Detalhe da pesquisa
1.
WOMBAT-P: Benchmarking Label-Free Proteomics Data Analysis Workflows.
J Proteome Res
; 23(1): 418-429, 2024 01 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-38038272
2.
Retention Time and Fragmentation Predictors Increase Confidence in Identification of Common Variant Peptides.
J Proteome Res
; 22(10): 3190-3199, 2023 Oct 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-37656829
3.
Proline: an efficient and user-friendly software suite for large-scale proteomics.
Bioinformatics
; 36(10): 3148-3155, 2020 05 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-32096818
4.
The European Bioinformatics Community for Mass Spectrometry (EuBIC-MS): an open community for bioinformatics training and research.
Rapid Commun Mass Spectrom
; : e9087, 2021 Apr 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-33861485
5.
Comparing 22 Popular Phosphoproteomics Pipelines for Peptide Identification and Site Localization.
J Proteome Res
; 19(3): 1338-1345, 2020 03 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-31975593
6.
HDX-Viewer: interactive 3D visualization of hydrogen-deuterium exchange data.
Bioinformatics
; 35(24): 5331-5333, 2019 12 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-31287496
7.
Potential Plasticity of the Mannoprotein Repertoire Associated to Mycobacterium tuberculosis Virulence Unveiled by Mass Spectrometry-Based Glycoproteomics.
Molecules
; 25(10)2020 May 18.
Artigo
em Inglês
| MEDLINE | ID: mdl-32443484
8.
Good Vibrations: Structural Remodeling of Maturing Yeast Pre-40S Ribosomal Particles Followed by Cryo-Electron Microscopy.
Molecules
; 25(5)2020 Mar 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-32138239
9.
mzDB: a file format using multiple indexing strategies for the efficient analysis of large LC-MS/MS and SWATH-MS data sets.
Mol Cell Proteomics
; 14(3): 771-81, 2015 Mar.
Artigo
em Inglês
| MEDLINE | ID: mdl-25505153
10.
Label-free quantitative urinary proteomics identifies the arginase pathway as a new player in congenital obstructive nephropathy.
Mol Cell Proteomics
; 13(12): 3421-34, 2014 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-25205225
11.
Bacterial protein-O-mannosylating enzyme is crucial for virulence of Mycobacterium tuberculosis.
Proc Natl Acad Sci U S A
; 110(16): 6560-5, 2013 Apr 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-23550160
12.
Computational and Mass-Spectrometry-Based Workflow for the Discovery and Validation of Missing Human Proteins: Application to Chromosomes 2 and 14.
J Proteome Res
; 14(9): 3621-34, 2015 Sep 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-26132440
13.
Label-free quantification and shotgun analysis of complex proteomes by one-dimensional SDS-PAGE/NanoLC-MS: evaluation for the large scale analysis of inflammatory human endothelial cells.
Mol Cell Proteomics
; 11(8): 527-39, 2012 Aug.
Artigo
em Inglês
| MEDLINE | ID: mdl-22518033
14.
Quantitative proteomic analysis to decipher the differential apoptotic response of bortezomib-treated APL cells before and after retinoic acid differentiation reveals involvement of protein toxicity mechanisms.
Proteomics
; 13(1): 37-47, 2013 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-23135970
15.
Proteomic analysis of chloroplast-to-chromoplast transition in tomato reveals metabolic shifts coupled with disrupted thylakoid biogenesis machinery and elevated energy-production components.
Plant Physiol
; 160(2): 708-25, 2012 Oct.
Artigo
em Inglês
| MEDLINE | ID: mdl-22908117
16.
Validation of MS/MS Identifications and Label-Free Quantification Using Proline.
Methods Mol Biol
; 2426: 67-89, 2023.
Artigo
em Inglês
| MEDLINE | ID: mdl-36308685
17.
In-depth exploration of cerebrospinal fluid by combining peptide ligand library treatment and label-free protein quantification.
Mol Cell Proteomics
; 9(5): 1006-21, 2010 May.
Artigo
em Inglês
| MEDLINE | ID: mdl-20093276
18.
A comprehensive LFQ benchmark dataset on modern day acquisition strategies in proteomics.
Sci Data
; 9(1): 126, 2022 03 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-35354825
19.
Quantitative proteomics reveals a dynamic association of proteins to detergent-resistant membranes upon elicitor signaling in tobacco.
Mol Cell Proteomics
; 8(9): 2186-98, 2009 Sep.
Artigo
em Inglês
| MEDLINE | ID: mdl-19525550
20.
Isoginkgetin derivative IP2 enhances the adaptive immune response against tumor antigens.
Commun Biol
; 4(1): 269, 2021 03 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-33649389