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1.
J Biol Inorg Chem ; 21(3): 319-28, 2016 06.
Artigo em Inglês | MEDLINE | ID: mdl-26880094

RESUMO

Self-splicing group II introns are highly structured RNA molecules, containing a characteristic secondary and catalytically active tertiary structure, which is formed only in the presence of Mg(II). Mg(II) initiates the first folding step governed by the κζ element within domain 1 (D1κζ). We recently solved the NMR structure of D1κζ derived from the mitochondrial group II intron ribozyme Sc.ai5γ and demonstrated that Mg(II) is essential for its stabilization. Here, we performed a detailed multinuclear NMR study of metal ion interactions with D1κζ, using Cd(II) and cobalt(III)hexammine to probe inner- and outer-sphere coordination of Mg(II) and thus to better characterize its binding sites. Accordingly, we mapped (1)H, (15)N, (13)C, and (31)P spectral changes upon addition of different amounts of the metal ions. Our NMR data reveal a Cd(II)-assisted macrochelate formation at the 5'-end triphosphate, a preferential Cd(II) binding to guanines in a helical context, an electrostatic interaction in the ζ tetraloop receptor and various metal ion interactions in the GAAA tetraloop and κ element. These results together with our recently published data on Mg(II) interaction provide a much better understanding of Mg(II) binding to D1κζ, and reveal how intricate and complex metal ion interactions can be.


Assuntos
Cádmio/química , Cobalto/química , Magnésio/química , RNA/química , Sítios de Ligação , Espectroscopia de Ressonância Magnética
2.
J Biol Inorg Chem ; 21(8): 975-986, 2016 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-27704222

RESUMO

RNA G-quadruplexes, as their well-studied DNA analogs, require the presence of cations to fold and remain stable. This is the first comprehensive study on the interaction of RNA quadruplexes with metal ions. We investigated the formation and stability of two highly conserved and biologically relevant RNA quadruplex-forming sequences (24nt-TERRA and 18nt-NRAS) in the presence of several monovalent and divalent metal ions, namely Li+, Na+, K+, Rb+, Cs+, NH4+, Mg2+, Ca2+, Sr2+, and Ba2+. Circular dichroism was used to probe the influence of these metal ions on the folded fraction of the parallel G-quadruplexes, and UV thermal melting experiments allowed to assess the relative stability of the structures in each cationic condition. Our results show that the RNA quadruplexes are more stable than their DNA counterparts under the same buffer conditions. We have observed that the addition of mainly Na+, K+, Rb+, NH4+, as well as Sr2+ and Ba2+ in water, shifts the equilibrium to the folded quadruplex form, whereby the NRAS sequence responds stronger than TERRA. However, only K+ and Sr2+ lead to a significant increase in the stability of the folded structures, which is consistent with their coordination to the O6 atoms from the G-quartet guanosines. Compared to the respective DNA motives, dNRAS and htelo, the RNA sequences are not stabilized by Na+ ions. Finally, the difference in response between NRAS and TERRA, as well as to the corresponding DNA sequences with respect to different metal ions, could potentially be exploited for selective targeting purposes.


Assuntos
DNA/química , Quadruplex G , Metais/química , RNA/química , Sequência de Bases , Cátions Bivalentes/química , Cátions Bivalentes/metabolismo , Cátions Monovalentes/química , Cátions Monovalentes/metabolismo , Dicroísmo Circular , DNA/genética , DNA/metabolismo , Concentração de Íons de Hidrogênio , Metais/metabolismo , Desnaturação de Ácido Nucleico , Oligonucleotídeos/química , Oligonucleotídeos/genética , Oligonucleotídeos/metabolismo , RNA/genética , RNA/metabolismo , Espectrofotometria , Temperatura , Termodinâmica , Água/química
3.
Nucleic Acids Res ; 41(4): 2489-504, 2013 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-23275550

