17704278

RESUMO

Soluble methane monooxygenase (sMMO) from methane-oxidizing bacteria is a multicomponent nonheme oxygenase that naturally oxidizes methane to methanol and can also cooxidize a wide range of adventitious substrates, including mono- and diaromatic hydrocarbons. Leucine 110, at the mouth of the active site in the alpha subunit of the hydroxylase component of sMMO, has been suggested to act as a gate to control the access of substrates to the active site. Previous crystallography of the wild-type sMMO has indicated at least two conformations of the enzyme that have the "leucine gate" open to different extents, and mutagenesis of homologous enzymes has indicated a role for this residue in the control of substrate range and regioselectivity with aromatic substrates. By further refinement of the system for homologous expression of sMMO that we developed previously, we have been able to prepare a range of site-directed mutations at position 110 in the alpha subunit of sMMO. All the mutants (with Gly, Cys, Arg, and Tyr, respectively, at this position) showed relaxations of regioselectivity compared to the wild type with monoaromatic substrates and biphenyl, including the appearance of new products arising from hydroxylation at the 2- and 3- positions on the benzene ring. Mutants with the larger Arg and Trp residues at position 110 also showed shifts in regioselectivity during naphthalene hydroxylation from the 2- to the 1- position. No evidence that mutagenesis of Leu 110 could allow very large substrates to enter the active site was found, however, since the mutants (like the wild type) were inactive toward the triaromatic hydrocarbons anthracene and phenanthrene. Thus, our results indicate that the "leucine gate" in sMMO is more important in controlling the precision of regioselectivity than the sizes of substrates that can enter the active site.


Assuntos
Leucina/genética , Methylosinus trichosporium/enzimologia , Mutagênese Sítio-Dirigida , Oxigenases/genética , Oxigenases/metabolismo , Catálise , Leucina/química , Methylosinus trichosporium/genética , Naftalenos/metabolismo , Oxigenases/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Solubilidade
14.
Environ Microbiol ; 7(9): 1318-28, 2005 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-16104855

RESUMO

Enrichment and isolation of methyl chloride-utilizing bacteria from various terrestrial environments, including woodland and forest soils, resulted in the identification of seven methyl chloride-utilizing strains belonging to the genus Hyphomicrobium, an Aminobacter strain TW23 and strain WG1, which grouped closely with the genus Mesorhizobium. Methyl chloride enrichment cultures were dominated by Hyphomicrobium species, indicating that these bacteria were most suited to growth under the enrichment and isolation conditions used. However, the application of culture-independent techniques such as DNA-stable isotope probing and the use of a functional gene probe targeting cmuA, which encodes the methyltransferase catalysing the first step in bacterial methyl chloride metabolism, indicated a greater diversity of methyl chloride-utilizing bacteria in the terrestrial environment, compared with the diversity of soil isolates obtained via the enrichment and isolation procedure. It also revealed the presence of as yet uncultured and potentially novel methyl chloride-degrading bacteria in soil.


Assuntos
Variação Genética , Hyphomicrobium/genética , Cloreto de Metila/química , Methylobacterium/genética , Microbiologia do Solo , Proteínas de Bactérias/genética , Sequência de Bases , Biodegradação Ambiental , Isótopos de Carbono , Sondas de DNA/genética , DNA Bacteriano/genética , Genes Bacterianos , Hyphomicrobium/crescimento & desenvolvimento , Hyphomicrobium/isolamento & purificação , Methylobacterium/crescimento & desenvolvimento , Methylobacterium/isolamento & purificação , Metiltransferases/genética , Dados de Sequência Molecular , Filogenia
15.
Appl Environ Microbiol ; 70(7): 4177-86, 2004 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-15240299

