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1.
Prep Biochem Biotechnol ; 51(1): 35-43, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-32687005

RESUMO

Rosmarinic acid (RA) is an active constituent of Ocimum basilicum. It has been shown that hairy root production (measured as dry weight) improves when green basil (O. basilicum "Cinnamon") is cultured under the light. In contrast, purple basil (O. basilicum "Purpurascens") shows greater hairy root production when cultured under dark conditions. The level of gene expression was highest in hairy roots of green basil under dark conditions for up to 1 week. Transcript levels were highest in hairy roots of purple basil under both dark and light conditions after 2 weeks of culturing. After 3 weeks of culture under light conditions, green basil had accumulated 1.9-fold higher RA content than that of purple basil, which in turn was fivefold higher than that of the natural roots (42.86 µg/mg). Tyrosine aminotransferase showed a higher transcript level when compared to the other phenylpropanoid pathway genes (phenylalanine ammonia-lyase, cinnamate 4-hydroxylase, and coenzyme-A ligase) in both dark and light conditions and in all-time regimens. RA accumulation was higher in the cultured hairy roots of green basil than those of purple basil under both light and dark conditions.


Assuntos
Antioxidantes/metabolismo , Cinamatos/metabolismo , Depsídeos/metabolismo , Expressão Gênica , Ocimum basilicum/genética , Ocimum basilicum/metabolismo , Folhas de Planta/metabolismo , Raízes de Plantas/genética , Raízes de Plantas/metabolismo , Expressão Gênica/efeitos da radiação , Luz , Ocimum basilicum/classificação , Folhas de Planta/efeitos da radiação , Proteínas de Plantas/genética , Transdução de Sinais/efeitos da radiação , Transcrição Gênica/efeitos da radiação , Tirosina Transaminase/genética , Ácido Rosmarínico
2.
Molecules ; 22(6)2017 May 30.
Artigo em Inglês | MEDLINE | ID: mdl-28555066

RESUMO

Members of the genus Ixeris have long been used in traditional medicines as stomachics, sedatives, and diuretics. Phenylalanine ammonia-lyase (PAL), cinnamate-4-hydroxylase (C4H), 4-coumarate: coenzyme-A (CoA) ligase (4CL), chalcone synthase (CHS), and dihydroflavonol 4-reductase (DFR) are important enzymes in the phenylpropanoid pathway. In this study, we analyzed seven genes from Ixeris dentata var. albiflora that are involved in phenylpropanoid biosynthesis, using an Illumina/Solexa HiSeq 2000 platform. The amino acid sequence alignments for IdPALs, IdC4H, Id4CLs, IdCHS, and IdDFR showed high identity to sequences from other plants. We also investigated transcript levels using quantitative real-time PCR, and analyzed the accumulation of phenylpropanoids in different organs of I. dentata var. albiflora using high-performance liquid chromatography. The transcript levels of IdC4H, Id4CL1, IdCHS, and IdDFR were highest in the leaf. The catechin, chlorogenic acid, ferulic acid, and quercetin contents were also highest in the leaf. We suggest that expression of IdC4H, Id4CL1, IdCHS, and IdDFR is associated with the accumulation of phenylpropanoids. Our results may provide baseline information for elucidating the mechanism of phenylpropanoid biosynthesis in different organs of I. dentata var. albiflora.


Assuntos
Asteraceae/metabolismo , Propanóis/metabolismo , Aciltransferases/metabolismo , Regulação da Expressão Gênica de Plantas , Fenilalanina Amônia-Liase/metabolismo , Proteínas de Plantas/metabolismo , Reação em Cadeia da Polimerase em Tempo Real
3.
Molecules ; 22(12)2017 Dec 07.
Artigo em Inglês | MEDLINE | ID: mdl-29215592

RESUMO

Angelica gigas Nakai (AGN) is a crucial oriental medicinal herb that grows especially in Korea and the Far-East countries. It contains chemically active compounds like pyranocoumarins, polyacetylenes and essential oils, which might be useful for treatment of several chronic diseases. It has been used for centuries as a traditional medicine in Southeast Asia, but in Western countries is used as a functional food and a major ingredient of several herbal products. The genus Angelica is also known as 'female ginseng' due to its critical therapeutic role in female afflictions, such as gynecological problems. However, it is well-documented that the AGN pyranocoumarins may play vital beneficial roles against cancer, neurodisorders, inflammation, osteoporosis, amnesia, allergies, depression, fungi, diabetes, ischemia, dermatitis, reactive oxygen species (ROS) and androgen. Though numerous studies revealed the role of AGN pyranocoumarins as therapeutic agents, none of the reviews have published their molecular mechanism of action. To the best of our knowledge, this would be the first review that aims to appraise the biosynthesis of AGN's major active pyranocoumarins, discuss effective extraction and formulation methods, and detail the molecular action mechanism of decursin (D), decursinol angelate (DA) and decursinol (DOH) in chronic diseases, which would further help extension of research in this area.


