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1.
J Exp Med ; 199(10): 1367-77, 2004 May 17.
Artigo em Inglês | MEDLINE | ID: mdl-15136590

RESUMO

Human T lymphocyte virus type I (HTLV-I)-associated chronic inflammatory neurological disease (HTLV-I-associated myelopathy/tropical spastic paraparesis [HAM/TSP]) is suggested to be an immunopathologically mediated disorder characterized by large numbers of HTLV-I Tax-specific CD8+ T cells. The frequency of these cells in the peripheral blood and cerebrospinal fluid is proportional to the amount of HTLV-I proviral load and the levels of HTLV-I tax mRNA expression. As the stimulus for these virus-specific T cells are immunodominant peptide-human histocompatibility leukocyte antigen (HLA) complexes expressed on antigen-presenting cells, it was of interest to determine which cells express these complexes and at what frequency. However, until now, it has not been possible to identify and/or quantify these peptide-HLA complexes. Using a recently developed antibody that specifically recognizes Tax11-19 peptide-HLA-A*201 complexes, the level of Tax11-19-HLA-A*201 expression on T cells was demonstrated to be increased in HAM/TSP and correlated with HTLV-I proviral DNA load, HTLV-I tax mRNA load, and HTLV-I Tax-specific CD8+ T cell frequencies. Furthermore, CD4+ CD25+ T cells were demonstrated to be the major reservoir of HTLV-I provirus as well as Tax11-19 peptide-HLA-A*201 complexes. These results indicate that the increased detection and visualization of peptide-HLA complexes in HAM/TSP CD4+ CD25+ T cell subsets that are shown to stimulate and expand HTLV-I Tax-specific CD8+ T cells may play an important role in the pathogenesis of HTLV-I-associated neurological disease.


Assuntos
Produtos do Gene tax/imunologia , Antígenos HLA-A/imunologia , Infecções por HTLV-I/imunologia , Vírus Linfotrópico T Tipo 1 Humano/imunologia , Doenças do Sistema Nervoso/imunologia , Linfócitos T/imunologia , Antígenos CD/imunologia , Linfócitos B/imunologia , Antígenos CD4/imunologia , Linhagem Celular , Citometria de Fluxo , Vírus Linfotrópico T Tipo 1 Humano/genética , Humanos , Complexo Principal de Histocompatibilidade , Doenças do Sistema Nervoso/virologia , Fragmentos de Peptídeos/genética , Receptores de Interleucina-2/imunologia
2.
J Card Surg ; 24(4): 472-4, 2009.
Artigo em Inglês | MEDLINE | ID: mdl-19210553

RESUMO

Cardiac intracavitary metastasis is very uncommon. In a 55-year-old man presenting with a massive pulmonary embolism pattern, transthoracic echocardiography (TTE) allowed us to visualize an isolated right ventricular metastasis extended into the pulmonary trunk. It led to the discovery of a primary testis embryonal carcinoma. No intracaval and right atrial localization was observed. Despite an urgent complete cardiac metastasis resection and concomitant orchidectomy, TTE showed on postoperative day 6 an uncommon total intracardiac regrowth spreading again to the pulmonary trunk. Combination chemotherapy (etoposide, cisplatin, and bleomycin) was immediately undertaken. This is the first well-documented case of an isolated right ventricular germ-cell cancer metastasis extended into the pulmonary trunk, without intracaval and right atrial involvement, where the outcome was marked with immediate regrowth despite cardiac surgery and orchidectomy. In conclusion, TTE should be considered alongside germ-cell cancer standard staging procedures.


Assuntos
Carcinoma Embrionário/patologia , Carcinoma Embrionário/secundário , Neoplasias Cardíacas/secundário , Ventrículos do Coração/patologia , Embolia Pulmonar/diagnóstico por imagem , Carcinoma Embrionário/terapia , Ponte Cardiopulmonar , Quimioterapia Adjuvante , Ecocardiografia , Emergências , Neoplasias Cardíacas/terapia , Ventrículos do Coração/cirurgia , Humanos , Masculino , Pessoa de Meia-Idade , Invasividade Neoplásica , Orquiectomia , Valva Pulmonar/patologia , Valva Pulmonar/cirurgia , Neoplasias Testiculares/patologia , Neoplasias Testiculares/terapia , Obstrução do Fluxo Ventricular Externo/etiologia
3.
Cancer Res ; 62(20): 5835-44, 2002 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-12384546