RESUMO

Folding of group II introns is characterized by a first slow compaction of domain 1 (D1) followed by the rapid docking of other domains to this scaffold. D1 compaction initiates in a small subregion encompassing the κ and ζ elements. These two tertiary elements are also the major interaction sites with domain 5 to form the catalytic core. Here, we provide the first characterization of the structure adopted at an early folding step and show that the folding control element can be narrowed down to the three-way junction with the κ motif. In our nuclear magnetic resonance studies of this substructure derived from the yeast mitochondrial group II intron Sc.ai5γ, we show that a high affinity Mg(II) ion stabilizes the κ element and enables coaxial stacking between helices d' and d'', favoring a rigid duplex across the three-way junction. The κ-element folds into a stable GAAA-tetraloop motif and engages in A-minor interactions with helix d'. The addition of cobalt(III)hexammine reveals three distinct binding sites. The Mg(II)-promoted structural rearrangement and rigidification of the D1 core can be identified as the first micro-step of D1 folding.


Assuntos
Íntrons , Magnésio/química , Sequência de Bases , Sítios de Ligação , Cobalto/química , Modelos Moleculares , Dados de Sequência Molecular , Ressonância Magnética Nuclear Biomolecular , Conformação de Ácido Nucleico , Prótons , Dobramento de RNA
4.
Angew Chem Int Ed Engl ; 54(33): 9687-90, 2015 Aug 10.
Artigo em Inglês | MEDLINE | ID: mdl-26119804

RESUMO

NMR spectroscopy has revealed pH-dependent structural changes in the highly conserved catalytic domain 5 of a bacterial group II intron. Two adenines with pK(a) values close to neutral pH were identified in the catalytic triad and the bulge. Protonation of the adenine opposite to the catalytic triad is stabilized within a G(syn)-AH(+) (anti) base pair. The pH-dependent anti-to-syn flipping of this G in the catalytic triad modulates the known interaction with the linker region between domains 2 and 3 (J23) and simultaneously the binding of the catalytic Mg(2+) ion to its backbone. Hence, this here identified shifted pK(a) value controls the conformational change between the two steps of splicing.


Assuntos
Azotobacter vinelandii/química , Azotobacter vinelandii/enzimologia , Íntrons , Prótons , RNA Catalítico/química , Adenina/química , Sequência de Bases , Domínio Catalítico , Concentração de Íons de Hidrogênio , Modelos Moleculares , Ressonância Magnética Nuclear Biomolecular , Conformação de Ácido Nucleico , Splicing de RNA
5.
Inorg Chem ; 51(23): 12776-88, 2012 Dec 03.
Artigo em Inglês | MEDLINE | ID: mdl-23151014

RESUMO

A new amphoteric copolymer, PhenISA, has been obtained by copolymerization of 4-(4'-aminobutyl)-1,10-phenanthroline (BAP) with 2-methylpiperazine and bis(acrylamido)acetic acid (BAC) (6% of phenanthroline-containing repeating units). The copolymer showed excellent solubility in water, where it self-aggregated to give clear nanoparticle suspensions (hydrodynamic diameter = 21 ± 2 nm, by dynamic light scattering (DLS) analysis). The phenanthroline pendants of the polymer stably coordinated either Re(CO)(3)(+) or Ru(phen)(2)(2+) fragments, affording luminescent Re-PhenISA, Re-Py-PhenISA, and Ru-PhenISA polymer complexes, emitting from triplet metal-to-ligand charge transfer ((3)MLCT) excited states (with λ(em) = 608, 571, and 614 nm, respectively, and photoluminescence quantum yields Φ(em) = 0.7%, 4.8%, and 4.1%, in aerated water solution, respectively). DLS analyses indicated that the polymer complexes maintained the nanosize of PhenISA. All the complexes were stable under physiological conditions (pH 7.4, 0.15 M NaCl) in the presence of an excess of the ubiquitous competitor cysteine. In vitro viability assays showed no toxicity of Re-Py-PhenISA and Ru-PhenISA complexes, at concentrations in the range of 0.5-50 µM (calculated on the metal-containing unit), toward HEK-293 (human embryonic kidney) cells. A preliminary investigation of internalization in HEK-293 cells, by means of fluorescence confocal microscopy, showed that Ru-PhenISA enters cells via an endocytic pathway and, subsequently, homogeneously diffuse within the cytoplasm across the vesicle membranes.


