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1.
J Chem Phys ; 137(18): 184201, 2012 Nov 14.
Artigo em Inglês | MEDLINE | ID: mdl-23163363

RESUMO

Multidimensional visible spectroscopy using pulse shaping to produce pulses with stable controllable phases and delays has emerged as an elegant tool to acquire electronic spectra faster and with greatly reduced instrumental and data processing errors. Recent migration of this approach using acousto-optic modulator (AOM) pulse shaping to the mid-infrared region has proved useful for acquiring two dimensional infrared (2D IR) vibrational echo spectra. The measurement of spectral diffusion in 2D IR experiments hinges on obtaining accurate 2D line shapes. To date, pulse shaping 2D IR has not been used to study the time-dependent spectral diffusion of a vibrational chromophore. Here we compare the spectral diffusion data obtained from a standard non-collinear 2D IR spectrometer using delay lines to the data obtained from an AOM pulse shaper based 2D IR spectrometer. The pulse shaping experiments are performed in stationary, partially rotating, and fully rotating reference frames and are the first in the infrared to produce 2D spectra collected in a fully rotating frame using a phase controlled pulse sequence. Rotating frame experiments provide a dramatic reduction in the number of time points that must be measured to obtain a 2D IR spectrum, with the fully rotating frame giving the greatest reduction. Experiments were conducted on the transition metal carbonyl complex tricarbonylchloro(1,10-phenanthroline)rhenium(I) in chloroform. The time dependent data obtained from the different techniques and with different reference frames are shown to be in agreement.

2.
Proc Natl Acad Sci U S A ; 106(36): 15243-8, 2009 Sep 08.
Artigo em Inglês | MEDLINE | ID: mdl-19706895

RESUMO

The orientational dynamics of water at a neutral surfactant reverse micelle interface are measured with ultrafast infrared spectroscopy of the hydroxyl stretch, and the results are compared to orientational relaxation of water interacting with an ionic interface. The comparison provides insights into the influence of a neutral vs. ionic interface on hydrogen bond dynamics. Measurements are made and analyzed for large nonionic surfactant Igepal CO-520reverse micelles (water nanopool with a 9-nm diameter). The results are compared with those from a previous study of reverse micelles of the same size formed with the ionic surfactant Aerosol-OT (AOT). The results demonstrate that the orientational relaxation times for interfacial water molecules in the two types of reverse micelles are very similar (13 ps for Igepal and 18 ps for AOT) and are significantly slower than that of bulk water (2.6 ps). The comparison of water orientational relaxation at neutral and ionic interfaces shows that the presence of an interface plays the dominant role in determining the hydrogen bond dynamics, whereas the chemical nature of the interface plays a secondary role.


Assuntos
Ligação de Hidrogênio , Micelas , Tensoativos/química , Água/química , Hidróxidos/química , Espectrofotometria Infravermelho
3.
Proc Natl Acad Sci U S A ; 106(2): 375-80, 2009 Jan 13.
Artigo em Inglês | MEDLINE | ID: mdl-19106293

RESUMO

The exchange of water hydroxyl hydrogen bonds between anions and water oxygens is observed directly with ultrafast 2D IR vibrational echo chemical exchange spectroscopy (CES). The OD hydroxyl stretch of dilute HOD in H(2)O in concentrated (5.5 M) aqueous solutions of sodium tetrafluoroborate (NaBF(4)) displays a spectrum with a broad water-like band (hydroxyl bound to water oxygen) and a resolved, blue shifted band (hydroxyl bound to BF(4)(-)). At short time (200 fs), the 2D IR vibrational echo spectrum has 4 peaks, 2 on the diagonal and 2 off-diagonal. The 2 diagonal peaks are the 0-1 transitions of the water-like band and the hydroxyl-anion band. Vibrational echo emissions at the 1-2 transition frequencies give rise to 2 off-diagonal peaks. On a picosecond time scale, additional off-diagonal peaks grow in. These new peaks arise from chemical exchange between water hydroxyls bound to anions and hydroxyls bound to water oxygens. The growth of the chemical exchange peaks yields the time dependence of anion-water hydroxyl hydrogen bond switching under thermal equilibrium conditions as T(aw) = 7 +/- 1 ps. Pump-probe measurements of the orientational relaxation rates and vibrational lifetimes are used in the CES data analysis. The pump-probe measurements are shown to have the correct functional form for a system undergoing exchange.