RESUMO

The recent characterization of MHC-displayed tumor-associated antigens that recognize effector cells of the immune system has created new perspectives for cancer therapy. Antibodies that recognize these tumor-associated MHC-peptide complexes with the same specificity as the T-cell antigen receptor will therefore be valuable tools for immunotherapy, as well as for studying antigen presentation in human cancers. Most tumor-associated antigens are expressed in only one or a few tumor types; however, specific T-cell epitopes derived from the Mucin-1 tumor-associated antigen (MUC1) that are widely expressed in many cancers were identified and shown to be recognized by CTLs. We selected a large nonimmune repertoire of phage Fab antibodies on recombinant human class I HLA-A2 complexes displaying an antigenic T-cell epitope derived from MUC1. High frequency of anti-MHC-peptide binders was observed (84%), and surprisingly, a high percentage (80%) of antibodies was fully specific for the MUC1 epitope. We isolated a surprisingly large panel of 16 different high-affinity human recombinant Fab antibodies that exhibited peptide-specific, MHC-restricted binding characteristics of T cells. The analyzed Fabs not only recognize the cognate MHC-peptide complex in a recombinant soluble form but also the native complex as displayed on the surface of antigen-presenting cells and breast tumor cells. Therefore, these findings demonstrate the ability to transform the unique fine specificity but low intrinsic affinity of T-cell receptors on T cells into high-affinity soluble antibody molecules endowed with a T-cell antigen receptor-like specificity. These molecules may prove to be very important and widely applicable for monitoring the expression of specific MHC-peptide complexes on the surface of tumor and immune cells for structure-function studies of T-cell receptor-peptide-MHC interactions, as well as for developing new targeting agents for immunotherapy.


Assuntos
Anticorpos Antineoplásicos/imunologia , Epitopos de Linfócito T/imunologia , Mucina-1/imunologia , Linfócitos T/imunologia , Anticorpos Antineoplásicos/isolamento & purificação , Afinidade de Anticorpos , Especificidade de Anticorpos , Células Apresentadoras de Antígenos/imunologia , Ligação Competitiva , Neoplasias da Mama/imunologia , Células Epiteliais/imunologia , Epitopos de Linfócito T/análise , Antígeno HLA-A2/imunologia , Antígeno HLA-A2/metabolismo , Humanos , Fragmentos de Imunoglobulinas/imunologia , Mucina-1/metabolismo , Oligopeptídeos/imunologia , Receptores de Antígenos de Linfócitos T/imunologia , Proteínas Recombinantes/imunologia , Proteínas Recombinantes/isolamento & purificação
4.
Cancer Res ; 62(11): 3184-94, 2002 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-12036932

RESUMO

The recent characterization of MHC-displayed tumor-associated antigensthat recognize effector cells of the immune system has created new perspectives for cancer therapy. Antibodies that recognize these tumor-associated MHC-peptide complexes with the same specificity as the T-cell antigen receptor will therefore be valuable tools for immunotherapy as well as for studying antigen presentation in human cancers. Most tumor-associated antigens are expressed in only one or a few tumor types; however, recently specific T-cell epitopes derived from the telomerase catalytic subunit (hTERT) that are widely expressed in many cancers were identified and shown to be recognized by CTLs derived from cancer patients. We selected a large nonimmune repertoire of phage Fab antibodies on recombinant human class I HLA-A2 complexes displaying two distinct antigenic T-cell epitopes derived from hTERT. We isolated a surprisingly large panel of high-affinity human recombinant Fab antibodies that exhibited peptide-specific, MHC-restricted binding characteristics of T cells. The analyzed Fabs not only recognize the cognate MHC-peptide complex in a recombinant soluble form but also the native complex as displayed on the surface of antigen-presenting cells and hTERT-expressing tumor cells. These findings demonstrate for the first time the ability to transform the unique fine specificity but low intrinsic affinity of TCRs on T cells into high-affinity soluble antibody molecules endowed with a T-cell antigen receptor-like specificity. These molecules may prove to be very important and widely applicable for monitoring the expression of specific MHC-peptide complexes on the surface of tumor and immune cells, for structure-function studies of TCR-peptide-MHC interactions, as well as for developing new targeting agents for immunotherapy.


Assuntos
Epitopos de Linfócito T/imunologia , Antígeno HLA-A2/imunologia , Fragmentos de Imunoglobulinas/imunologia , Linfócitos T/imunologia , Telomerase/imunologia , Animais , Especificidade de Anticorpos , Células Apresentadoras de Antígenos/imunologia , Proteínas de Ligação a DNA , Citometria de Fluxo , Antígeno HLA-A2/genética , Antígeno HLA-A2/metabolismo , Humanos , Fragmentos de Imunoglobulinas/genética , Fragmentos de Imunoglobulinas/isolamento & purificação , Fragmentos de Imunoglobulinas/metabolismo , Camundongos , Receptores de Antígenos de Linfócitos T/imunologia , Receptores de Antígenos de Linfócitos T/metabolismo , Proteínas Recombinantes/imunologia , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/metabolismo , Transfecção
5.
J Immunol Methods ; 277(1-2): 39-52, 2003 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-12799038

