Detalhe da pesquisa
1.
Comprehensive Research on Druggable Proteins: From PSSM to Pre-Trained Language Models.
Int J Mol Sci
; 25(8)2024 Apr 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-38674091
2.
Lysine-Specific Demethylase 1 Inhibitors: A Comprehensive Review Utilizing Computer-Aided Drug Design Technologies.
Molecules
; 29(2)2024 Jan 22.
Artigo
em Inglês
| MEDLINE | ID: mdl-38276629
3.
Unraveling the Binding Mode of Cyclic Adenosine-Inosine Monophosphate (cAIMP) to STING through Molecular Dynamics Simulations.
Molecules
; 29(11)2024 Jun 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-38893524
4.
Population genomics of an icefish reveals mechanisms of glacier-driven adaptive radiation in Antarctic notothenioids.
BMC Biol
; 20(1): 231, 2022 10 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-36224580
5.
DeepmRNALoc: A Novel Predictor of Eukaryotic mRNA Subcellular Localization Based on Deep Learning.
Molecules
; 28(5)2023 Mar 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-36903531
6.
Salt effect on thermodynamics and kinetics of a single RNA base pair.
RNA
; 26(4): 470-480, 2020 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-31988191
7.
Design Two Novel Tetrahydroquinoline Derivatives against Anticancer Target LSD1 with 3D-QSAR Model and Molecular Simulation.
Molecules
; 27(23)2022 Nov 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-36500451
8.
Effects of the PIWI/MID domain of Argonaute protein on the association of miRNAi's seed base with the target.
RNA
; 25(5): 620-629, 2019 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-30770397
9.
BiLSTM-5mC: A Bidirectional Long Short-Term Memory-Based Approach for Predicting 5-Methylcytosine Sites in Genome-Wide DNA Promoters.
Molecules
; 26(24)2021 Dec 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-34946497
10.
iT4SE-EP: Accurate Identification of Bacterial Type IV Secreted Effectors by Exploring Evolutionary Features from Two PSI-BLAST Profiles.
Molecules
; 26(9)2021 Apr 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-33923273
11.
Effects of flanking regions on HDV cotranscriptional folding kinetics.
RNA
; 24(9): 1229-1240, 2018 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-29954950
12.
Predicting Apoptosis Protein Subcellular Locations based on the Protein Overlapping Property Matrix and Tri-Gram Encoding.
Int J Mol Sci
; 20(9)2019 May 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-31083553
13.
GC bias lead to increased small amino acids and random coils of proteins in cold-water fishes.
BMC Genomics
; 19(1): 315, 2018 May 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-29720106
14.
The nearest neighbor and next nearest neighbor effects on the thermodynamic and kinetic properties of RNA base pair.
J Chem Phys
; 148(4): 045101, 2018 Jan 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-29390847
15.
Genomic and transcriptomic analyses reveal distinct biological functions for cold shock proteins (VpaCspA and VpaCspD) in Vibrio parahaemolyticus CHN25 during low-temperature survival.
BMC Genomics
; 18(1): 436, 2017 06 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-28583064
16.
Prediction of protein structural class using tri-gram probabilities of position-specific scoring matrix and recursive feature elimination.
Amino Acids
; 47(3): 461-8, 2015 Mar.
Artigo
em Inglês
| MEDLINE | ID: mdl-25583603
17.
Prediction of subcellular location of apoptosis proteins combining tri-gram encoding based on PSSM and recursive feature elimination.
J Theor Biol
; 366: 8-12, 2015 Feb 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-25463695
18.
Prediction of Protein Structural Class Based on Gapped-Dipeptides and a Recursive Feature Selection Approach.
Int J Mol Sci
; 17(1)2015 Dec 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-26712737
19.
Insights into Vibrio parahaemolyticus CHN25 response to artificial gastric fluid stress by transcriptomic analysis.
Int J Mol Sci
; 15(12): 22539-62, 2014 Dec 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-25490137
20.
NCSP-PLM: An ensemble learning framework for predicting non-classical secreted proteins based on protein language models and deep learning.
Math Biosci Eng
; 21(1): 1472-1488, 2024 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-38303473