Assuntos
Angelica/química , Antineoplásicos Fitogênicos/farmacologia , Medicamentos de Ervas Chinesas/farmacologia , Neoplasias/tratamento farmacológico , Fitoterapia/métodos , Piranocumarinas/farmacologia , Angelica sinensis , Animais , Antineoplásicos Fitogênicos/biossíntese , Antineoplásicos Fitogênicos/isolamento & purificação , Antineoplásicos Fitogênicos/farmacocinética , Benzopiranos/isolamento & purificação , Benzopiranos/metabolismo , Benzopiranos/farmacocinética , Benzopiranos/farmacologia , Butiratos/isolamento & purificação , Butiratos/metabolismo , Butiratos/farmacocinética , Butiratos/farmacologia , Modelos Animais de Doenças , Medicamentos de Ervas Chinesas/química , Medicamentos de Ervas Chinesas/farmacocinética , Humanos , Extração Líquido-Líquido/métodos , Medicina Tradicional Coreana , Neoplasias/genética , Neoplasias/metabolismo , Neoplasias/patologia , Extratos Vegetais/química , Raízes de Plantas/química , Plantas Medicinais , Piranocumarinas/isolamento & purificação , Piranocumarinas/metabolismo , Piranocumarinas/farmacocinética , Roedores
4.
BMC Genomics ; 17: 303, 2016 Apr 23.
Artigo em Inglês | MEDLINE | ID: mdl-27107812

RESUMO

BACKGROUND: Valeriana fauriei is commonly used in the treatment of cardiovascular diseases in many countries. Several constituents with various pharmacological properties are present in the roots of Valeriana species. Although many researches on V. fauriei have been done since a long time, further studies in the discipline make a limit due to inadequate genomic information. Hence, Illumina HiSeq 2500 system was conducted to obtain the transcriptome data from shoot and root of V. fauriei. RESULTS: A total of 97,595 unigenes were noticed from 346,771,454 raw reads after preprocessing and assembly. Of these, 47,760 unigens were annotated with Uniprot BLAST hits and mapped to COG, GO and KEGG pathway. Also, 70,013 and 88,827 transcripts were expressed in root and shoot of V. fauriei, respectively. Among the secondary metabolite biosynthesis, terpenoid backbone and phenylpropanoid biosynthesis were large groups, where transcripts was involved. To characterize the molecular basis of terpenoid, carotenoid, and phenylpropanoid biosynthesis, the levels of transcription were determined by qRT-PCR. Also, secondary metabolites content were measured using GC/MS and HPLC analysis for that gene expression correlated with its accumulation respectively between shoot and root of V. fauriei. CONCLUSIONS: We have identified the transcriptome using Illumina HiSeq system in shoot and root of V. fauriei. Also, we have demonstrated gene expressions associated with secondary metabolism such as terpenoid, carotenoid, and phenylpropanoid.


Assuntos
Metaboloma , Transcriptoma , Valeriana/genética , Carotenoides/biossíntese , Cromatografia Líquida de Alta Pressão , Cromatografia Gasosa-Espectrometria de Massas , Sequenciamento de Nucleotídeos em Larga Escala , Raízes de Plantas/genética , Brotos de Planta/genética , RNA de Plantas/genética , Metabolismo Secundário/genética , Análise de Sequência de RNA , Terpenos/metabolismo
5.
Molecules ; 21(6)2016 May 27.
Artigo em Inglês | MEDLINE | ID: mdl-27240331

RESUMO

Valeriana fauriei (V. fauriei), which emits a characteristic and unpleasant odor, is important in traditional medicine. In this study, the expression of terpenoid biosynthetic genes was investigated in different organs that were also screened for volatile compounds including valerenic acid and its derivatives. Specific expression patterns from different parts of V. fauriei were observed using quantitative real-time PCR (qRT-PCR). The highest transcript levels of biosynthetic genes involved in mevalonic acid (MVA) and methylerythritol phosphate (MEP) production were found in the stem. Although the amounts of volatile compounds were varied by organ, most of the volatile terpenoids were accumulated in the root. Gas chromatography mass spectrometry (GC-MS) analysis identified 128 volatile compounds, which represented 65.33% to 95.66% of total volatiles. Certain compounds were only found in specific organs. For example, isovalerenic acid and valerenic acid and its derivatives were restricted to the root. Organs with high transcript levels did not necessarily have high levels of the corresponding chemical constituents. According to these results, we hypothesize that translocation may occur between different organs in V. fauriei.