Assuntos
Substâncias Luminescentes/farmacologia , Compostos Organometálicos/farmacologia , Sobrevivência Celular/efeitos dos fármacos , Relação Dose-Resposta a Droga , Células HEK293 , Humanos , Substâncias Luminescentes/síntese química , Substâncias Luminescentes/química , Microscopia Confocal , Estrutura Molecular , Compostos Organometálicos/síntese química , Compostos Organometálicos/química , Fenantrolinas/química , Poliaminas/química , Rênio/química , Rutênio/química , Relação Estrutura-Atividade
6.
Chimia (Aarau) ; 66(10): 791-7, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-23146267

RESUMO

Multinuclear and multidimensional nuclear magnetic resonance (NMR) spectroscopy is applied in our groups to gain insights into the role of metal ions for the function and structure of large biomolecules. Specifically, NMR is used i) to investigate how metal ions bind to nucleic acids and thereby control the folding and structure of RNAs, ii) to characterize how metal ions are able to stabilize modified nucleic acids to be used as potential nanowires, and iii) to characterize the formation, structure, and role of the diverse metal clusters within plant metallothioneins. In this review we summarize the various NMR experiments applied and the information obtained, demonstrating the important and fascinating part NMR spectroscopy plays in the field of bioinorganic chemistry.


Assuntos
Espectroscopia de Ressonância Magnética/métodos , Metalotioneína/química , Ácidos Nucleicos/química , RNA Catalítico/química , Química Bioinorgânica/métodos , Modelos Moleculares
7.
J Am Chem Soc ; 132(41): 14397-9, 2010 Oct 20.
Artigo em Inglês | MEDLINE | ID: mdl-20866093

RESUMO

The dinuclear complex [Re(2)(µ-Cl)(2)(CO)(6)(µ-4,5-(Me(3)Si)(2)pyridazine)] gives in the solid state two polymorphs (yellow, 1Y, and orange, 1O), which can be either concomitantly or separately obtained on varying the crystallization rate. Both crystal phases exhibit intense photoluminescence from the lowest lying triplet metal-to-ligand charge transfer state, much stronger than in solution (quantum yields 0.56 and 0.52, for 1O and 1Y respectively, vs 0.06 in toluene), likely due to the restricted rotation of the Me(3)Si groups in the solid state. A clean, irreversible 1O → 1Y single-crystal-to-single-crystal phase transition occurs at 443 K, as revealed by variable temperature X-ray diffraction analysis. In spite of the absence of any strong intermolecular interactions in both forms, 1O and 1Y show very different absorption and emission maxima (λ(abs) 370 and 393 nm, λ(em) 534 and 570 nm, for 1Y and 1O, respectively). This behavior highlights the importance of the local organization of molecular dipoles in perturbing the photophysical properties of the molecule in the crystal.

8.
Biol Chem ; 391(1): 21-32, 2010 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-19919177

RESUMO

Binding of fluorine-containing drugs to bovine beta-lactoglobulin, the most abundant whey protein in bovine milk, was investigated by means of (19)F NMR and mass spectrometry. The stoichiometry of the binding and its stability in acidic medium, where beta-lactoglobulin is folded and stable, were also studied, along with competition from molecules that can be regarded as analogs of physiological ligands to bovine beta-lactoglobulin. Conditional binding data were combined with protein structural information derived from circular dichroism and limited proteolysis studies. Spectroscopic techniques were also used to assess whether the bound drugs stabilize the protein structure against denaturation by chaotropes or temperature at various pH values. The results obtained provide evidence for the presence of multiple binding regions on the protein, with a specific and different affinity for structurally different classes of hydrophobic drugs and, more generally, that bovine beta-lactoglobulin can bind and protect against low pH values various classes of drugs of pharmaceutical relevance.