Assuntos
Medição da Troca de Deutério/métodos , Ligação de Hidrogênio , Íons/química , Espectrofotometria Infravermelho/métodos , Água/química , Medição da Troca de Deutério/instrumentação , Cinética , Soluções , Espectrofotometria Infravermelho/instrumentação
4.
J Am Chem Soc ; 133(17): 6681-91, 2011 May 04.
Artigo em Inglês | MEDLINE | ID: mdl-21469666

RESUMO

Dynamic and structural properties of carbonmonoxy (CO)-coordinated cytochrome c(552) from Hydrogenobacter thermophilus (Ht-M61A) at different temperatures under thermal equilibrium conditions were studied with infrared absorption spectroscopy and ultrafast two-dimensional infrared (2D IR) vibrational echo experiments using the heme-bound CO as the vibrational probe. Depending on the temperature, the stretching mode of CO shows two distinct bands corresponding to the native and unfolded proteins. As the temperature is increased from low temperature, a new absorption band for the unfolded protein grows in and the native band decreases in amplitude. Both the temperature-dependent circular dichroism and the IR absorption area ratio R(A)(T), defined as the ratio of the area under the unfolded band to the sum of the areas of the native and unfolded bands, suggest a two-state transition from the native to the unfolded protein. However, it is found that the absorption spectrum of the unfolded protein increases its inhomogeneous line width and the center frequency shifts as the temperature is increased. The changes in line width and center frequency demonstrate that the unfolding does not follow simple two-state behavior. The temperature-dependent 2D IR vibrational echo experiments show that the fast dynamics of the native protein are virtually temperature independent. In contrast, the fast dynamics of the unfolded protein are slower than those of the native protein, and the unfolded protein fast dynamics and at least a portion of the slower dynamics of the unfolded protein change significantly, becoming faster as the temperature is raised. The temperature dependence of the absorption spectrum and the changes in dynamics measured with the 2D IR experiments confirm that the unfolded ensemble of conformers continuously changes its nature as unfolding proceeds, in contrast to the native state, which displays a temperature-independent distribution of structures.


Assuntos
Bactérias/enzimologia , Grupo dos Citocromos c/química , Desdobramento de Proteína , Modelos Moleculares , Conformação Proteica , Espectrofotometria Infravermelho/métodos , Temperatura
5.
J Chem Phys ; 135(7): 074502, 2011 Aug 21.
Artigo em Inglês | MEDLINE | ID: mdl-21861571

RESUMO

The center line slope (CLS) method is often used to extract the frequency-frequency correlation function (FFCF) from 2D IR spectra to delineate dynamics and to identify homogeneous and inhomogeneous contributions to the absorption line shape of a system. While the CLS method is extremely efficient, quite accurate, and immune to many experimental artifacts, it has only been developed and properly applied to systems that have a single vibrational band, or to systems of two species that have spectrally resolved absorption bands. In many cases, the constituent spectra of multiple component systems overlap and cannot be distinguished from each other. This situation creates ambiguity when analyzing 2D IR spectra because dynamics for different species cannot be separated. Here a mathematical formulation is presented that extends the CLS method for a system consisting of two components (chemically distinct uncoupled oscillators). In a single component system, the CLS corresponds to the time-dependent portion of the normalized FFCF. This is not the case for a two component system, as a much more complicated expression arises. The CLS method yields a series of peak locations originating from slices taken through the 2D spectra. The slope through these peak locations yields the CLS value for the 2D spectra at a given T(w). We derive analytically that for two component systems, the peak location of the system can be decomposed into a weighted combination of the peak locations of the constituent spectra. The weighting depends upon the fractional contribution of each species at each wavelength and also on the vibrational lifetimes of both components. It is found that an unknown FFCF for one species can be determined as long as the peak locations (referred to as center line data) of one of the components are known, as well as the vibrational lifetimes, absorption spectra, and other spectral information for both components. This situation can arise when a second species is introduced into a well characterized single species system. An example is a system in which water exists in bulk form and also as water interacting with an interface. An algorithm is presented for back-calculating the unknown FFCF of the second component. The accuracy of the algorithm is tested with a variety of model cases in which all components are initially known. The algorithm successfully reproduces the FFCF for the second component within a reasonable degree of error.