Assuntos
Vias Biossintéticas/genética , Regulação da Expressão Gênica de Plantas , Terpenos/metabolismo , Valeriana/genética , Valeriana/metabolismo , Regulação Enzimológica da Expressão Gênica , Indenos/metabolismo , Metabolômica/métodos , Sesquiterpenos/metabolismo , Terpenos/química , Transcrição Gênica , Valeriana/química , Compostos Orgânicos Voláteis/metabolismo
6.
Biol Pharm Bull ; 37(7): 1221-7, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24739190

RESUMO

Prunella vulgaris L., commonly known as "self-heal" or "heal-all," is a perennial herb with a long history of medicinal use. Phenylalanine ammonia-lyase (PAL), cinnamate 4-hydroxylase (C4H), and 4-coumarate:coenzyme-A (CoA) ligase (4CL) are important enzymes in the phenylpropanoid pathway and in the accumulation of rosmarinic acid (RA), which is a major secondary metabolite in P. vulgaris. In this study, we isolated cDNAs encoding PvPAL, PvC4H, and Pv4CL from P. vulgaris using rapid amplification of cDNA ends polymerase chain reaction (PCR). The amino acid sequence alignments of PvPAL, PvC4H, and Pv4CL showed high sequence identity to those of other plants. Quantitative real-time PCR analysis was used to determine the transcript levels of genes involved in RA biosynthesis in the flowers, leaves, stems, and roots of P. vulgaris. The transcript levels of PvPAL, PvC4H, and Pv4CL1 were the highest in flowers, whereas Pv4CL2 was the highest in roots. High-performance liquid chromatography analysis also showed the highest RA content in the flowers (3.71 mg/g dry weight). We suggest that the expression of the PvPAL, PvC4H, and Pv4CL1 genes is correlated with the accumulation of RA. Our results revealed that P. vulgaris flowers are appropriate for medicinal usage, and our findings provide support for increasing RA production in this plant.


Assuntos
Cinamatos/metabolismo , Depsídeos/metabolismo , Regulação da Expressão Gênica de Plantas , Genes de Plantas , Prunella/genética , Prunella/metabolismo , Sequência de Aminoácidos , Vias Biossintéticas , Cromatografia Líquida de Alta Pressão , Cinamatos/isolamento & purificação , Clonagem Molecular , DNA Complementar/genética , Depsídeos/isolamento & purificação , Dados de Sequência Molecular , Componentes Aéreos da Planta/enzimologia , Componentes Aéreos da Planta/genética , Componentes Aéreos da Planta/metabolismo , Raízes de Plantas/enzimologia , Raízes de Plantas/genética , Raízes de Plantas/metabolismo , Prunella/enzimologia , RNA de Plantas/genética , Reação em Cadeia da Polimerase em Tempo Real , Alinhamento de Sequência , Ácido Rosmarínico
7.
ScientificWorldJournal ; 2014: 980740, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24672406

RESUMO

Flavonols are the most abundant of all the flavonoids and play pivotal roles in a variety of plants. We isolated a cDNA clone encoding flavonol synthase from Scutellaria baicalensis (SbFLS). The SbFLS cDNA is 1011 bp long, encodes 336 amino acid residues, and belongs to a family of 2-oxoglutarate-dependent dioxygenases. The overall structure of SbFLS is very similar to that of Arabidopsis thaliana anthocyanidin synthase (AtANS), with a ß jelly-roll fold surrounded by tens of short and long α-helices. SbFLS was constitutively expressed in the roots, stems, leaves, and flowers, with particularly high expression in the roots and flowers. SbFLS transcript levels in the roots were 376-, 70-, and 2.5-fold higher than in the leaves, stems, and flowers. The myricetin content was significantly higher than that of kaempferol and quercetin. Therefore, we suggest that SbFLS mediates flavonol formation in the different organs of S. baicalensis. Our study may contribute to the knowledge of the role of FLS in S. baicalensis.