RESUMO

The recent advent of peptide-MHC tetramers has provided a new and effective tool for studying antigen-specific T cell populations through monitoring tetramer binding to T cells by flow cytometry. Yet information regarding T cell activation induced by the bound tetramers cannot be deduced from binding studies alone; complementary methods are needed to bridge this gap. To this end, we have developed a new approach that now enables monitoring both binding to and activation of T cells by peptide-MHC tetramers at the single-cell level. For this purpose, we have employed the CellScan, a non-flow cytometer designed for repetitive measurements of optical parameters (e.g., fluorescence intensity and polarization) of individual living cells. A melanoma-specific MART1 CTL line and a gp100-specific CTL clone were incubated with specific and control single-chain peptide-MHC tetramers for 45 min. Subsequently, the fluorescence intensity and polarization were measured by the CellScan. Specific binding of fluorescently labeled peptide-MHC tetramers to CTLs, recorded by the CellScan, was comparable to that measured by flow cytometry. CellScan monitoring of the degree of fluorescence polarization of fluorescein diacetate-labeled CTLs that were reacted with tetramers revealed specific activation of the CTLs, which was confirmed by cytokine (INF gamma) production. These results provide a new means of monitoring both the binding to and activation of T lymphocytes by cognate peptide-MHC complexes at the single-cell level, which can now be applied to distinguish between cognate responding and anergic T cells.


Assuntos
Polarização de Fluorescência/métodos , Complexo Principal de Histocompatibilidade/imunologia , Linfócitos T/imunologia , Epitopos de Linfócito T/imunologia , Epitopos de Linfócito T/metabolismo , Polarização de Fluorescência/instrumentação , Humanos , Interferon gama/imunologia , Interferon gama/metabolismo , Cinética , Ativação Linfocitária/imunologia , Melanoma/imunologia , Melanoma/metabolismo , Peptídeos/imunologia , Peptídeos/metabolismo , Linfócitos T/metabolismo , Células Tumorais Cultivadas
8.
Presse Med ; 38(6): 987-94, 2009 Jun.
Artigo em Francês | MEDLINE | ID: mdl-19423276

RESUMO

Anthracycline-based antineoplastic therapy is the standard of care for various cancers today and represents a breakthrough in this area. The cardiac toxicity of anthracyclines is well established. The acute form is often reversible and has no predictive value for the future. This early form does not prevent continuation of chemotherapy. Late cardiac toxicity due to anthracycline is the leading limiting factor in its use. In adults, this resembles dilated cardiomyopathy, while in children it may be expressed as restrictive cardiomyopathy. The discovery of modifiable risk factors has made it possible to identify patients at high risk of developing late cardiac toxicity and heart failure. Because left ventricular dysfunction and heart failure may develop long after anthracycline treatment ends, prolonged close follow-up is mandatory in asymptomatic subjects. Follow-up of asymptomatic patients requires serial echocardiography (M-mode, 2D echo, Doppler, tissue Doppler, speckle tracking, etc.). Anthracycline-induced cardiomyopathy must be treated according to the standard guidelines for chronic heart failure with left ventricular dysfunction, by angiotensin-converting enzyme (ACE) inhibitors and beta-blockers. Lifestyle changes may reduce the long-term risk. Close collaboration between cardiologists and oncologists is highly desirable for optimizing management of these patients.


Assuntos
Antraciclinas/efeitos adversos , Antibióticos Antineoplásicos/efeitos adversos , Cardiomiopatias/induzido quimicamente , Doença Aguda , Antagonistas Adrenérgicos beta/uso terapêutico , Assistência ao Convalescente , Inibidores da Enzima Conversora de Angiotensina/uso terapêutico , Biópsia , Cardiologia , Cardiomiopatias/diagnóstico , Cardiomiopatias/epidemiologia , Cardiomiopatias/prevenção & controle , Doença Crônica , Monitoramento de Medicamentos , Ecocardiografia , Eletrocardiografia , Insuficiência Cardíaca/induzido quimicamente , Humanos , Estilo de Vida , Oncologia , Equipe de Assistência ao Paciente , Guias de Prática Clínica como Assunto , Medição de Risco , Fatores de Risco , Comportamento de Redução do Risco , Disfunção Ventricular Esquerda/induzido quimicamente
9.
Cancer Res ; 68(15): 6360-7, 2008 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-18676861