Assuntos
Proteínas de Transporte/metabolismo , Ácidos Graxos Monoinsaturados/metabolismo , Indóis/metabolismo , Lactoglobulinas/metabolismo , Animais , Sítios de Ligação , Bovinos , Flúor , Flurbiprofeno/metabolismo , Fluvastatina , Concentração de Íons de Hidrogênio , Modelos Moleculares , Ressonância Magnética Nuclear Biomolecular , Ligação Proteica
9.
Biomacromolecules ; 10(12): 3273-82, 2009 Dec 14.
Artigo em Inglês | MEDLINE | ID: mdl-19911848

RESUMO

An amphoteric thiol-functionalized poly(amidoamine) nicknamed ISA23SH(10%) was synthesized. Rhenium complexes 1 and 2, containing 0.5 and 0.8 equiv of rhenium, respectively, were easily obtained by reacting ISA23SH(10%) with [Re(CO)(3)(H(2)O)(3)](CF(3)SO(3)) in aqueous solution at pH 5.5. Both ISA23SH(10%), and its rhenium complexes were soluble in water under physiological conditions. The resultant solutions were stable, even in the presence of cysteine. Rhenium chelation occurred through the S and N atoms of the cysteamine moiety, as demonstrated by (1)H, (13)C, and (15)N NMR spectroscopy. The diffusion coefficients and the hydrodynamic radii of ISA23SH(10%) and complex 1 were determined by pulsed gradient spin echo (PGSE) NMR experiments. The radius of the rhenium complexes 1 and 2 was always slightly larger than that of the parent polymer. TEM analysis showed that both complexes form spherical nanoparticles with narrow size distributions. Consistent results were obtained by dynamic light scattering. The observed sizes were in good agreement with those evaluated by PGSE. Preliminary in vitro and in vivo biological studies have been performed on complexes 1 and 2 as well as on the parent ISA23SH(10%). Neither hemolytic activity of the two rhenium complexes and the parent polymer, up to a concentration of 5 mg/mL, nor cytotoxic effects were observed on Hela cell after 48 h at a concentration of 100 ng/mL. In vivo toxicological tests showed that ISA23SH(10%) is highly biocompatible, with a maximum tolerated dose (MTD) of 500 mg/kg. No toxic side effects were apparent after the intravenous injection in mice of the two rhenium complexes in doses up to 20 mg/kg.


Assuntos
Quelantes/química , Nylons/química , Piperazinas/química , Poliaminas/química , Rênio/química , Animais , Células HeLa , Humanos , Camundongos , Camundongos Endogâmicos , Nylons/farmacologia , Piperazinas/farmacologia , Poliaminas/farmacologia , Rênio/farmacologia
10.
J Mol Graph Model ; 26(6): 1004-13, 2008 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-17905618

RESUMO

Extending a previous investigation, the ability of binding to the model calycin beta-lactoglobulin (BLG) was evaluated both in silico and in vitro for several fluorine-containing (semi-)synthetic molecules of pharmacological and pharmaceutical interest (antibiotics, vastatins, steroid drugs). Simulation procedures included molecular docking according to a Montecarlo-simulated annealing protocol and molecular dynamics; heteronuclear NMR and denaturant gradient gel electrophoresis were the selected experimental techniques. For the tested drugs, ranking of the binding affinity was consistently assessed by computation and by experiment. The affinity for BLG increased in the sequence: 5-fluorosalycilic acid

Assuntos
Antibacterianos/química , Biologia Computacional , Lactoglobulinas/química , Animais , Antibacterianos/síntese química , Antibacterianos/classificação , Antibacterianos/metabolismo , Sítios de Ligação , Bovinos , Simulação por Computador , Concentração de Íons de Hidrogênio , Interações Hidrofóbicas e Hidrofílicas , Cinética , Ligantes , Espectroscopia de Ressonância Magnética , Estrutura Molecular , Método de Monte Carlo , Ligação Proteica , Conformação Proteica , Estrutura Secundária de Proteína , Termodinâmica
11.
Inorg Chem ; 47(23): 11154-65, 2008 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-18986135