Assuntos
Clonagem Molecular , Oxirredutases/genética , Proteínas de Plantas/genética , Scutellaria baicalensis/genética , DNA Complementar/química , DNA Complementar/genética , Flavonóis/metabolismo , Modelos Moleculares , Especificidade de Órgãos/genética , Oxirredutases/química , Oxirredutases/metabolismo , Filogenia , Proteínas de Plantas/química , Proteínas de Plantas/metabolismo , Conformação Proteica , Scutellaria baicalensis/classificação , Scutellaria baicalensis/metabolismo , Análise de Sequência de DNA , Transcrição Gênica
8.
ScientificWorldJournal ; 2014: 726567, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24605062

RESUMO

Anthocyanidin reductase (ANR) and leucoanthocyanidin reductase (LAR) play an important role in the monomeric units biosynthesis of proanthocyanidins (PAs) such as catechin and epicatechin in several plants. The aim of this study was to clone ANR and LAR genes involved in PAs biosynthesis and examine the expression of these two genes in different organs under different growth conditions in two tartary buckwheat cultivars, Hokkai T8 and T10. Gene expression was carried out by quantitative real-time RT-PCR, and catechin and epicatechin content was analyzed by high performance liquid chromatography. The expression pattern of ANR and LAR did not match the accumulation pattern of PAs in different organs of two cultivars. Epicatechin content was the highest in the flowers of both cultivars and it was affected by light in only Hokkai T8 sprouts. ANR and LAR levels in tartary buckwheat might be regulated by different mechanisms for catechin and epicatechin biosynthesis under light and dark conditions.


Assuntos
Antocianinas/metabolismo , Vias Biossintéticas/genética , Catequina/análise , Fagopyrum/enzimologia , NADH NADPH Oxirredutases/genética , Sequência de Bases , Catequina/biossíntese , Cromatografia Líquida de Alta Pressão , Clonagem Molecular , Biologia Computacional , DNA Complementar/genética , Fagopyrum/química , Dados de Sequência Molecular , Estrutura Molecular , Reação em Cadeia da Polimerase em Tempo Real , Análise de Sequência de DNA , Especificidade da Espécie
9.
Molecules ; 19(11): 17141-53, 2014 Oct 24.
Artigo em Inglês | MEDLINE | ID: mdl-25347458

RESUMO

Riboflavin (vitamin B2) is the precursor of flavin mononucleotide and flavin adenine dinucleotide-essential cofactors for a wide variety of enzymes involving in numerous metabolic processes. In this study, a partial-length cDNA encoding bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase (LcRIBA), 2 full-length cDNAs encoding lumazine synthase (LcLS1 and LcLS2), and a full-length cDNA encoding riboflavin synthase (LcRS) were isolated from Lycium chinense, an important traditional medicinal plant. Sequence analyses showed that these genes exhibited high identities with their orthologous genes as well as having the same common features related to plant riboflavin biosynthetic genes. LcRIBA, like other plant RIBAs, contained a DHBPS region in its N terminus and a GCHII region in its C-terminal part. LcLSs and LcRS carried an N-terminal extension found in plant riboflavin biosynthetic genes unlike the orthologous microbial genes. Quantitative real-time polymerase chain reaction analysis showed that 4 riboflavin biosynthetic genes were constitutively expressed in all organs examined of L. chinense plants with the highest expression levels found in the leaves or red fruits. LcRIBA, which catalyzes 2 initial reactions in riboflavin biosynthetic pathway, was the highest transcript in the leaves, and hence, the richest content of riboflavin was detected in this organ. Our study might provide the basis for investigating the contribution of riboflavin in diverse biological activities of L. chinense and may facilitate the metabolic engineering of vitamin B2 in crop plants.


Assuntos
DNA Complementar/genética , GTP Cicloidrolase/genética , Lycium/genética , Complexos Multienzimáticos/genética , Riboflavina Sintase/genética , Riboflavina/genética , Riboflavina/metabolismo , Sequência de Aminoácidos , Biodiversidade , GTP Cicloidrolase/metabolismo , Genes de Plantas/genética , Lycium/metabolismo , Complexos Multienzimáticos/metabolismo , Peptídeo Sintases/genética , Peptídeo Sintases/metabolismo , Plantas Medicinais/genética , Plantas Medicinais/metabolismo , Riboflavina Sintase/metabolismo , Alinhamento de Sequência , Fosfatos Açúcares/metabolismo
10.
Molecules ; 19(8): 11250-62, 2014 Jul 31.
Artigo em Inglês | MEDLINE | ID: mdl-25090116