6.
J Chem Phys ; 134(5): 054512, 2011 Feb 07.
Artigo em Inglês | MEDLINE | ID: mdl-21303143

RESUMO

Water dynamics as reflected by the spectral diffusion of the water hydroxyl stretch were measured in w(0) = 2 (1.7 nm diameter) Aerosol-OT (AOT)/water reverse micelles in carbon tetrachloride and in isooctane solvents using ultrafast 2D IR vibrational echo spectroscopy. Orientational relaxation and population relaxation are observed for w(0) = 2, 4, and 7.5 in both solvents using IR pump-probe measurements. It is found that the pump-probe observables are sensitive to w(0), but not to the solvent. However, initial analysis of the vibrational echo data from the water nanopool in the reverse micelles in the isooctane solvent seems to yield different dynamics than the CCl(4) system in spite of the fact that the spectra, vibrational lifetimes, and orientational relaxation are the same in the two systems. It is found that there are beat patterns in the interferograms with isooctane as the solvent. The beats are observed from a signal generated by the AOT/isooctane system even when there is no water in the system. A beat subtraction data processing procedure does a reasonable job of removing the distortions in the isooctane data, showing that the reverse micelle dynamics are the same within experimental error regardless of whether isooctane or carbon tetrachloride is used as the organic phase. Two time scales are observed in the vibrational echo data, ~1 and ~10 ps. The slower component contains a significant amount of the total inhomogeneous broadening. Physical arguments indicate that there is a much slower component of spectral diffusion that is too slow to observe within the experimental window, which is limited by the OD stretch vibrational lifetime.


Assuntos
Tetracloreto de Carbono/química , Ácido Dioctil Sulfossuccínico/química , Octanos/química , Água/química , Micelas , Solventes/química , Espectrofotometria Infravermelho/métodos , Tensoativos/química
7.
J Am Chem Soc ; 132(51): 18367-76, 2010 Dec 29.
Artigo em Inglês | MEDLINE | ID: mdl-21142083

RESUMO

Myoglobin (Mb) double mutant T67R/S92D displays peroxidase enzymatic activity in contrast to the wild type protein. The CO adduct of T67R/S92D shows two CO absorption bands corresponding to the A(1) and A(3) substates. The equilibrium protein dynamics for the two distinct substates of the Mb double mutant are investigated by using two-dimensional infrared (2D IR) vibrational echo spectroscopy and molecular dynamics (MD) simulations. The time-dependent changes in the 2D IR vibrational echo line shapes for both of the substates are analyzed using the center line slope (CLS) method to obtain the frequency-frequency correlation function (FFCF). The results for the double mutant are compared to those from the wild type Mb. The experimentally determined FFCF is compared to the FFCF obtained from molecular dynamics simulations, thereby testing the capacity of a force field to determine the amplitudes and time scales of protein structural fluctuations on fast time scales. The results provide insights into the nature of the energy landscape around the free energy minimum of the folded protein structure.