RESUMO

The three complexes [Re2(mu-X1)(mu-X2)(CO)6(mu-ppd-kappaN3:kappaN4)] (X1, X2 ) H, 1; X1 ) H, X2 ) Cl, 2; X1, X2 ) Cl, 3; ppd) 2,5-diphenyl-1,3,4-oxadiazole) have been synthesized by different routes, involving the reaction of [Re4(mu3-H)4(CO)12]with ppd for 1, the reaction of 1 with HCl for 2, and the reaction of [ReCl(CO)5] with ppd for 3. The three complexes possess a different number of valence electrons, so the formal Re-Re bond order varies from 2 to 1 to 0 in complexes 1, 2, and 3, respectively. This is reflected in the Re-Re bond distance (277.9, 297.9, and 358.5 pm in the same series)and in the stability of the complexes in the coordinating solvent acetonitrile (t1/2 for ppd displacement 13.6, 4.5, and 3.7 h,for 1, 2, and 3, respectively). Both experimental and calculated structures indicates that coordination induces a distortion from planarity of the diphenyloxadiazole moiety due to the interaction of the equatorial carbonyls with the bridging ppd,which increases on going from 1 to 2 to 3 (dihedral angle between the oxadiazole and the phenyl rings 18.4 degrees, 23.3 degrees, and 45.0 degrees, respectively). The UV spectra show pi-pi* transitions of the oxadiazole ligand (which shift to higher energy on increasing the distortion from the planarity, from 252 to 267 nm) and metal-to-ligand charge transfer absorptions (from 300 to 362 nm). Upon irradiation between 340 and 380 nm, complex 2 only features a weak broad emission at 527 nm(phi)0.02%), whereas upon excitation at 300 nm, the emission typical of free ppd is observed, suggesting photodissociation.Cyclic voltammetry investigations in acetonitrile showed that the three complexes exhibit ligand-centered irreversible reduction peaks (from -1.83 to -1.93 V vs Fc+|Fc), shifted to more positive values with respect to free ppd (-2.50 V). The shift however is smaller than in the analogous derivatives containing 1,2-diazines, suggesting a smaller electron depletion of the heterocycle ligand upon coordination. The complexes also show a metal-centered, bi-electronic, irreversible oxidation peak (from 1.05 to 1.37 V vs Fc+/Fc). A combined density functional and time-dependent density functional (TD DFT)study allowed us to understand the factors affecting the stability of the three complexes and to rationalize their electrochemical and photophysical properties in terms of their electronic structure.

12.
J Inorg Biochem ; 163: 278-291, 2016 10.
Artigo em Inglês | MEDLINE | ID: mdl-27289348

RESUMO

Targeting nucleic acids with metal complexes is an exciting and widely explored field of research. Following the discovery of the anticancer drug cisplatin, a number of metal complexes have been designed, synthesised, and tested for their DNA binding properties. On the contrary, the interaction of metal complexes with RNA has been much less investigated. RNA is an essential biomolecule, involved in a variety of crucial cellular functions, which offers a much wider structural diversity than DNA. As such, RNA represents an attractive target for the design and the development of structure-selective therapeutic and diagnostic agents. A few recent publications describe the ability of various metal complexes to interact with RNA, and the binding of cisplatin and derivatives to RNA is being currently investigated. This short review offers an overview of some recent advances on both covalent and non-covalent interactions of metal complexes with RNA and addresses the potential of targeting RNA non-duplex structures.