RESUMO

Lycium chinense is a shrub that has health benefits and is used as a source of medicines in Asia. In this study, a full-length cDNA clone encoding ß-ring carotene hydroxylase (LcCHXB) and partial-length cDNA clones encoding phytoene synthase (LcPSY), phytoene desaturase (LcPDS), ξ-carotene desaturase (LcZDS), lycopene ß-cyclase (LcLCYB), lycopene ε-cyclase (LcLCYE), ε-ring carotene hydroxylase (LcCHXE), zeaxanthin epoxidase (LcZEP), carotenoid cleavage dioxygenase (LcCCD1), and 9-cis epoxycarotenoid dioxygenase (LcNCED) were identified in L. chinense. The transcripts were constitutively expressed at high levels in leaves, flowers and red fruits, where the carotenoids are mostly distributed. In contrast, most of the carotenoid biosynthetic genes were weakly expressed in the roots and stems, which contained only small amounts of carotenoids. The level of LcLCYE transcripts was very high in leaves and correlated with the abundance of lutein in this plant tissue. During maturation, the levels of lutein and zeaxanthin in L. chinense fruits dramatically increased, concomitant with a rise in the level of ß-cryptoxanthin. LcPSY, LcPDS, LcZDS, LcLCYB, and LcCHXE were highly expressed in red fruits, leading to their substantially higher total carotenoid content compared to that in green fruits. Total carotenoid content was high in both the leaves and red fruits of L. chinense. Our findings on the biosynthesis of carotenoids in L. chinense provide insights into the molecular mechanisms involved in carotenoid biosynthesis and may facilitate the optimization of carotenoid production in L. chinense.


Assuntos
Carotenoides/biossíntese , Genes de Plantas , Lycium/genética , Lycium/metabolismo , Vias Biossintéticas , Clonagem Molecular , Regulação da Expressão Gênica de Plantas , Especificidade de Órgãos/genética , Fenótipo , Alinhamento de Sequência , Transcrição Gênica
11.
Molecules ; 19(8): 10922-35, 2014 Jul 25.
Artigo em Inglês | MEDLINE | ID: mdl-25068786

RESUMO

Astragalus membranaceus is one of the most important traditional Korean and Chinese medicinal herbs because it contains triterpenoid saponins (astragaloside I, II, III, and IV), which have beneficial and pharmacological effects on health. In this study, we analyzed 10 mevalonate pathway genes that are involved in astragaloside biosynthesis using the Illumina/Solexa HiSeq2000 platform. We determined the expression levels of the 10 genes using quantitative real-time PCR, and analyzed the accumulation of astragalosides in different organs using high-performance liquid chromatography. Genes related to the mevalonate pathway were expressed in different levels in different organs. Almost all genes showed high transcript levels in the stem and leaf, with the lowest transcript levels being recorded in the root. In contrast, most astragalosides accumulated in the root. In particular, the astragaloside IV content was distributed in the following order: root (0.58 mg/g DW) > flower (0.27 mg/g DW) > stem (0.23 mg/g DW) > leaf (0.04 mg/g DW). In the root, astragaloside II exhibited the highest content (2.09 mg/g DW) compared to astragaloside I, III, and IV. Notably, gene expression did not follow the same pattern as astragaloside accumulation. We suggest carefully that astragalosides are synthesized in the leaves and stem and then translocated to the root. This study contributes towards improving our understanding of astragaloside biosynthesis in A. membranaceus.


Assuntos
Astrágalo/genética , Astrágalo/metabolismo , Astragalus propinquus/genética , Astragalus propinquus/metabolismo , Regulação da Expressão Gênica de Plantas , Saponinas/metabolismo , Astrágalo/química , Astragalus propinquus/química , Vias Biossintéticas , Genes de Plantas , Fases de Leitura Aberta , Especificidade de Órgãos/genética , Saponinas/química , Terpenos/química , Terpenos/metabolismo
12.
World J Microbiol Biotechnol ; 30(3): 887-92, 2014 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-24162949

RESUMO

Baicalin, baicalein, and wogonin were accumulated in hairy roots derived from Scutellaria lateriflora and Scutellaria baicalensis. The levels of baicalein and baicalin were 6.8 and 5.0 times higher, respectively, in S. baicalensis than in S. lateriflora. A total of 47 metabolites were detected and identified in Scutellaria species by GC-TOF MS. The metabolites from the two species were subjected to principal component analysis (PCA) to evaluate differences. PCA fully distinguished between the two species. The results showed that individual phenolic acids and phenylalanine, precursors for the phenylpropanoid biosynthetic pathway, were higher in S. baicalensis than in S. lateriflora. This GC-TOF MS-based metabolic profiling approach was a viable alternative method to differentiate metabolic profiles between species.