Assuntos
Proteínas Mutantes/química , Mioglobina/química , Peroxidase/química , Monóxido de Carbono/química , Catálise , Raios Infravermelhos , Simulação de Dinâmica Molecular , Proteínas Mutantes/genética , Mioglobina/genética , Peroxidase/genética , Conformação Proteica , Espectroscopia de Infravermelho com Transformada de Fourier , Vibração , Espectroscopia por Absorção de Raios X
8.
J Chem Phys ; 132(24): 244703, 2010 Jun 28.
Artigo em Inglês | MEDLINE | ID: mdl-20590210

RESUMO

The orientational correlation functions measured in the time-resolved second-harmonic generation (TRSHG) and time-resolved sum-frequency generation (TRSFG) experiments are derived. In the laboratory coordinate system, the Y(l) (m)(Omega(lab)(t))Y(2) (m)(Omega(lab)(0)) (l=1,3 and m=0,2) correlation functions, where the Y(l) (m) are spherical harmonics, describe the orientational relaxation observables of molecules at interfaces. A wobbling-in-a-cone model is used to evaluate the correlation functions. The theory demonstrates that the orientational relaxation diffusion constant is not directly obtained from an experimental decay time in contrast to the situation for a bulk liquid. Model calculations of the correlation functions are presented to demonstrate how the diffusion constant and cone half-angle affect the time-dependence of the signals in TRSHG and TRSFG experiments. Calculations for the TRSHG experiments on Coumarin C314 molecules at air-water and air-water-surfactant interfaces are presented and used to examine the implications of published experimental results for these systems.


Assuntos
Movimento (Física) , Análise Espectral , Difusão , Rotação , Fatores de Tempo
9.
J Am Chem Soc ; 131(23): 8318-28, 2009 Jun 17.
Artigo em Inglês | MEDLINE | ID: mdl-19449867

RESUMO

To determine the relative importance of the confining geometry and nanoscopic length scale versus water/interface interactions, the dynamic interactions between water and interfaces are studied with ultrafast infrared spectroscopy. Aerosol OT (AOT) is a surfactant that can form two-dimensional lamellar structures with known water layer thickness as well as well-defined monodispersed spherical reverse micelles of known water nanopool diameter. Lamellar structures and reverse micelles are compared based on two criteria: surface-to-surface dimensions to study the effect of confining length scales, and water-to-surfactant ratio to study water/interface interactions. We show that the water-to-surfactant ratio is the dominant factor governing the nature of water interacting with an interface, not the characteristic nanoscopic distance. The detailed structure of the interface and the specific interactions between water and the interface also play a critical role in the fraction of water molecules influenced by the surface. A two-component model in which water is separated into bulk-like water in the center of the lamellar structure or reverse micelle and interfacial water is used to quantitatively extract the interfacial dynamics. A greater number of perturbed water molecules are present in the lamellar structures as compared to the reverse micelles due to the larger surface area per AOT molecule and the greater penetration of water molecules past the sulfonate head groups in the lamellar structures.


Assuntos
Ácido Dioctil Sulfossuccínico/química , Micelas , Nanoestruturas/química , Tensoativos/química , Água/química , Estrutura Molecular , Nanoestruturas/ultraestrutura
10.
J Phys Chem B ; 113(30): 10210-21, 2009 Jul 30.
Artigo em Inglês | MEDLINE | ID: mdl-19572659

RESUMO

Proton transfer in protonated Nafion fuel cell membranes is studied using several pyrene derivative photoacids. Proton transfer in the center of the Nafion nanoscopic water channels is probed with the highly charged photoacid 8-hydroxypyrene-1,3,6-trisulfonate (HPTS). At high hydration levels, both the time-integrated fluorescence spectrum and the fluorescence kinetics of HPTS permit the determination of hydronium concentration of the interior of the water pools in Nafion. The proton transfer kinetics of HPTS in protonated Nafion at maximum hydration are identical to the kinetics displayed by HPTS in a 0.5 M HCl solution. The hydronium concentration near the water interface in Nafion is estimated with rhodamine-6G to be 1.4 M. Excited state proton transfer (ESPT) is followed in the nonpolar side chain regions of Nafion with the photoacid 8-hydroxy-N,N,N',N',N'',N''-hexamethylpyrene-1,3,6-trisulfonamide (HPTA). Excited state proton transfer of HPTA is possible in protonated Nafion only at the highest hydration level due to a relatively high local pH.