Assuntos
Cisplatino/química , Complexos de Coordenação/química , Conformação de Ácido Nucleico , RNA/química , Animais , Humanos
13.
Methods Mol Biol ; 848: 253-73, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22315074

RESUMO

Metal ions are indispensable for ribonucleic acids (RNAs) folding and activity. First they act as charge neutralization agents, allowing the RNA molecule to attain the complex active three dimensional structure. Second, metal ions are eventually directly involved in function. Nuclear magnetic resonance (NMR) spectroscopy offers several ways to study the RNA-metal ion interactions at an atomic level. Here, we first focus on special requirements for NMR sample preparation for this kind of experiments: the practical aspects of in vitro transcription and purification of small (<50 nt) RNA fragments are described, as well as the precautions that must be taken into account when a sample for metal ion titration experiments is prepared. Subsequently, we discuss the NMR techniques to accurately locate and characterize metal ion binding sites in a large RNA. For example, (2) J-[(1)H,(15)N]-HSQC (heteronuclear single quantum coherence) experiments are described to qualitatively distinguish between different modes of interaction. Finally, part of the last section is devoted to data analysis; this is how to calculate intrinsic affinity constants.


Assuntos
Metais/metabolismo , Ressonância Magnética Nuclear Biomolecular/métodos , RNA/metabolismo , Eletroforese em Gel de Poliacrilamida , Modelos Moleculares , Conformação de Ácido Nucleico , RNA/química , RNA/genética , RNA/isolamento & purificação , Transcrição Gênica
14.
Met Ions Life Sci ; 9: 197-234, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-22010273

RESUMO

Since the discovery of catalytic RNA molecules (ribozymes), intense research has been devoted to understand their structure and activity. Among RNA molecules, the large ribozymes, namely group I and group II introns and RNase P, are of special importance. The first two ribozymes are known for their ability to perform self-splicing while RNase P is responsible for the 5'-end maturation of tRNA in bacteria, archea, and eukaryotes. All three groups of ribozymes show a significant requirement for metal ions in order to establish the active tertiary structure that enables catalysis. The primary role of both monovalent and divalent metal ions is to screen the negative charge associated with the phosphate sugar backbone, but the metal ions also play an active role in catalysis. Biochemical and biophysical investigations, supported by recent findings from X-ray crystal structures, allow clarifying and rationalizing both the structural and catalytic roles of metal ions in large ribozymes. In particular, the "two-metal-ion mechanism", describing how metal ions in the active center take part in catalysis, has been largely corroborated.


Assuntos
Íons/química , Metais/química , Conformação de Ácido Nucleico , RNA Catalítico/química , Sítios de Ligação , Catálise , Íntrons , Modelos Moleculares , Estrutura Molecular , RNA Catalítico/genética , Ribonuclease P/química
15.
Dalton Trans ; 40(45): 12106-16, 2011 Dec 07.
Artigo em Inglês | MEDLINE | ID: mdl-22030935

RESUMO

We describe a new class of water soluble metallosurfactant molecules based on luminescent neutral iridium(III) complexes. The compounds possess an alkyl chain terminated with a negatively charged group, a sulphate. Due to their amphiphilic nature they assemble in aggregates in water and their photophysical properties, as well as the morphological characterization of the assemblies are presented. In particular, UV-Vis absorption, steady-state and time-resolved emission spectroscopy, dynamic light scattering and scanning electron microscopy techniques have been employed towards the analysis of the assemblies in different media. Comparison with the single components shows that the aggregates have very different photophysical properties. Importantly, the change in colour upon self-assembly is a remarkable feature which could be used for the design of probes which can change properties in different environments.

16.
Chem Commun (Camb) ; 46(34): 6255-7, 2010 Sep 14.
Artigo em Inglês | MEDLINE | ID: mdl-20668778

RESUMO

New luminescent dinuclear rhenium(I) tricarbonyl complex-PNA conjugates have been synthesized through a reliable solid-phase synthetic methodology. Their photophysical properties have been measured. The most luminescent Re-PNA conjugate 7 showed interesting two-photon absorption (TPA) properties, that were exploited for imaging experiments, to demonstrate its easy uptake into living cells.


