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1.
Evolution ; 69(2): 294-304, 2015 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-25495152

RESUMO

Differences in breeding system are associated with correlated ecological and morphological changes in plants. In Ficus, dioecy and monoecy are strongly associated with different suites of traits (tree height, population density, fruiting frequency, pollinator dispersal ecology). Although approximately 30% of fig species are pollinated by multiple species of fig-pollinating wasps, it has been suggested that copollinators are rare in dioecious figs. Here, we test whether there is a connection between the fig breeding system and copollinator incidence and diversification by conducting a meta-analysis of molecular data from pollinators of 119 fig species that includes new data from 15 Asian fig species. We find that the incidence of copollinators is not significantly different between monoecious and dioecious Ficus. Surprisingly, while all copollinators in dioecious figs are sister taxa, only 32.1% in monoecious figs are sister taxa. We present hypotheses to explain those patterns and discuss their consequences on the evolution of this mutualism.


Assuntos
Evolução Biológica , Ficus/fisiologia , Vespas/classificação , Vespas/genética , Animais , Sequência de Bases , Teorema de Bayes , Genes de RNAr , Mitocôndrias/genética , Dados de Sequência Molecular , Filogenia , Polinização , Alinhamento de Sequência , Simbiose
2.
Mol Ecol Resour ; 12(5): 894-908, 2012 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-22783911

RESUMO

We have evaluated High Resolution Melting (HRM) analysis as a method for one-step haplotype identification in phylogeographic analysis. Using two adjoined internal amplicons (c. 360 and 390 bp) at the chloroplast rps16 intron (c. 750 bp) we applied HRM to identify haplotypes in 21 populations of two European arctic-alpine herb species Arenaria ciliata and Arenaria norvegica (Caryophyllaceae). From 446 accessions studied, 20 composite rps16 haplotypes were identified by the melting-curve protocol, 18 of which could be identified uniquely. In a comparative sensitivity analysis with in silico PCR-RFLP, only seven of these 20 haplotypes could be identified uniquely. Observed in vitro experimental HRM profiles were corroborated by in silico HRM analysis generated on uMelt(SM) . In silico mutation analysis carried out on a 360 bp wild-type rps16I amplicon determined that the expected rate of missed single-nucleotide polymorphisms (SNP) detection in vitro was similar to existing evaluations of HRM sensitivity, with transversion SNPs being more likely to go undetected compared to transition SNPs. In vitro HRM successfully discriminated between all amplicon templates differing by two or more base changes (352 cases) and between 11 pairs of amplicons where the only difference was a single transition or transversion SNP. Only one pairwise comparison yielded no discernable HRM curve difference between haplotypes, and these samples differed by one transversion (C/G) SNP. HRM analysis represents an untapped resource in phylogeographic analysis, and with appropriate primer design any polymorphic locus is potentially amenable to this single-reaction method for haplotype identification.


Assuntos
Caryophyllaceae/classificação , Caryophyllaceae/genética , DNA de Cloroplastos/genética , Haplótipos , Biologia Molecular/métodos , Desnaturação de Ácido Nucleico , Filogeografia/métodos , DNA de Cloroplastos/química , DNA de Plantas/química , DNA de Plantas/genética , Dados de Sequência Molecular , Polimorfismo de Nucleotídeo Único , Sensibilidade e Especificidade , Análise de Sequência de DNA , Temperatura de Transição
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