Detalhe da pesquisa
1.
Low-Affinity Binding Sites and the Transcription Factor Specificity Paradox in Eukaryotes.
Annu Rev Cell Dev Biol
; 35: 357-379, 2019 10 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-31283382
2.
Deconvolving the recognition of DNA shape from sequence.
Cell
; 161(2): 307-18, 2015 Apr 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-25843630
3.
PQM-1 complements DAF-16 as a key transcriptional regulator of DAF-2-mediated development and longevity.
Cell
; 154(3): 676-690, 2013 Aug 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-23911329
4.
Context-Dependent Gene Regulation by Homeodomain Transcription Factor Complexes Revealed by Shape-Readout Deficient Proteins.
Mol Cell
; 78(1): 152-167.e11, 2020 04 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-32053778
5.
Cofactor binding evokes latent differences in DNA binding specificity between Hox proteins.
Cell
; 147(6): 1270-82, 2011 Dec 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-22153072
6.
Systematic protein location mapping reveals five principal chromatin types in Drosophila cells.
Cell
; 143(2): 212-24, 2010 Oct 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-20888037
7.
Defining the fine structure of promoter activity on a genome-wide scale with CISSECTOR.
Nucleic Acids Res
; 51(11): 5499-5511, 2023 06 23.
Artigo
em Inglês
| MEDLINE | ID: mdl-37013986
8.
Optimisation of TP53 reporters by systematic dissection of synthetic TP53 response elements.
Nucleic Acids Res
; 51(18): 9690-9702, 2023 Oct 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-37650627
9.
Transcription factor regulation of eQTL activity across individuals and tissues.
PLoS Genet
; 18(1): e1009719, 2022 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-35100260
10.
Systematic in vitro profiling of off-target affinity, cleavage and efficiency for CRISPR enzymes.
Nucleic Acids Res
; 48(9): 5037-5053, 2020 05 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-32315032
11.
SelexGLM differentiates androgen and glucocorticoid receptor DNA-binding preference over an extended binding site.
Genome Res
; 28(1): 111-121, 2018 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-29196557
12.
Accurate and sensitive quantification of protein-DNA binding affinity.
Proc Natl Acad Sci U S A
; 115(16): E3692-E3701, 2018 04 17.
Artigo
em Inglês
| MEDLINE | ID: mdl-29610332
13.
Nuclear pore component Nup98 is a potential tumor suppressor and regulates posttranscriptional expression of select p53 target genes.
Mol Cell
; 48(5): 799-810, 2012 Dec 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-23102701
14.
A unified approach for quantifying and interpreting DNA shape readout by transcription factors.
Mol Syst Biol
; 14(2): e7902, 2018 02 22.
Artigo
em Inglês
| MEDLINE | ID: mdl-29472273
15.
Identifying genetic modulators of the connectivity between transcription factors and their transcriptional targets.
Proc Natl Acad Sci U S A
; 113(13): E1835-43, 2016 Mar 29.
Artigo
em Inglês
| MEDLINE | ID: mdl-26966232
16.
Quantitative modeling of transcription factor binding specificities using DNA shape.
Proc Natl Acad Sci U S A
; 112(15): 4654-9, 2015 Apr 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-25775564
17.
DSSR: an integrated software tool for dissecting the spatial structure of RNA.
Nucleic Acids Res
; 43(21): e142, 2015 Dec 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-26184874
18.
Identifying regulatory mechanisms underlying tumorigenesis using locus expression signature analysis.
Proc Natl Acad Sci U S A
; 111(15): 5747-52, 2014 Apr 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-24706889
19.
Probing DNA shape and methylation state on a genomic scale with DNase I.
Proc Natl Acad Sci U S A
; 110(16): 6376-81, 2013 Apr 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-23576721
20.
TLS/FUS (translocated in liposarcoma/fused in sarcoma) regulates target gene transcription via single-stranded DNA response elements.
Proc Natl Acad Sci U S A
; 109(16): 6030-5, 2012 Apr 17.
Artigo
em Inglês
| MEDLINE | ID: mdl-22460799