Assuntos
DNA/química , Luminescência , Ácidos Nucleicos Peptídicos/análise , Ácidos Nucleicos Peptídicos/química , Rênio/análise , Rênio/química , Linhagem Celular , DNA/análise , DNA/metabolismo , Humanos , Estrutura Molecular , Compostos Organometálicos/análise , Compostos Organometálicos/síntese química , Compostos Organometálicos/química , Estereoisomerismo
17.
Inorg Chem ; 47(10): 4243-55, 2008 May 19.
Artigo em Inglês | MEDLINE | ID: mdl-18422309

RESUMO

A novel class of luminescent tricarbonyl rhenium(I) complexes of general formula [Re2(mu-X)2(CO)6(mu-diaz)] (X=halogen and diaz=1,2-diazine) was prepared by reacting [ReX(CO)5] with 0.5 equiv of diazine (seven different ligands were used). The bridging coordination of the diazine in these dinuclear complexes was confirmed by single-crystal X-ray analysis. Cyclic voltammetry in acetonitrile showed for all the complexes (but the phthalazine derivative) a chemically and electrochemically reversible ligand-centered reduction, as well as a reversible metal-centered bielectronic oxidation. With respect to the prototypical luminescent [ReCl(CO)3(bpy)] complex, the oxidation is more difficult and the reduction easier (about +0.3 V), so that a similar highest occupied molecular orbital-lowest unoccupied molecular orbital gap is observed. All of the complexes exhibit photoluminescence at room temperature in solution, with broad unstructured emission from metal-to-ligand charge-transfer states, at lambda in the range 579-620 nm. Lifetimes (tau=20-2200 ns) and quantum yields (Phi up to 0.12) dramatically change upon varying the bridging ligand X and the diazine substituents: in particular, quantum yields decrease in the series Cl, Br, and I and in the presence of substituents at the alpha positions of the pyridazine ring. A combined density functional and time-dependent density functional study of the geometry, relative stability, electronic structure, and photophysical properties of all the pyridazine derivatives was performed. The nature of the excited states involved in the electronic absorption spectra was ascertained, and trends in the energy of the highest occupied and lowest unoccupied molecular orbitals upon changing the pyridazine substituents and the bridging halogen ligands were discussed. The observed emission properties of these complexes were shown to be related to a combination of steric and electronic factors affecting their ground-state geometry and their stability.

18.
Chemistry ; 12(4): 1016-25, 2006 Jan 23.
Artigo em Inglês | MEDLINE | ID: mdl-16267862

RESUMO

The interaction of fluorinated alcohols with the anionic hydrido complex [HRe2(CO)9]- (1) has been investigated by NMR spectroscopy. According to the acidic strength of the alcohols, the interaction may result not only in the formation of dihydrogen-bonded ROH...[HRe2(CO)9]- adducts 2, but also in proton transfer to give the neutral species [H2Re2(CO)9] (3). With the weaker acid trifluoroethanol (TFE) evidence for the occurrence of the dihydrogen-bonding equilibrium was obtained by 2D 1H NOESY. The dependence of the hydride chemical shift on TFE concentration at different temperatures provided values for the constants of this equilibrium, from which the thermodynamic parameters were evaluated as deltaH(degrees) = -2.6(2) kcal mol(-1), deltaS(degrees) = -9.3(2) cal mol(-1) K(-1). This corresponds to a rather low basicity factor (E(j) = 0.64). Variable-temperature T1 measurements allowed the proton-hydride distance in adduct 2 a to be estimated (1.80 angstroms). In the presence of hexafluoroisopropyl alcohol (HFIP) simultaneous occurrence of both dihydrogen-bonding and proton-transfer equilibria was observed, and the equilibria shifted versus the protonated product 3 with increasing HFIP concentration and decreasing temperature. Reversible proton transfer between the alcohol and the hydrido complex occurs on the NMR timescale, as revealed by a 2D 1H EXSY experiment at 240 K. For the more acidic perfluoro-tert-butyl alcohol (PFTB) the protonation equilibrium was further shifted to the right. Thermal instability of 3 prevented the acquisition of accurate thermodynamic data for these equilibria. The occurrence of the proton-transfer processes (in spite of the unfavorable pK(a) values) can be explained by the formation of homoconjugated RO...HOR- pairs which stabilize the alcoholate anions.