Assuntos
Flavonoides/análise , Raízes de Plantas/química , Scutellaria/química , Cromatografia Gasosa-Espectrometria de Massas
13.
Materials (Basel) ; 17(7)2024 Mar 30.
Artigo em Inglês | MEDLINE | ID: mdl-38612101

RESUMO

This paper provides a comparison between the conventional Electromagnetic Forming (EMF) technique and the novel Electromagnetic Hydraulic Forming (EMHF) approach. The EMHF involves the use of finite element analysis coupled with the EM and arbitrary Lagrangian-Eulerian techniques analyzed through LS-DYNA. In the free-bulge configuration, EMF is influenced by the forming coil, resulting in a dead zone and uneven forming. Additionally, EMF can only be used to shape materials with high electrical conductivity. In contrast, EMHF, driven by induced hydraulic pressure from the electromagnetic field-affected drive sheet, is independent of the electrical conductivity of the material and produces dome-shaped workpieces. For rectangular die shapes, EMF is prone to collision owing to the acceleration of the blank, which results in a reduced quality owing to bouncing. However, EMHF exhibits no bouncing effect and successfully achieves the target shape in most cases. The two techniques differ in the strain rate, with EMF at 4850/s, whereas EMHF operates at approximately 1250/s. Despite being slower, EMHF is still a high-speed forming technique. In conclusion, EMHF is a promising technique capable of addressing the shortcomings of conventional EMF and achieving improvements in forming processes.

14.
BMC Genomics ; 14: 802, 2013 Nov 19.
Artigo em Inglês | MEDLINE | ID: mdl-24252158

RESUMO

BACKGROUND: Lycium chinense is well known in traditional Chinese herbal medicine for its medicinal value and composition, which have been widely studied for decades. However, further research on Lycium chinense is limited due to the lack of transcriptome and genomic information. RESULTS: The transcriptome of L. chinense was constructed by using an Illumina HiSeq 2000 sequencing platform. All 56,526 unigenes with an average length of 611 nt and an N50 equaling 848 nt were generated from 58,192,350 total raw reads after filtering and assembly. Unigenes were assembled by BLAST similarity searches and annotated with Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) orthology identifiers. Using these transcriptome data, the majority of genes that are associated with phenylpropanoid biosynthesis in L. chinense were identified. In addition, phenylpropanoid biosynthesis-related gene expression and compound content in different organs were analyzed. We found that most phenylpropanoid genes were highly expressed in the red fruits, leaves, and flowers. An important phenylpropanoid, chlorogenic acid, was also found to be extremely abundant in leaves. CONCLUSIONS: Using Illumina sequencing technology, we have identified the function of novel homologous genes that regulate metabolic pathways in Lycium chinense.


Assuntos
Antocianinas/biossíntese , Vias Biossintéticas/genética , Flavonoides/biossíntese , Lycium/metabolismo , Transcriptoma , Mapeamento de Sequências Contíguas , Perfilação da Expressão Gênica , Ontologia Genética , Genes de Plantas , Lignina/biossíntese , Lycium/genética , Medicina Tradicional Chinesa , Anotação de Sequência Molecular , Especificidade de Órgãos , Plantas Medicinais/genética , Plantas Medicinais/metabolismo
15.
Mol Biol Rep ; 40(1): 281-8, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-23065217

RESUMO

An efficient transformation protocol was developed for Agrobacterium-mediated transformation of Phellodendron amurense Rupr. for using explants from mature seeds. The binary vector pCAMBIA1303, which contained hygromycin phosphotransferase (hptII) as a selectable marker gene and ß-glucuronidase (GUS) as a reporter gene, was used for transformation studies. Different factors that affect survival of transformed buds, namely Agrobacterium infection method, bacterial strain, pre-culture duration, acetosyringone concentration, co-culture duration, and co-culture temperature were examined and optimized for transformation efficiency on the basis of GUS staining of hygromycin-resistant buds. Polymerase chain reaction (PCR), Southern blot and reverse transcription PCR confirmed the presence of the GUS gene. A transformation frequency of 13.1 % was achieved under optimized conditions for transformation (A. tumefaciens strain EHA105, 4 days co-cultivation at 4 °C, and infection of the pre-cultured mature-seed explants for 2 days). This is the first report of a successful genetic transformation protocol for P. amurense.