11.
J Phys Chem B ; 113(40): 13300-7, 2009 Oct 08.
Artigo em Inglês | MEDLINE | ID: mdl-19746960

RESUMO

Ultrafast polarization and wavelength selective IR pump-probe spectroscopy is used to measure the inertial and long time orientational dynamics of pi-hydrogen bonding complexes. Inertial orientational relaxation is sensitive to the angular potential associated with the hydrogen bond. The complexes studied are composed of phenol-OD (hydroxyl hydrogen replaced by deuterium) and various pi-base solvents with different electron donating or withdrawing substituents (chlorobenzene, bromobenzene, benzene, toluene, p-xylene, mesitylene, 1-pentyne). The different substituents provide experimental control of the hydrogen bond strength. The inertial orientational relaxation of the complexes, measured at the center frequency of each line, is independent of the hydrogen bond strength, demonstrating the insensitivity of the OD inertial dynamics, and therefore the H-bond angular potential, to the hydrogen bond strength. OD stretch absorption bands are inhomogeneously broadened through interactions with the solvent. The hydrogen bonding complexes all have similar wavelength dependent inertial orientational relaxation across their inhomogeneously broadened OD stretch absorption lines. The wavelength dependence of the inertial reorientation across each line arises because of a correlation between local solvent structure and the angular potential. These two results imply that local solvent structure acts as the controlling influence in determining the extent of inertial orientational relaxation, and therefore the angular potential, and that variation in the pi-hydrogen bond strength is of secondary importance.


Assuntos
Ligação de Hidrogênio , Hidrogênio/química , Radical Hidroxila/química , Solventes/química , Anisotropia , Fenol/química , Análise Espectral/instrumentação , Análise Espectral/métodos
12.
J Phys Chem B ; 113(25): 8560-8, 2009 Jun 25.
Artigo em Inglês | MEDLINE | ID: mdl-19485407

RESUMO

The orientational dynamics of water molecules at the interface in large Aerosol-OT (AOT) reverse micelles are investigated using ultrafast infrared spectroscopy of the OD stretch of dilute HOD in H(2)O. In large reverse micelles ( approximately 9 nm diameter or larger), a significant amount of the nanoscopic water is sufficiently distant from the interface that it displays bulk-like characteristics. However, some water molecules interact with the interface and have vibrational absorption spectra and dynamics distinct from bulk water. The different characteristics of these interfacial waters allow their contribution to the data to be separated from the bulk. The infrared absorption spectrum of the OD stretch is analyzed to show that the interfacial water molecules have a spectrum that peaks near 2565 cm(-1) in contrast to 2509 cm(-1) in bulk water. A two-component model is developed that simultaneously describes the population relaxation and orientational dynamics of the OD stretch in the spectral region of the interfacial water. The model provides a consistent description of both observables and demonstrates that water interacting with the interface has slower vibrational relaxation and orientational dynamics. The orientational relaxation of interfacial water molecules occurs in 18 +/- 3 ps, in contrast to the bulk water value of 2.6 ps.


Assuntos
Micelas , Água/química , Aerossóis , Anisotropia , Óxido de Deutério/química , Modelos Moleculares , Vibração
13.
J Phys Chem B ; 112(33): 10221-7, 2008 Aug 21.
Artigo em Inglês | MEDLINE | ID: mdl-18665635

RESUMO

The formation and dissociation kinetics of a series of triethylsilanol/solvent weakly hydrogen bonding complexes with enthalpies of formation ranging from -1.4 to -3.3 kcal/mol are measured with ultrafast two-dimensional infrared (2D IR) chemical exchange spectroscopy in liquid solutions at room temperature. The correlation between the complex enthalpies of formation and dissociation rate constants can be expressed with an equation similar to the Arrhenius equation. The experimental results are in accord with previous observations on eight phenol/solvent complexes with enthalpies of formation from -0.6 to -2.5 kcal/mol. It was found that the inverse of the solute-solvent complex dissociation rate constant is linearly related to exp(-DeltaH0/RT) where DeltaH0 is the complex enthalpy of formation. It is shown here, that the triethylsilanol-solvent complexes obey the same relationship with the identical proportionality constant, that is, all 13 points, five silanol complexes and eight phenol complexes, fall on the same line. In addition, features of 2D IR chemical exchange spectra at long reaction times (spectral diffusion complete) are explicated using the triethylsilanol systems. It is shown that the off-diagonal chemical exchange peaks have shapes that are a combination (outer product) of the absorption line shapes of the species that give rise to the diagonal peaks.

