Investigating biogeographic boundaries of the Sunda shelf: A phylogenetic analysis of two island populations of Macaca fascicularis.

OBJECTIVES: Cyclical submergence and re-emergence of the Sunda Shelf throughout the Pleistocene served as a dynamic biogeographic landscape, across which long-tailed macaques (Macaca fascicularis) have migrated and evolved. Here, we tested the integrity of the previously reported continental-insular haplotype divide reported among Y and mitochondrial DNA lineages across multiple studies. MATERIALS AND METHODS: The continental-insular haplotype divide was tested by heavily sampling wild macaques from two important biogeographic regions within Sundaland: (1) Singapore, the southernmost tip of continental Asia and (2) Bali, Indonesia, the southeastern edge of the Indonesian archipelago, immediately west of Wallace's line. Y DNA was haplotyped for samples from Bali, deep within the Indonesian archipelago. Mitochondrial D-loop from both islands was analyzed against existing data using Maximum Likelihood and Bayesian approaches. RESULTS: We uncovered both "continental" and "insular" Y DNA haplotypes in Bali. Between Singapore and Bali we found 52 unique mitochondrial haplotypes, none of which had been previously described. Phylogenetic analyses confirmed a major haplogroup division within Singapore and identified five new Singapore subclades and two primary subclades in Bali. DISCUSSION: While we confirmed the continental-insular divide among mtDNA haplotypes, maintenance of both Y DNA haplotypes on Bali, deep within the Indonesian archipelago calls into question the mechanism by which Y DNA diversity has been maintained. It also suggests the continental-insular designation is less appropriate for Y DNA, leading us to propose geographically neutral Y haplotype designations.

Primates and primatologists: social contexts for interspecies pathogen transmission.

Humans and nonhuman primates (NHP) interact in a variety of contexts. The frequency, duration, and intensity of interspecies interaction influence the likelihood that contact results in cross-species transmission of infectious agents. In this study, we present results of a cross-sectional survey of attendees at a national conference of primatologists, characterizing their occupational exposures to NHP. Of 116 individuals who participated in the study, 68.1% reported having worked with NHP in a field setting, 68.1% in a laboratory setting, and 24.1% at a zoo or animal sanctuary. Most subjects (N=98, 84.5%) reported having worked with multiple NHP taxa, including 46 (39.7%) who had worked with more than five distinct taxa. Sixty-nine subjects (59.5%) recalled having been scratched by a NHP and 48 (41.1%) had been bitten; 32 subjects reporting being bitten more than once. Eleven subjects (9.5%) reported having been injured by a needle containing NHP tissue or body fluids. We conclude that primatologists are at high risk for exposure to NHP-borne infectious agents. Furthermore, primatologists' varied occupational activities often bring them into contact with multiple NHP species in diverse contexts and geographic areas, over extended periods of time, making them a unique population with respect to zoonotic and anthropozoonotic disease risk.

Questioning the Extreme Neurovirulence of Monkey B Virus (Macacine alphaherpesvirus 1).

Monkey B virus (Macacine alphaherpesvirus 1; BV) occurs naturally in macaques of the genus Macaca, which includes rhesus and long-tailed (cynomolgus) monkeys that are widely used in biomedical research. BV is closely related to the human herpes simplex viruses (HSV), and BV infections in its natural macaque host are quite similar to HSV infections in humans. Zoonotic BV is extremely rare, having been diagnosed in only a handful of North American facilities with the last documented case occurring in 1998. However, BV is notorious for its neurovirulence since zoonotic infections are serious, usually involving the central nervous system, and are frequently fatal. Little is known about factors underlying the extreme neurovirulence of BV in humans. Here we review what is actually known about the molecular biology of BV and viral factors affecting its neurovirulence. Based on what is known about related herpesviruses, areas for future research that may elucidate mechanisms underlying the neurovirulence of this intriguing virus are also reviewed.

Understanding Primate Herpesviruses.

Viruses related to the herpes simplex viruses of humans are present in all nonhuman primate (NHP) species tested and cross species transmission has been documented. The herpesvirus present in macaques, Herpes B virus (BV) rarely causes disease in its natural macaque host. However, when transmitted to a nonnative host, BV has occasionally caused severe and even fatal disease if not treated immediately. Here we present a comprehensive review of the taxonomy, molecular biology, physiology, epidemiology, diagnosis and treatment of BV. We also summarizes what is known about related herpesviruses of other NHP species and the zoonotic potential of these viruses.

Genome sequence variation among isolates of monkey B virus (Macacine alphaherpesvirus 1) from captive macaques.

Complete genome sequences of 19 strains of monkey B virus (Macacine alphaherpesvirus 1; BV) isolated from several macaque species were determined. A low level of sequence variation was present among BV isolates from rhesus macaques. Most variation among BV strains isolated from rhesus macaques was located in regions of repetitive or quasi-repetitive sequence. Variation in coding sequences (polypeptides and miRNAs) was minor compared to regions of non-coding sequences. Non-coding sequences in the long and short repeat regions of the genome did however exhibit islands of conserved sequence. Oral and genital isolates from a single monkey were identical in sequence and varied only in the number of iterations of repeat units in several areas of repeats. Sequence variation between BV isolates from different macaque species (different BV genotypes) was much greater and was spread across the entire genome, confirming the existence of different genotypes of BV in different macaque species.