RESUMO

In this study, we have explored the use of Fab-toxin proteins (immunotoxin) to target antigen-specific MHC-peptide complexes of in vitro and in vivo cancer cells. A human phage display library was used to screen for T-cell receptor (TCR)-like antibodies that are highly specific for the peptide melanoma-associated antigen MART-1(26-35) presented by HLA-A201. We also used previously selected TCR-like antibodies specific for the peptide melanoma-associated antigen gp100(280-288) presented by HLA-A201. The recombinant immunotoxin constructs were generated by fusing the targeting Fab fragment to a truncated form of Pseudomonas exotoxin, PE38KDEL. These immunotoxins bound with high affinity to the EBV-transformed JY cell line pulsed with the aforementioned peptides and internalized within 30 min. A significant inhibition of protein synthesis, which resulted in cell death, was detected at 24 h. MART-1-specific and gp100-specific immunotoxins bound and killed HLA-A201 melanoma MART-1(+) and gp100(+) cell lines that were presented at natural levels but do not bind to HLA-A201(-) or to HLA-A201(+) MART-1(-) and gp100(-) cell lines. In severe combined immunodeficient mice, MART-1 and gp100 immunotoxins significantly and discriminately inhibited human melanoma growth. These results show that MHC class I/peptide complexes can serve as a specific target for passive immunotherapy of cancer.


Assuntos
Antineoplásicos/farmacologia , Imunotoxinas/farmacologia , Melanoma/imunologia , Receptores de Antígenos de Linfócitos T/imunologia , Animais , Ensaio de Imunoadsorção Enzimática , Humanos , Camundongos , Camundongos Endogâmicos NOD , Camundongos SCID , Proteínas Recombinantes/imunologia , Transplante Heterólogo
10.
Int Immunol ; 18(12): 1647-54, 2006 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-17035346

RESUMO

Dendritic cells (DCs) play a key role in the induction of cellular immune responses by harvesting antigens from peripheral tissue for cross-priming CD8(+) T cells. It has been demonstrated that apoptotic bodies, whole- or degraded-cell-associated or soluble antigens as well as heat shock protein-bound peptides can be taken up, processed and cross-presented by DCs. Since cells are continuously releasing peptides from their surface MHC molecules, DCs in the tissues are exposed to such peptides and might process and present them to T cells as an additional pathway for cross-priming. To investigate this possibility, we compared and characterized the presentation of exogenous peptides by DCs and other cell types employing novel recombinant antibodies with TCR-like specificities for specific peptide-MHC complexes (pMHCs). These analyses reveal that loading of immature and mature DCs with peptide is far less efficient than it is for monocytes, T and B lymphocytes, B-lymphoblastoid, melanoma and TAP-deficient T2 cells. This inefficiency of peptide transfer to the MHC molecules of DCs makes it unlikely that these cells recycle peptides released from the MHC molecules of other cells and may explain why cross-presentation of such peptides has not yet been observed.


Assuntos
Apresentação de Antígeno , Apresentação Cruzada/imunologia , Células Dendríticas/imunologia , Peptídeos/imunologia , Linfócitos T/imunologia , Sequência de Aminoácidos , Linfócitos B/imunologia , Linhagem Celular Tumoral , Antígenos HLA-A , Antígeno HLA-A2 , Humanos , Complexo Principal de Histocompatibilidade , Melanoma/imunologia , Dados de Sequência Molecular , Monócitos/imunologia , Peptídeos/síntese química , Peptídeos/química
11.
Eur J Immunol ; 34(6): 1551-60, 2004 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-15162424

RESUMO

Dendritic cells are known as the most potent antigen-presenting cells for the induction of T cell-mediated immune responses. To discriminate between the presentation of antigens and the co-stimulatory aspects of this high immunostimulatory capacity, we used recombinant antibodies with T cell receptor-like specificity to detect defined MHC-peptide complexes on living cells. Mature human dendritic cells (mDC) were compared with immature DC (iDC), monocytes, CD4(+) T lymphocytes, melanoma cells, T2 cells and B lymphoblastoid cells for their capacity to present MHC class I-restricted tumor-associated T cell epitopes and were found to display the specific peptides two to six times longer than other cells. The most short-lived peptide had an average half-life of 8.7 h on mDCvs. 3.5 h on B lymphoblastoid cells, while the most long-lived peptide had a half-life of 118.5 h vs. 20.7 h on these two cell types. The decay kinetics of specific MHC-peptide complexes on iDC were among the fastest observed. The high potency of dendritic cells to induce specific T cell responses is thus based, in addition to the expression of co-stimulatory molecules, on an extended antigenic memory, which increases the likelihood and the extent of contacts between dendritic cells and antigen-specific T cells.