Assuntos
Butanóis/química , Propanóis/química , Trifluoretanol/química , Ânions , Ligação de Hidrogênio , Espectroscopia de Ressonância Magnética , Prótons
19.
Inorg Chem ; 45(26): 10909-21, 2006 Dec 25.
Artigo em Inglês | MEDLINE | ID: mdl-17173450

RESUMO

The reaction of the electronically unsaturated (56 valence electrons, ve) tetrahedral cluster [Re4(mu3-H)4(CO)12] (1) with pyridazine (pydz) gives as the main initial product the tetranuclear cluster [Re4(mu-H)4(mu-pydz)(pydz)2(CO)12] (2a), with 64 ve and four hydrogen-bridged metal-metal interactions, with a spiked-triangle geometry. One of the three pydz ligands bridges, in a cis configuration, the cluster edge opposite to the vertex bearing the spike, as indicated by the X-ray single-crystal analysis. This species slowly decomposes, affording the dinuclear unsaturated (32 ve) complex [Re2(mu-H)2(mu-pydz)(CO)6] (3a) and two isomers of the tetranuclear cluster [Re4(mu-H)4(mu-pydz)2(CO)12] (64 ve), sharing an unusual square cluster geometry and differing in the trans (major, 85%, 4a) or cis (4a') configuration of the bridging pydz ligands. The structures of 3a and 4a have been ascertained by X-ray analysis, while the characterization of 4a' was hampered by its instability (slowly transforming into 3a in THF solution). Both the dimer and the square cluster 4a are also formed directly (and quickly) from 1, being present in solution since the beginning of the reaction. Cluster 4a is the main final reaction product. The reaction with phthalazine follows a similar course, with some differences in the relative amount of the final products 3b and 4b. Most of the novel complexes are able to emit light in solution at room temperature, and photophysical measurements were performed in CH2Cl2 solution on the main stable reaction products (i.e., the dinuclear species 3a and 3b and the trans square clusters 4a and 4b). The emission was in the range of 580-645 nm, from MLCT excited states, with lifetimes on the order of a hundred nanoseconds (50-473 ns). The quantum yields were 1 order of magnitude higher for the squares (1.7 and 1.3% for 4a and 4b, respectively, in CH2Cl2) than for the dinuclear complexes ( approximately 0.1%). In the case of 4a, a blue shift and an increase of the emission intensity were observed upon decreasing the solvent polarity.

20.
Inorg Chem ; 45(4): 1683-92, 2006 Feb 20.
Artigo em Inglês | MEDLINE | ID: mdl-16471981

RESUMO

Reaction between 7-azaindole and B(C6F5)3 quantitatively yields 7-(C6F5)3B-7-azaindole (4), in which B(C6F5)3 coordinates to the pyridine nitrogen of 7-azaindole, leaving the pyrrole ring unreacted even in the presence of a second equivalent of B(C6F5)3. Reaction of 7-azaindole with H2O-B(C6F5)3 initially produces [7-azaindolium]+[HOB(C6F5)3]- (5) which slowly converts to 4 releasing a H2O molecule. Pyridine removes the borane from the known complexes (C6F5)3B-pyrrole (1) and (C6F5)3B-indole (2), with formation of free pyrrole or indole, giving the more stable adduct (C6F5)3B-pyridine (3). The competition between pyridine and 7-azaindole for the coordination with B(C6F5)3 again yields 3. The molecular structures of compounds 4 and 5 have been determined both in the solid state and in solution and compared to the structures of other (C6F5)3B-N-heterocycle complexes. Two dynamic processes have been found in compound 4. Their activation parameters (DeltaH = 66 (3) kJ/mol, DeltaS = -18 (10) J/mol K and DeltaH = 76 (5) kJ/mol, DeltaS = -5 (18) J/mol K) are comparable with those of other (C6F5)3B-based adducts. The nature of the intramolecular interactions that result in such energetic barriers is discussed.

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