Precision grips in young chimpanzees.

A precision grip, thumb-finger opposition, has been regarded as an uniquely human trait. Napier's conclusion that chimpanzees were incapable of precision grip was based on two subjects and prehension of a single object (i.e., a grape). The purpose of the present study was to specify grip type and hand use by 13 young chimpanzees to prehend three different-sized food objects. The subjects were laboratory raised (eight males and five females) and ranged in age from 27 to 58 months. An ethogram was devised that comprised 43 different grip types: ten configurations of precision grips were found, in addition to imprecise or inefficient grip types (nine types), thumb-to-finger opposition (10 types), power grips (two types), and a variety of other grips (12 types). Subjects most often prehended were very small-sized (5 mm × 5 mm × 3 mm) or small-sized (10 mm × 10 mm × 3 mm) food objects with precision and imprecise grips. An analysis of latency to prehend, i.e., efficiency, revealed (1) precision grips were equally efficient for all object sizes; (2) power grips were most efficient with the largest object (a grape); (3) with imprecise grips, the left hand was more efficient than the right with small objects, and with power grips the right hand was more efficient than the left for medium-sized objects. No population handedness was observed, but individual handedness was seen in nine subjects for some grip types and some object sizes. This study provides evidence that young chimpanzees preferentially use a true precision grip to prehend small and very small objects. © 1996 Wiley-Liss, Inc.

TB infection in the nonhuman primate biomedical model: tip of the iceberg?

Biomedical research in the 21st century increasingly relies on pathogen-free nonhuman primates (NHPs) to model human pathophysiology. Despite adherence to protocols designed to maintain pathogen-free colonies, reports of tuberculosis regularly appear. We hypothesize that, undetected by standard screening protocols, mycobacteria of the Mycobacterium tuberculosis complex (MTBC) continue to circulate in established NHP colonies and may, in addition, be periodically reintroduced with newly imported animals. The tuberculin skin test (TST), the accepted standard screening test for tuberculosis, relies on the host's immune response to detect infection, but empirical data suggest that TST lacks both specificity and, particularly in certain NHP species and in immune compromised animals, sensitivity. In order to improve the detection of MTBC infection in NHP colonies we propose new screening protocols that incorporate molecular methods to detect mycobacteria. These new tests do not rely on the host's immune response and may allow for strain typing of the pathogens - enhancing our ability to elucidate patterns of disease transmission. Moreover, the ability to rapidly and noninvasively collect specimens could lead to an improved appreciation of the burden of MTBC circulating in populations of NHPs and humans, including drug-resistant strains, data that are invaluable to public health efforts.

Disease risk analysis: a tool for primate conservation planning and decision making.

Concern about emerging and re-emerging diseases plays an increasing role in conservation and management of both captive and free-ranging nonhuman primates (NHPs). Managers and policy makers must formulate conservation plans in an arena plagued by uncertainty, complexity, emotion, and politics. The risk analysis paradigm provides a framework that brings together scientists and policy experts to make better decisions for both people and animals. Risk analysis is a multidisciplinary, science-based process that provides an organized and logical approach for incorporating scientific information into policy development in the real world. By blending four specific goal-oriented stages-hazard identification, risk assessment, risk management, and risk communication-one can logically assess the probability that an adverse event, such as the introduction of an emerging disease into a naïve population, will occur. The following is a review of this process as it pertains to NHP conservation and risks associated with infectious diseases.

Detection of antibodies to selected human pathogens among wild and pet macaques (Macaca tonkeana) in Sulawesi, Indonesia.

Human-to-primate disease transmission can potentially cause significant morbidity and mortality among wild primate populations and thus constitutes an important conservation issue. Our cross-sectional study examines serological evidence of exposure to human pathogens among wild and pet macaques in Sulawesi. Serum samples taken from 11 pet and 15 wild macaques (Macaca tonkeana) were analyzed for antibodies to a panel of viruses commonly encountered in human populations. Antibodies to measles, influenza A, and parainfluenza 1 were detected in sera of both pet and wild macaques. Antibodies to parainfluenza 2 and 3 were found in the sera of wild macaques only. Possible routes of exposure, as well as implications for conservation are discussed.

Field methodology for lateral cranial radiography of nonhuman primates.

The historical lack of field-based radiographic studies of nonhuman primates within the field of anthropology is likely due to the perceived difficulty of transporting and operating X-ray equipment. Here we present a method for taking lateral cranial radiographs of nonhuman primates in the field that is simple to employ, and that produces exposed films suitable for collection of measurement data useful for growth and development studies, as well as for investigating bone and soft-tissue pathology. Several different X-ray units, film types, and portable power sources were used, all producing suitable images of similar quality, indicating that this methodology is likely not overly sensitive to these important parameters.