RESUMO

The methylotrophic bacterium Hyphomicrobium chloromethanicum CM2 can utilize chloromethane (CH(3)Cl) as the sole carbon and energy source. Previously genes cmuB, cmuC, cmuA, and folD were shown to be essential for the growth of Methylobacterium chloromethanicum on CH(3)Cl. These CH(3)Cl-specific genes were subsequently detected in H. chloromethanicum. Transposon and marker exchange mutagenesis studies were carried out to identify the genes essential for CH(3)Cl metabolism in H. chloromethanicum. New developments in genetic manipulation of Hyphomicrobium are presented in this study. An electroporation protocol has been optimized and successfully applied for transformation of mutagenesis plasmids into H. chloromethanicum to generate stable CH(3)Cl-negative mutants. Both transposon and marker exchange mutageneses were highly applicable for genetic analysis of Hyphomicrobium. A reliable and reproducible selection procedure for screening of CH(3)Cl utilization-negative mutants has also been developed. Mutational inactivation of cmuB, cmuC, or hutI resulted in strains that were unable to utilize CH(3)Cl or to express the CH(3)Cl-dependent polypeptide CmuA. Reverse transcription-PCR analysis indicated that cmuB, cmuC, cmuA, fmdB, paaE, hutI, and metF formed a single cmuBCA-metF operon and were coregulated and coexpressed in H. chloromethanicum. This finding led to the conclusion that, in cmuB and cmuC mutants, impaired expression of cmuA was likely to be due to a polar effect of the defective gene (cmuB or cmuC) located upstream (5') of cmuA. The detrimental effect of mutation in hutI on the upstream (5')-located cmuA is not clear but indicated that all the genes located within the cmuBCA-metF operon are coordinately expressed. Expression of the cmuBCA-metF transcript was also shown to be strictly CH(3)Cl inducible and was not repressed by the alternative C(1) substrate methanol. Sequence analysis of a transposon mutant (D20) led to the discovery of the previously undetected hutI and metF genes located 3' of the paaE gene in H. chloromethanicum. MetF, a putative methylene-tetrahydrofolate reductase, had 27% identity to MetF from M. chloromethanicum. Mutational and transcriptional analysis data indicated that, in H. chloromethanicum, CH(3)Cl is metabolized via a corrinoid-specific (cmuA) and tetrahydrofolate-dependent (metF, purU, folD) methyltransfer system.


Assuntos
Genes Bacterianos , Hyphomicrobium/genética , Cloreto de Metila/metabolismo , Metiltransferases/genética , Família Multigênica , Sequência de Bases , Eletroporação , Hyphomicrobium/metabolismo , Dados de Sequência Molecular , Transcrição Gênica
16.
Arch Microbiol ; 177(2): 173-83, 2002 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-11807567

RESUMO

Novel methylotrophic Arthrobacter and Hyphomicrobium species are described. Constitutive membrane-associated dimethylsulfone- and dimethylsulfoxide-reductases were found in Arthrobacter methylotrophus strain TGA and Hyphomicrobium sulfonivorans strain S1. Enzyme activities increased during growth with dimethylsulfone or dimethylsulfoxide, respectively, and different ratios of activity with different growth substrates indicated that they are separate enzymes. SDS-PAGE showed some membrane-associated polypeptides to be enhanced during growth with dimethylsulfone (54 kDa in H. sulfonivorans, 21-24 kDa, 54 kDa and 80 kDa in A. methylotrophus). Western blotting with anti-dimethylsulfoxide-reductase antibody showed cross-reaction with 54- and 21-kDa polypeptides in A. methylotrophus. All strains contained rhodanese and sulfur oxygenase after growth with dimethylsulfone. Sulfite was oxidized in the Arthrobacter species by APS reductase and sulfite dehydrogenase. H. sulfonivorans oxidized sulfite with APS reductase, which is unusual for an alpha-proteobacterium. The Arthrobacter species were distinguished from each other and from other Arthrobacter and Micrococcus species by 16S rRNA gene sequence analysis. The menaquinone and fatty acid profiles of the Arthrobacter species were similar. Their peptidoglycan structures were L-Lys- L-Ser- L-Thr- L-Ala for A. sulfonivorans and L-Lys- L-Ala(2-4) for A. methylotrophus. H. sulfonivorans exhibited gross morphology typical for Hyphomicrobium, but possessed helically twisted prosthecae. 16S rRNA gene sequence analysis showed it to be distinct from all the other Hyphomicrobium, Filomicrobium and Pedomicrobium species sequenced to date. Formal descriptions of the new species are given.


Assuntos
Arthrobacter/enzimologia , Hyphomicrobium/enzimologia , Proteínas Ferro-Enxofre , NADH NADPH Oxirredutases/isolamento & purificação , Oxirredutases/isolamento & purificação , Sulfonas/metabolismo , Arthrobacter/classificação , Composição de Bases , DNA Bacteriano/química , Ácidos Graxos/análise , Hyphomicrobium/classificação , Dados de Sequência Molecular , Peptidoglicano/análise , Filogenia , Quinonas/análise
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