14.
J Phys Chem B ; 112(17): 5279-90, 2008 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-18370431

RESUMO

Hydrogen bond dynamics of water in highly concentrated NaBr salt solutions and reverse micelles are studied using ultrafast 2D-IR vibrational echo spectroscopy and polarization-selective IR pump-probe experiments performed on the OD hydroxyl stretch of dilute HOD in H(2)O. The vibrational echo experiments measure spectral diffusion, and the pump-probe experiments measure orientational relaxation. Both experimental observables are directly related to the structural dynamics of water's hydrogen bond network. The measurements performed on NaBr solutions as a function of concentration show that the hydrogen bond dynamics slow as the NaBr concentration increases. The most pronounced change is in the longest time scale dynamics which are related to the global rearrangement of the hydrogen bond structure. Complete hydrogen bond network randomization slows by a factor of approximately 3 in approximately 6 M NaBr solution compared to that in bulk water. The hydrogen bond dynamics of water in nanoscopically confined environments are studied by encapsulating water molecules in ionic head group (AOT) and nonionic head group (Igepal CO 520) reverse micelles. Water dynamics in the nanopools of AOT reverse micelles are studied as a function of size by observing orientational relaxation. Orientational relaxation dynamics deviate significantly from bulk water when the size of the reverse micelles is smaller than several nm and become nonexponential and slower as the size of the reverse micelles decreases. In the smallest reverse micelles, orientational relaxation (hydrogen bond structural randomization) is almost 20 times slower than that in bulk water. To determine if the changes in dynamics from bulk water are caused by the influence of the ionic head groups of AOT or the nanoconfinement, the water dynamics in 4 nm nanopools in AOT reverse micelles (ionic) and Igepal reverse micelles (nonionic) are compared. It is found that the water orientational relaxation in the 4 nm diameter nanopools of the two types of reverse micelles is almost identical, which indicates that confinement by an interface to form a nanoscopic water pool is a primary factor governing the dynamics of nanoscopic water rather than the presence of charged groups at the interface.


Assuntos
Brometos/química , Íons/química , Compostos de Sódio/química , Água/química , Cicloexanos/química , Óxido de Deutério/química , Hexanos/química , Ligação de Hidrogênio , Micelas , Nanopartículas/química , Octanos/química , Tensoativos/química
15.
J Phys Chem B ; 112(32): 10054-63, 2008 Aug 14.
Artigo em Inglês | MEDLINE | ID: mdl-18646797

RESUMO

Unfolded vs native CO-coordinated horse heart cytochrome c (h-cyt c) and a heme axial methionine mutant cyt c552 from Hydrogenobacter thermophilus ( Ht-M61A) are studied by IR absorption spectroscopy and ultrafast 2D-IR vibrational echo spectroscopy of the CO stretching mode. The unfolding is induced by guanidinium hydrochloride (GuHCl). The CO IR absorption spectra for both h-cyt c and Ht-M61A shift to the red as the GuHCl concentration is increased through the concentration region over which unfolding occurs. The spectra for the unfolded state are substantially broader than the spectra for the native proteins. A plot of the CO peak position vs GuHCl concentration produces a sigmoidal curve that overlays the concentration-dependent circular dichroism (CD) data of the CO-coordinated forms of both Ht-M61A and h-cyt c within experimental error. The coincidence of the CO peak shift curve with the CD curves demonstrates that the CO vibrational frequency is sensitive to the structural changes induced by the denaturant. 2D-IR vibrational echo experiments are performed on native Ht-M61A and on the protein in low- and high-concentration GuHCl solutions. The 2D-IR vibrational echo is sensitive to the global protein structural dynamics on time scales from subpicosecond to greater than 100 ps through the change in the shape of the 2D spectrum with time (spectral diffusion). At the high GuHCl concentration (5.1 M), at which Ht-M61A is essentially fully denatured as judged by CD, a very large reduction in dynamics is observed compared to the native protein within the approximately 100 ps time window of the experiment. The results suggest the denatured protein may be in a glassy-like state involving hydrophobic collapse around the heme.