Assuntos
Apresentação de Antígeno/imunologia , Células Dendríticas/imunologia , Antígenos HLA-A/imunologia , Receptores de Antígenos de Linfócitos T/imunologia , Linfócitos B/imunologia , Linfócitos T CD4-Positivos/imunologia , Linhagem Celular Tumoral/imunologia , Membrana Celular/imunologia , Epitopos/imunologia , Humanos , Cinética , Microscopia Confocal , Monócitos/imunologia , Fragmentos de Peptídeos/imunologia , Proteínas Recombinantes/imunologia , Azida Sódica
12.
J Mol Recognit ; 16(5): 324-32, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14523945

RESUMO

The advent in recent years of the application of tetrameric arrays of class I peptide-MHC complexes now enables us to detect and study rare populations of antigen-specific CD8+ T cells. However, available methods cannot visualize or determine the number and distribution of these TCR ligands on individual cells or detect antigen-presenting cells (APCs) in tissues. Here we describe a new approach that enables study of human class I peptide-MHC ligand-presentation as well as TCR-peptide-MHC interactions. Such studies are facilitated by applying novel tools in the form of peptide-specific, HLA-A2-restricted human recombinant antibodies directed toward a large variety of tumor-associated as well as viral T-cell epitope peptides. Using a large human antibody phage display library, a large panel of recombinant antibodies that are specific for a particular peptide-MHC class I complex in a peptide-dependent, MHC-restricted manner was isolated. These antibodies were used to directly visualize the specific MHC-peptide complex on tumor cells, antigen-presenting cells or virus-infected cells by flow cytometry. They enabled direct quantitation of the number of MHC-peptide complexes as well as in situ detection of the complex on the surface of APCs after naturally occurring active intracellular processing of the cognate antigen. These studies will enable also the development of a new class of targeting molecules to deliver drugs or toxins to tumor or virus-infected cells. Thus, we demonstrate our ability to transform the unique fine specificity but low intrinsic affinity of TCRs into high-affinity soluble antibody molecules endowed with a TCR-like specificity toward human tumor or viral epitopes. These molecules may prove to be crucial useful tools for studying MHC class I antigen presentation in health and disease as well as for therapeutic purposes in cancer, infectious diseases and autoimmune disorders.


Assuntos
Anticorpos/imunologia , Complexo Principal de Histocompatibilidade , Peptídeos/imunologia , Proteínas Recombinantes/imunologia , Animais , Apresentação de Antígeno/imunologia , Humanos , Receptores de Antígenos de Linfócitos T/imunologia , Relação Estrutura-Atividade
13.
Acta Crystallogr D Biol Crystallogr ; 58(Pt 9): 1474-5, 2002 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-12198306

RESUMO

Cpn60-2 is a member of a unique family of putative molecular chaperones homologous to GroEL (Cpn60) but of unknown function and found only in Mycobacterium tuberculosis and closely related species. Cpn60-2 has mainly been studied for its strong immunogenity. Here, the purification, crystallization and preliminary crystallographic analysis of M. tuberculosis Cpn60-2 are reported. The crystals belong to space group P2, with unit-cell parameters a = 57, b = 115.5, c = 81.5 A, beta = 95.5 degrees, and contain a dimer in the asymmetric unit. The crystals diffract to 4.0 A using a Cu rotating-anode X-ray generator.


Assuntos
Chaperonina 60/isolamento & purificação , Mycobacterium tuberculosis/química , Chaperonina 60/química , Cromatografia Líquida , Cristalografia por Raios X , Conformação Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/isolamento & purificação
14.
Proc Natl Acad Sci U S A ; 99(14): 9421-6, 2002 Jul 09.
Artigo em Inglês | MEDLINE | ID: mdl-12093904

RESUMO

Specificity in the cellular immune system is controlled and regulated by the T cell antigen receptor (TCR), which specifically recognizes peptide/major histocompatibility complex (MHC) molecules. In recent years many cancer-associated MHC-restricted peptides have been isolated and because of their highly restricted fine specificity, they are desirable targets for novel approaches in immunotherapy. Antibodies that would recognize tumor-associated MHC-peptide complexes with the same specificity as the TCR would be valuable reagents for studying antigen presentation by tumor cells, for visualizing MHC-peptide complexes on cells, and eventually for monitoring the expression of specific complexes during immunotherapy. To generate molecules with such a unique fine specificity, we selected a large nonimmune repertoire of phage Fab antibodies on recombinant HLA-A2 complexed with three common antigenic T cell, HLA-A2-restricted epitopes derived from the melanoma differentiation antigen gp100. We were able to isolate a surprisingly large panel of human recombinant Fab antibodies that exhibit a characteristic TCR-like binding specificity to each of the three gp100-derived epitopes, yet unlike TCRs, they did so with an affinity in the nanomolar range. These TCR-like antibodies recognize the native MHC-peptide complex expressed on the surface of antigen-presenting cells. Moreover, they can detect the specific MHC-peptide complexes on the surface of melanoma tumor cells. These results demonstrate the ability to isolate high-affinity human recombinant antibodies with the antigen-specific, MHC-restricted specificity of T cells, and this ability was demonstrated for three different epitopes of the same melanoma-derived antigen.