Assuntos
Agrobacterium tumefaciens/fisiologia , Phellodendron/genética , Sementes/genética , Transformação Genética , Cinamatos/farmacologia , Técnicas de Cocultura , Expressão Gênica , Técnicas de Transferência de Genes , Glucuronidase/genética , Glucuronidase/metabolismo , Higromicina B/análogos & derivados , Higromicina B/farmacologia , Phellodendron/efeitos dos fármacos , Phellodendron/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Brotos de Planta/efeitos dos fármacos , Brotos de Planta/genética , Plantas Geneticamente Modificadas
16.
J Chem Ecol ; 39(6): 712-22, 2013 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-23702703

RESUMO

This study investigated the roles of jasmonates in the regulation of sorgoleone accumulation and the expression of genes involved in sorgoleone biosynthesis in sorghum roots. Both methyl jasmonate (MeJa) and jasmonic acid (JA) substantially promoted root hair formation, secondary root development, root weight, and sorgoleone accumulation in sorghum roots. Sorgoleone content varied widely depending on the concentration of JA or MeJa and the duration of their application. Root weight and sorgoleone accumulation were highest after the application of JA or MeJa at a concentration of 5.0 µM, and then declined with increasing concentrations of jasmonates. At 5.0 µM, JA and MeJa increased sorgoleone content by 4.1 and 3.4-fold, respectively. Transcript accumulation was apparent for all genes, particularly for the O-methyltransferase 3 gene, which increased in expression levels up to 8.1-fold after a 36-h exposure to MeJa and 3.5-fold after a 48-h exposure to JA. The results of this study pave the way for more effective biosynthesis of sorgoleone, an important and useful allelochemical obtained from a variety of plant species.


Assuntos
Acetatos/metabolismo , Ciclopentanos/metabolismo , Regulação da Expressão Gênica de Plantas , Genes de Plantas , Lipídeos/genética , Oxilipinas/metabolismo , Reguladores de Crescimento de Plantas/metabolismo , Sorghum/genética , Benzoquinonas/metabolismo , Cromatografia Líquida de Alta Pressão , Lipídeos/biossíntese , Raízes de Plantas/genética , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/metabolismo , Reação em Cadeia da Polimerase em Tempo Real , Sorghum/crescimento & desenvolvimento , Sorghum/metabolismo , Fatores de Tempo
17.
Molecules ; 18(7): 8682-95, 2013 Jul 22.
Artigo em Inglês | MEDLINE | ID: mdl-23881053

RESUMO

In this study, we investigated the expression of seven MYB transcription factors (a total of 17 genes that included Dof1.1, IQD1-1, MYB28, MYB29, MYB34, MYB51, and MYB122 and their isoforms) involved in aliphatic and indolic glucosinolate (GSL) biosynthesis and analyzed the aliphatic and indolic GSL content in different organs of Chinese cabbage (Brassica rapassp. Pekinensis). MYB28 and MYB29 expression in the stem was dramatically different when compared with the levels in the other organs. MYB34, MYB122, MYB51, Dof1.1, and IQD1-1 showed very low transcript levels among different organs. HPLC analysis showed that the glucosinolates (GSLs) consisted of five aliphatic GSLs (progoitrin, sinigrin, glucoalyssin, gluconapin, and glucobrassicanapin) and four indolic GSLs (4-hydroxyglucobrassicin, glucobrassicin, 4-methoxygluco-brassicin, and neoglucobrassicin). Aliphatic GSLs exhibited 63.3% of the total GSLs content, followed by aromatic GSL (19.0%), indolic GSLs (10%), and unknown GSLs (7.7%) in different organs of Chinese cabbage. The total GSL content of different parts (ranked in descending order) was as follows: seed > flower > young leaves > stem > root > old leaves. The relationship between GSLs accumulation and expression of GSLs biosynthesis MYB TFs genes in different organs may be helpful to understand the mechanism of MYB TFs regulating GSL biosynthesis in Chinese cabbage.


Assuntos
Brassica rapa/metabolismo , Glucosinolatos/biossíntese , Fatores de Transcrição/metabolismo , Arabidopsis/genética , Arabidopsis/metabolismo , Proteínas de Arabidopsis/metabolismo , Brassica rapa/genética , Proteínas de Ligação a Calmodulina/metabolismo , Proteínas de Ligação a DNA/metabolismo , Flores/genética , Flores/metabolismo , Regulação da Expressão Gênica de Plantas , Histona Acetiltransferases/metabolismo , Filogenia , Folhas de Planta/genética , Folhas de Planta/metabolismo , Raízes de Plantas/genética , Raízes de Plantas/metabolismo , Caules de Planta/genética , Caules de Planta/metabolismo , Sementes/genética , Sementes/metabolismo , Fatores de Transcrição/classificação
18.
Materials (Basel) ; 14(1)2021 Jan 04.
Artigo em Inglês | MEDLINE | ID: mdl-33406666