Assuntos
Citocromos c/química , Espectrofotometria Infravermelho/métodos , Dicroísmo Circular
16.
J Phys Chem A ; 112(41): 10244-9, 2008 Oct 16.
Artigo em Inglês | MEDLINE | ID: mdl-18798602

RESUMO

The charge redistribution upon photoexcitation is investigated for a series of pyrene photoacids to better understand the driving force behind excited-state proton-transfer processes. The changes in electric dipole for the lowest two electronic transitions ( (1)L b and (1)L a) are measured by Stark spectroscopy, and the magnitudes of charge transfer of the protonated and deprotonated states are compared. For neutral photoacids studied here, the results show that the amount of charge transfer depends more upon the electronic state that is excited than the protonation state. Transitions from the ground state to the (1)L b state result in a much smaller change in electric dipole than transitions to the (1)L a state. Conversely, for the cationic (ammonium) photoacid studied, photoexcitation of a particular electronic state results in much smaller charge transfer for the protonated state than for the deprotonated state.


Assuntos
Ácidos/química , Sulfonatos de Arila/química , Elétrons , Modelos Químicos , Estrutura Molecular , Fotoquímica , Prótons , Pirenos/química , Espectrofotometria/métodos , Análise Espectral/métodos , Estereoisomerismo
17.
J Chem Phys ; 128(20): 204505, 2008 May 28.
Artigo em Inglês | MEDLINE | ID: mdl-18513030

RESUMO

Ultrafast two-dimensional infrared (2D-IR) vibrational echo spectroscopy can probe the fast structural evolution of molecular systems under thermal equilibrium conditions. Structural dynamics are tracked by observing the time evolution of the 2D-IR spectrum, which is caused by frequency fluctuations of vibrational mode(s) excited during the experiment. However, there are a variety of effects that can produce line shape distortions and prevent the correct determination of the frequency-frequency correlation function (FFCF), which describes the frequency fluctuations and connects the experimental observables to a molecular level depiction of dynamics. In addition, it can be useful to analyze different parts of the 2D spectrum to determine if dynamics are different for subensembles of molecules that have different initial absorption frequencies in the inhomogeneously broadened absorption line. Here, an important extension to a theoretical method for extraction of the FFCF from 2D-IR spectra is described. The experimental observable is the center line slope (CLSomega(m)) of the 2D-IR spectrum. The CLSomega(m) is obtained by taking slices through the 2D spectrum parallel to the detection frequency axis (omega(m)). Each slice is a spectrum. The slope of the line connecting the frequencies of the maxima of the sliced spectra is the CLSomega(m). The change in slope of the CLSomega(m) as a function of time is directly related to the FFCF and can be used to obtain the complete FFCF. CLSomega(m) is immune to line shape distortions caused by destructive interference between bands arising from vibrational echo emission, from the 0-1 vibrational transition (positive), and from the 1-2 vibrational transition (negative) in the 2D-IR spectrum. The immunity to the destructive interference enables the CLSomega(m) method to compare different parts of the bands as well as comparing the 0-1 and 1-2 bands. Also, line shape distortions caused by solvent background absorption and finite pulse durations do not affect the determination of the FFCF with the CLSomega(m) method. The CLSomega(m) can also provide information on the cross correlation between frequency fluctuations of the 0-1 and 1-2 vibrational transitions.

