Detalhe da pesquisa
1.
A pathogen-specific isotope tracing approach reveals metabolic activities and fluxes of intracellular Salmonella.
PLoS Biol
; 21(8): e3002198, 2023 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-37594988
2.
Rethinking 13C-metabolic flux analysis - The Bayesian way of flux inference.
Metab Eng
; 83: 137-149, 2024 May.
Artigo
em Inglês
| MEDLINE | ID: mdl-38582144
3.
One-shot 13 C15 N-metabolic flux analysis for simultaneous quantification of carbon and nitrogen flux.
Mol Syst Biol
; 19(3): e11099, 2023 03 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-36705093
4.
Practical sampling of constraint-based models: Optimized thinning boosts CHRR performance.
PLoS Comput Biol
; 19(8): e1011378, 2023 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-37566638
5.
PolyRound: polytope rounding for random sampling in metabolic networks.
Bioinformatics
; 38(2): 566-567, 2022 01 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-34329395
6.
HOPS: high-performance library for (non-)uniform sampling of convex-constrained models.
Bioinformatics
; 37(12): 1776-1777, 2021 07 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-33045081
7.
Communities of Niche-optimized Strains (CoNoS) - Design and creation of stable, genome-reduced co-cultures.
Metab Eng
; 73: 91-103, 2022 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-35750243
8.
Reversible jump MCMC for multi-model inference in Metabolic Flux Analysis.
Bioinformatics
; 36(1): 232-240, 2020 01 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-31214716
9.
When a single lineage is not enough: Uncertainty-Aware Tracking for spatio-temporal live-cell image analysis.
Bioinformatics
; 35(7): 1221-1228, 2019 04 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-30184044
10.
mycelyso - high-throughput analysis of Streptomyces mycelium live cell imaging data.
BMC Bioinformatics
; 20(1): 452, 2019 Sep 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-31484491
11.
Separation of 13C- and 15N-Isotopologues of Amino Acids with a Primary Amine without Mass Resolution by Means of O-Phthalaldehyde Derivatization and Collision Induced Dissociation.
Anal Chem
; 91(21): 13407-13417, 2019 11 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-31577133
12.
A Pareto approach to resolve the conflict between information gain and experimental costs: Multiple-criteria design of carbon labeling experiments.
PLoS Comput Biol
; 14(10): e1006533, 2018 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-30379837
13.
Stage-specific metabolic features of differentiating neurons: Implications for toxicant sensitivity.
Toxicol Appl Pharmacol
; 354: 64-80, 2018 09 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-29278688
14.
To be certain about the uncertainty: Bayesian statistics for 13 C metabolic flux analysis.
Biotechnol Bioeng
; 114(11): 2668-2684, 2017 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-28695999
15.
Live cell imaging of SOS and prophage dynamics in isogenic bacterial populations.
Mol Microbiol
; 98(4): 636-50, 2015 Nov.
Artigo
em Inglês
| MEDLINE | ID: mdl-26235130
16.
Visual workflows for 13C-metabolic flux analysis.
Bioinformatics
; 31(3): 346-54, 2015 Feb 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-25297067
17.
Vizardous: interactive analysis of microbial populations with single cell resolution.
Bioinformatics
; 31(23): 3875-7, 2015 Dec 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-26261223
18.
Natural isotope correction of MS/MS measurements for metabolomics and (13)C fluxomics.
Biotechnol Bioeng
; 113(5): 1137-47, 2016 May.
Artigo
em Inglês
| MEDLINE | ID: mdl-26479486
19.
Metabolic engineering of Corynebacterium glutamicum for methanol metabolism.
Appl Environ Microbiol
; 81(6): 2215-25, 2015 Mar.
Artigo
em Inglês
| MEDLINE | ID: mdl-25595770
20.
Spatiotemporal microbial single-cell analysis using a high-throughput microfluidics cultivation platform.
Cytometry A
; 87(12): 1101-15, 2015 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-26348020