RESUMO

The Split-Hopkinson pressure bar (SHPB), which is used for acquiring material properties at high strain rates (102-104 s-1), requires proper specimen size selection. Under the same applied pressure, an increased S-S curve is obtained as the thickness of the specimen decreases. In this study, 1.5 t, 2.0 t, 3.0 t, 5.0 t, and 7.0 t specimens of Al6061-T6 material were tested under 1.0 bar to understand the influence of specimen thickness on the acquisition of material properties. To grasp the behavior of the SHPB test in real time, Finite Element Method (FEM) was performed using the LS-DYNA program. During the SHPB test, the impedance is increased due to the variation in the specimen area. Because of the influence of impedance, the transmitted pulse increases, and the reflected pulse decreases. As a result, the specimen is deformed in the high-strain rate region, and the S-S curve is increased as the thickness decreases. In addition, by performing the test under different pressure conditions that created similar strain rate regions, the material properties remained constant with thickness variations.

19.
ACS Omega ; 6(19): 12820-12830, 2021 May 18.
Artigo em Inglês | MEDLINE | ID: mdl-34056433

RESUMO

Platycodon grandiflorum is a perennial plant that has been used for medicinal purposes. Specifically, it is widely used in Northern China and Korea for the treatment of various diseases. Terpenoids belong to a group called secondary metabolites and have attracted a wide range of interest. Here, we determined the expressed sequence tag (EST) library of the methyl jasmonate (MeJA)-treated hairy root of P. grandiflorum. In total, 5760 ESTs were obtained, but after deleting the vector sequences and removing poor-quality sequences, a total of 2536 ESTs were attained. Of these, 811 contigs and 1725 singletons were annotated. The data were further analyzed with a focus on the gene families of the terpenoid biosynthetic pathway (TBP). We identified and characterized four TBP genes; among these were three full-length cDNAs encoding PgHMGS, PgMK, and PgMVD, whereas PgHMGR had a partial sequence based on the EST library database. Phylogenetic analysis and a pairwise identity matrix showed that these identified genes were closely related to those of other higher plants. Moreover, the tertiary structure and multiple alignment analysis showed that several distinct conserved motifs were present. Quantitative reverse transcription-polymerase chain reaction results revealed that TBP genes were constitutively expressed in all organs of P. grandiflorum, while the expression of transcript levels of these genes varied distinctly among the organs. Additionally, the total amount of platycosides was highly detected in the root, accumulating in concentrations 7.8 and 2.6 times higher than in the hairy root and stem, respectively, and 1.4 times higher than in the leaf and flower. The highest amount of total phytosterols was found to accumulate in the leaves at 9.3, 9.1, 1.8, and 1.6 times higher than that of the stem, root, hairy root, and flower, respectively. After the hairy root was exposed to the MeJA treatment, the transcript levels of PgHMGS, PgHMGR, PgMK, and PgMVD had significantly increased. The highest level of transcript accumulation occurred at 3 h after initial exposure for most of the genes. Meanwhile, triterpene saponin accumulation increased with the increase in the time of exposure, and at 48 h after initial exposure, the total saponin content was the highest recorded.

20.
3 Biotech ; 11(7): 337, 2021 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-34221808

RESUMO

2-C-Methyl-d-erythrol-4-phosphate (MEP) pathway in plant supplies isoprene building blocks for carotenoids and chlorophylls essential in photosynthesis as well as plant hormones such as gibberellin and abscisic acid. To assess the effect of overexpression of the terminal enzyme of the MEP pathway, 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate reductase (HDR), transgenic Nicotiana tabacum overexpressing class 2 HDR from Ginkgo biloba (GbHDR2) under the control of 35S promoter was constructed. Contents of chlorophylls a and b in transgenic tobacco were enhanced by 19 and 7%, respectively, compared to those of the wild type. The carotenoid level was also 18% higher than that in the control plant. As a result, photosynthetic rate of the transgenic tobacco was increased by up to 51%. Diterepenoid duvatrienediol content of transgenic tobacco was also elevated by at least sixfold. To explore the molecular basis of the enhanced isoprenoid accumulation, transcript levels of the key genes involved in the isoprenoid biosynthesis were measured. Transcript levels of geranylgeranyl diphosphate synthase (GGPP), kaurene synthase (KS), gibberellic acid 20 oxidase (GA20ox), and phytoene desaturase (PD) genes in the transgenic tobacco leaves were about twofold higher compared to the wild type. Therefore, upregulation of down-stream genes involved in biosynthesis of di- and tetraterpenoids due to GbHDR2 overexpression was responsible for elevated production of isoprenoids and enhanced photosynthetic rate. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s13205-021-02887-5.

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