18.
J Phys Chem B ; 110(40): 19998-20013, 2006 Oct 12.
Artigo em Inglês | MEDLINE | ID: mdl-17020388

RESUMO

Ultrafast two-dimensional (2D) infrared vibrational echo experiments and theory are used to examine chemical exchange between solute-solvent complexes and the free solute for the solute phenol and three solvent complex partners, p-xylene, benzene, and bromobenzene, in mixed solvents of the partner and CCl4. The experiments measure the time evolution of the 2D spectra of the hydroxyl (OD) stretching mode of the phenol. The time-dependent 2D spectra are analyzed using time-dependent diagrammatic perturbation theory with a model that includes the chemical exchange (formation and dissociation of the complexes), spectral diffusion of both the complex and the free phenol, orientational relaxation of the complexes and free phenol, and the vibrational lifetimes. The detailed calculations are able to reproduce the experimental results and demonstrate that a method employed previously that used a kinetic model for the volumes of the peaks is adequate to extract the exchange kinetics. The current analysis also yields the spectral diffusion (time evolution of the dynamic line widths) and shows that the spectral diffusion is significantly different for phenol complexes and free phenol.

19.
J Phys Chem B ; 109(14): 6514-9, 2005 Apr 14.
Artigo em Inglês | MEDLINE | ID: mdl-16851731

RESUMO

The orientational dynamics of a homeotropically aligned nematic liquid crystal, 4'-pentyl-4-biphenylcarbonitrile (5-CB), is studied over more than six decades of time (500 fs to 2 mus) using optical heterodyne detected optical Kerr effect experiments. In contrast to the dynamics of nematogens in the isotropic phase, the data do not decay as a highly temperature-dependent exponential on the longest time scale, but rather, a temperature-independent power law spanning more than two decades of time, the final power law, is observed. On short time scales (approximately 3 ps to approximately 1 ns) another power law, the intermediate power law, is observed that is temperature dependent. The power law exponent of the correlation function associated with the intermediate power law displays a linear dependence on the change in the nematic order parameter with temperature. Between the intermediate power law and the final power law, there is a crossover region that displays an inflection point. The temperature-dependent orientational dynamics in the nematic phase are shown to be very different than those observed in the isotropic phase.

20.
J Phys Chem B ; 109(45): 21273-84, 2005 Nov 17.
Artigo em Inglês | MEDLINE | ID: mdl-16853758

RESUMO

The dynamics of water in nanoscopic pools 1.7-4.0 nm in diameter in AOT reverse micelles were studied with ultrafast infrared spectrally resolved stimulated vibrational echo and pump-probe spectroscopies. The experiments were conducted on the OD hydroxyl stretch of low-concentration HOD in the H2O, providing a direct examination of the hydrogen-bond network dynamics. Pump-probe experiments show that the vibrational lifetime of the OD stretch mode increases as the size of the reverse micelle decreases. These experiments are also sensitive to hydrogen-bond dissociation and reformation dynamics, which are observed to change with reverse micelle size. Spectrally resolved vibrational echo data were obtained at several frequencies. The vibrational echo data are compared to data taken on bulk water and on a 6 M NaCl solution, which is used to examine the role of ionic strength on the water dynamics in reverse micelles. Two types of vibrational echo measurements are presented: the vibrational echo decays and the vibrational echo peak shifts. As the water nanopool size decreases, the vibrational echo decays become slower. Even the largest nanopool (4 nm, approximately 1000 water molecules) has dynamics that are substantially slower than bulk water. It is demonstrated that the slow dynamics in the reverse micelle water nanopools are a result of confinement rather than ionic strength. The data are fit using time-dependent diagrammatic perturbation theory to obtain the frequency-frequency correlation function (FFCF) for each reverse micelle. The results are compared to the FFCF of water and show that the largest differences are in the slowest time scale dynamics. In bulk water, the slowest time scale dynamics are caused by hydrogen-bond network equilibration, i.e., the making and breaking of hydrogen bonds. For the smallest nanopools, the longest time scale component of the water dynamics is approximately 10 times longer than the dynamics in bulk water. The vibrational echo data for the smallest reverse micelle displays a dependence on the detection wavelength, which may indicate that multiple ensembles of water molecules are being observed.


Assuntos
Micelas , Espectrofotometria Infravermelho/métodos , Água/química , Deutério , Ligação de Hidrogênio , Concentração Osmolar , Cloreto de Sódio/farmacologia , Espectrofotometria Infravermelho/instrumentação , Succinatos/química , Vibração
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