Assuntos
Anticorpos Antineoplásicos/metabolismo , Glicoproteínas de Membrana/metabolismo , Proteínas de Neoplasias/metabolismo , Linfócitos T/imunologia , Sequência de Aminoácidos , Especificidade de Anticorpos , Células Apresentadoras de Antígenos/imunologia , Epitopos/genética , Epitopos/metabolismo , Antígeno HLA-A2/metabolismo , Humanos , Fragmentos Fab das Imunoglobulinas/genética , Fragmentos Fab das Imunoglobulinas/metabolismo , Técnicas In Vitro , Melanoma/imunologia , Glicoproteínas de Membrana/genética , Proteínas de Neoplasias/genética , Receptores de Antígenos de Linfócitos T/metabolismo , Proteínas Recombinantes/imunologia , Proteínas Recombinantes/metabolismo , Solubilidade , Antígeno gp100 de Melanoma
15.
Hum Genet ; 115(3): 213-20, 2004 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-15232733

RESUMO

Short, tandemly repeated DNA motifs, termed SSRs (simple sequence repeats) are widely distributed throughout eukaryotic genomes and exhibit a high degree of polymorphism. The availability of size-based methods for genotyping SSRs has made them the markers of choice for genetic linkage studies in all higher eukaryotes. These genotyping methods are not efficiently applicable to mononucleotide repeats (MNRs). Consequently, MNRs, although highly frequent in the genome, have generally been ignored as genetic markers. In contrast to single nucleotide polymorphisms (SNPs), SSRs can be identified in silico once the genomic sequence or segment of interest is available, without requiring any additional information. This makes possible ad-hoc saturation of a target chromosomal region with informative markers. In this context, MNRs appear to have much to offer by increasing the degree of marker saturation that can be obtained. By using the human genome sequence as a model, computational analysis demonstrates that MNRs in the size of 9-15 bp are highly abundant, with an average appearance every 2.9 kb, exceeding di- and tri-nucleotide SSRs frequencies by two- and five-fold, respectively. In order to enable practical, high throughput MNR genotyping, a rapid method was developed, based on sizing of fluorescent-labeled primer extension products. Genotyping of 16 arbitrarily chosen non-coding MNR sites along human chromosome 22 revealed that almost two-thirds (63%) of them were polymorphic, having 2-5 alleles per locus, with 20% of the polymorphic MNRs having more than two alleles. Thus, MNRs have potential for in silico saturation of sequenced eukaryote genomes with informative genetic markers.


Assuntos
Mapeamento Cromossômico/métodos , Marcadores Genéticos , Repetições Minissatélites/genética , Polimorfismo Genético , Biologia Computacional , Genótipo , Humanos , Sensibilidade e Especificidade , Análise de Sequência de DNA
16.
J Immunol ; 170(8): 4349-61, 2003 Apr 15.
Artigo em Inglês | MEDLINE | ID: mdl-12682272

RESUMO

The advent in recent years of the application of tetrameric arrays of class I peptide-MHC complexes now enables us to detect and study rare populations of Ag-specific CD8(+) T cells. However, available methods cannot visualize or determine the number and distribution of these TCR ligands on individual cells nor detect APCs in tissues. In this study, we describe for the first time studies of human class I peptide-MHC ligand presentation. These studies were facilitated by applying novel tools in the form of peptide-specific, HLA-A2-restricted human recombinant Abs directed toward a viral epitope derived from human T cell lymphotropic virus type I. Using a large human Ab phage display library, we isolated a large panel of recombinant Fab Abs that are specific for a particular peptide-MHC class I complex in a peptide-dependent, MHC-restricted manner. We used these Abs to visualize the specific complex on APCs and virus-infected cells by flow cytometry, to quantify the number of, and visualize in situ, a particular complex on the surface of APCs bearing complexes formed by naturally occurring active intracellular processing of the cognate viral Ag. These findings demonstrate our ability to transform the unique fine specificity, but low intrinsic affinity of TCRs into high affinity soluble Ab molecules endowed with a TCR-like specificity toward human viral epitopes. These molecules may prove to be crucial useful tools for studying MHC class I Ag presentation in health and disease as well as for therapeutic purposes in cancer, infectious diseases, and autoimmune disorders.


