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1.
Nucleic Acids Res ; 32(1): 151-7, 2004.
Artigo em Inglês | MEDLINE | ID: mdl-14704352

RESUMO

Site-selective scission of ribonucleic acids (RNAs) has attracted considerable interest, since RNA is an intermediate in gene expression and the genetic material of many pathogenic viruses. Polyamine-imidazole conjugates for site-selective RNA scission, without free imidazole, were synthesized and tested on yeast phenylalanine transfer RNA. These molecules catalyze RNA hydrolysis non-randomly. Within the polyamine chain, the location of the imidazole residue, the numbers of nitrogen atoms and their relative distances have notable influence on cleavage selectivity. A norspermine derivative reduces the cleavage sites to a unique location, in the anticodon loop of the tRNA, in the absence of complementary sequence. Experimental results are consistent with a cooperative participation of an ammonium group of the polyamine moiety, in addition to it's binding to the negatively charged ribose-phosphate backbone, as proton source, and the imidazole moiety as a base. There is correlation between the location of the magnesium binding sites and the RNA cleavage sites, suggesting that the protonated nitrogens of the polycationic chain compete with some of the magnesium ions for RNA binding. Therefore, the cleavage pattern is specific of the RNA structure. These compounds cleave at physiological pH, representing novel reactive groups for antisense oligonucleotide derivatives or to enhance ribozyme activity.


Assuntos
Mimetismo Molecular , Poliaminas/química , Poliaminas/metabolismo , RNA/metabolismo , Ribonuclease Pancreático/metabolismo , Espermina/análogos & derivados , Anticódon/genética , Sequência de Bases , Sítios de Ligação , Escherichia coli/genética , Concentração de Íons de Hidrogênio , Hidrólise , Imidazóis/metabolismo , Magnésio/metabolismo , Modelos Moleculares , Dados de Sequência Molecular , Estrutura Molecular , Conformação de Ácido Nucleico , RNA/química , RNA/genética , RNA Bacteriano/química , RNA Bacteriano/genética , RNA Bacteriano/metabolismo , RNA de Transferência de Fenilalanina/química , RNA de Transferência de Fenilalanina/genética , RNA de Transferência de Fenilalanina/metabolismo , Ribonuclease Pancreático/química , Espermina/química , Espermina/metabolismo , Relação Estrutura-Atividade , Especificidade por Substrato , Leveduras/genética
2.
Chem Commun (Camb) ; (1): 88-9, 2003 Jan 07.
Artigo em Inglês | MEDLINE | ID: mdl-12610979

RESUMO

Enantioselective molecularly imprinted polymers (MIPs) have been synthesised via ROMP for the first time.

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