Assuntos
Apresentação de Antígeno/imunologia , Epitopos de Linfócito T/imunologia , Produtos do Gene tax/imunologia , Antígeno HLA-A2/análise , Vírus Linfotrópico T Tipo 1 Humano/imunologia , Fragmentos Fab das Imunoglobulinas/metabolismo , Imunofenotipagem/métodos , Fragmentos de Peptídeos/imunologia , Sequência de Aminoácidos , Afinidade de Anticorpos , Especificidade de Anticorpos , Células Apresentadoras de Antígenos/imunologia , Células Apresentadoras de Antígenos/metabolismo , Sítios de Ligação de Anticorpos , Ligação Competitiva/imunologia , Linhagem Celular , Linhagem Celular Transformada , Membrana Celular/imunologia , Membrana Celular/metabolismo , Epitopos de Linfócito T/metabolismo , Produtos do Gene tax/metabolismo , Antígeno HLA-A2/imunologia , Antígeno HLA-A2/metabolismo , Humanos , Líquido Intracelular/imunologia , Líquido Intracelular/metabolismo , Ligantes , Dados de Sequência Molecular , Fragmentos de Peptídeos/metabolismo , Receptores de Antígenos de Linfócitos T/imunologia , Receptores de Antígenos de Linfócitos T/metabolismo , Proteínas Recombinantes/imunologia , Proteínas Recombinantes/metabolismo , Subpopulações de Linfócitos T/imunologia , Subpopulações de Linfócitos T/metabolismo , Subpopulações de Linfócitos T/virologia , Linfócitos T Citotóxicos/imunologia , Linfócitos T Citotóxicos/metabolismo , Linfócitos T Citotóxicos/virologia , Células Tumorais Cultivadas
17.
J Immunol ; 171(6): 3064-74, 2003 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-12960332

RESUMO

Both TCRs and Ab molecules are capable of MHC-restricted recognition of peptide/MHC complexes. However, such MHC restriction is the predominant mode of recognition by T cells, but is extremely rare for B cells. The present study asks whether the dichotomy in Ag recognition modes of T and B cells could be due to fundamental differences in the methods by which TCRs and Abs recognize peptide/MHC complexes. We have compared MHC and peptide recognition by panels of CTL lines specific for the Tax and M1 peptides presented by HLA-A2 plus Tax and M1 peptide/HLA-A2-specific human Fabs that were selected from a naive phage display library. Collectively, the results indicate both striking similarities and important differences between Fab and TCR recognition of MHC and peptide components of the Tax and M1/HLA-A2 complexes. These findings suggest that these two classes of immunoreceptors have solved the problem of specific recognition of peptide/MHC complexes by nonidentical mechanisms. This conclusion is important in part because it indicates that Ab engineering approaches could produce second-generation Ab molecules that more closely mimic TCR fine specificity. Such efforts may produce more efficacious diagnostic and therapeutic agents.


Assuntos
Especificidade de Anticorpos , Epitopos de Linfócito T/metabolismo , Produtos do Gene tax/imunologia , Antígeno HLA-A2/imunologia , Fragmentos Fab das Imunoglobulinas/metabolismo , Fragmentos de Peptídeos/imunologia , Receptores de Antígenos de Linfócitos T/metabolismo , Proteínas da Matriz Viral/imunologia , Substituição de Aminoácidos/genética , Substituição de Aminoácidos/imunologia , Apresentação de Antígeno , Linhagem Celular , Epitopos de Linfócito T/imunologia , Produtos do Gene tax/química , Produtos do Gene tax/metabolismo , Antígeno HLA-A2/química , Antígeno HLA-A2/genética , Antígeno HLA-A2/metabolismo , Vírus Linfotrópico T Tipo 1 Humano/imunologia , Humanos , Ligantes , Substâncias Macromoleculares , Fragmentos de Peptídeos/química , Fragmentos de Peptídeos/metabolismo , Linfócitos T Citotóxicos/imunologia , Linfócitos T Citotóxicos/metabolismo , Transfecção , Proteínas da Matriz Viral/química , Proteínas da Matriz Viral/metabolismo
18.
J Immunol ; 168(12): 6463-9, 2002 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-12055266

RESUMO

Adjuvant arthritis (AA) is an experimental model of autoimmune arthritis that can be induced in susceptible strains of rats such as inbred Lewis upon immunization with CFA. AA cannot be induced in resistant strains like Brown-Norway or in Lewis rats after recovery from arthritis. We have previously shown that resistance to AA is due to the presence of natural as well as acquired anti-heat shock protein (HSP) Abs. In this work we have studied the fine specificity of the protective anti-HSP Abs by analysis of their interaction with a panel of overlapping peptides covering the whole HSP molecule. We found that arthritis-susceptible rats lack Abs to a small number of defined epitopes of the mycobacterial HSP65. These Abs are found naturally in resistant strains and are acquired by Lewis rats after recovery from the disease. Active vaccination of Lewis rats with the protective epitopes as well as passive vaccination with these Abs induced suppression of arthritis. Incubation of murine and human mononuclear cells with the protective Abs induced secretion of IL-10. Analysis of the primary and tertiary structure of the whole Mycobacterium tuberculosis HSP65 molecule indicated that the protective epitopes are B cell epitopes with nonconserved amino acid sequences found on the outer surface of the molecule. We conclude that HSP, the Ag that contains the pathogenic T cell epitopes in AA, also contains protective B cell epitopes exposed on its surface, and that natural and acquired resistance to AA is associated with the ability to respond to these epitopes.


Assuntos
Anticorpos Antibacterianos/biossíntese , Antígenos de Superfície/imunologia , Artrite Experimental/imunologia , Proteínas de Bactérias , Epitopos de Linfócito B/imunologia , Proteínas de Choque Térmico/imunologia , Interleucina-10/metabolismo , Sequência de Aminoácidos , Animais , Anticorpos Antibacterianos/metabolismo , Antígenos de Superfície/administração & dosagem , Antígenos de Superfície/metabolismo , Artrite Experimental/prevenção & controle , Doenças Autoimunes/imunologia , Doenças Autoimunes/prevenção & controle , Vacina BCG/administração & dosagem , Vacina BCG/imunologia , Sítios de Ligação de Anticorpos , Chaperonina 60/imunologia , Chaperonina 60/metabolismo , Chaperoninas/administração & dosagem , Chaperoninas/química , Chaperoninas/imunologia , Chaperoninas/metabolismo , Citocinas/metabolismo , Epitopos de Linfócito B/administração & dosagem , Epitopos de Linfócito B/metabolismo , Feminino , Proteínas de Choque Térmico/administração & dosagem , Proteínas de Choque Térmico/metabolismo , Humanos , Imunidade Inata , Imunoglobulinas/metabolismo , Injeções Intraperitoneais , Interleucina-10/biossíntese , Dados de Sequência Molecular , Mycobacterium tuberculosis/imunologia , Fragmentos de Peptídeos/administração & dosagem , Fragmentos de Peptídeos/imunologia , Fragmentos de Peptídeos/metabolismo , Estrutura Secundária de Proteína , Ratos , Ratos Endogâmicos BN , Ratos Endogâmicos Lew , Índice de Gravidade de Doença
19.
Eur J Immunol ; 34(10): 2919-29, 2004 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-15368308

RESUMO

NY-ESO-1 is a germ cell antigen aberrantly expressed by different tumor types that elicits strong humoral and cellular immune responses, representing one of the most promising candidates for vaccination of cancer patients. A detailed analysis of CD8(+) T cells generated in vaccine trials using NY-ESO-1-derived peptides (157-165 and 157-167) revealed that the dominant immune response was directed against a cryptic epitope (159-167) diverting the immune response from tumor recognition. Only CTL reactivity to the NY-ESO-1(157-165) peptide appeared to be capable of lysing NY-ESO-1/HLA-A0201-expressing tumor cells. To study the process of NY-ESO-1 peptide presentation by tumor cells in more detail we generated a high-affinity (K(D)=60 nM) antibody fragment that specifically recognizes the NY-ESO-1(157-165) peptide/HLA-A0201 complex. Peptide variants such as the NY-ESO-1(157-167) peptide or the cryptic NY-ESO-1(159-167) peptide were not recognized. The antibody fragment blocked in a dose-dependent fashion the recognition of NY-ESO-1/HLA-A2-positive tumor cells by NY-ESO-1(157-165) peptide-specific CD8(+) T cells. This antibody fragment is a novel reagent that binds with TCR-like specificity to the NY-ESO-1(157-165)/HLA-A2 complex thus distinguishing between CTL responses against immunological meaningful or cryptic NY-ESO-1-derived peptides. It may therefore become a useful monitoring tool for the development of NY-ESO-1-based cancer vaccines.


Assuntos
Especificidade de Anticorpos/imunologia , Antígenos de Neoplasias/imunologia , Fragmentos Fab das Imunoglobulinas/imunologia , Complexo Principal de Histocompatibilidade/imunologia , Proteínas de Membrana/imunologia , Peptídeos/imunologia , Linfócitos T Citotóxicos/imunologia , Sequência de Aminoácidos , Apresentação de Antígeno/imunologia , Vacinas Anticâncer/imunologia , Linhagem Celular Tumoral , Ensaio de Imunoadsorção Enzimática , Citometria de Fluxo , Humanos , Epitopos Imunodominantes/imunologia , Conformação Proteica , Transfecção
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