Detalhe da pesquisa
1.
Bayesian modelling of time series data (BayModTS)-a FAIR workflow to process sparse and highly variable data.
Bioinformatics
; 40(5)2024 May 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-38741151
2.
On the accuracy of the epigenetic copy machine: comprehensive specificity analysis of the DNMT1 DNA methyltransferase.
Nucleic Acids Res
; 51(13): 6622-6633, 2023 07 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-37246710
3.
The impossible challenge of estimating non-existent moments of the Chemical Master Equation.
Bioinformatics
; 39(39 Suppl 1): i440-i447, 2023 06 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-37387158
4.
Quasi-Entropy Closure: a fast and reliable approach to close the moment equations of the Chemical Master Equation.
Bioinformatics
; 38(18): 4352-4359, 2022 09 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-35916726
5.
Inference of finite mixture models and the effect of binning.
Stat Appl Genet Mol Biol
; 18(4)2019 07 26.
Artigo
em Inglês
| MEDLINE | ID: mdl-31348764
6.
The tumor suppressor protein DLC1 maintains protein kinase D activity and Golgi secretory function.
J Biol Chem
; 293(37): 14407-14416, 2018 09 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-30045871
7.
The role of stochastic sequestration dynamics for intrinsic noise filtering in signaling network motifs.
J Theor Biol
; 455: 86-96, 2018 10 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-30017944
8.
MEMO: multi-experiment mixture model analysis of censored data.
Bioinformatics
; 32(16): 2464-72, 2016 08 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-27153627
9.
MCMC_CLIB-an advanced MCMC sampling package for ODE models.
Bioinformatics
; 30(20): 2991-2, 2014 Oct 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-25005749
10.
Hamiltonian Monte Carlo methods for efficient parameter estimation in steady state dynamical systems.
BMC Bioinformatics
; 15: 253, 2014 Jul 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-25066046
11.
iVUN: interactive Visualization of Uncertain biochemical reaction Networks.
BMC Bioinformatics
; 14 Suppl 19: S2, 2013.
Artigo
em Inglês
| MEDLINE | ID: mdl-24564335
12.
Trajectory-oriented Bayesian experiment design versus Fisher A-optimal design: an in depth comparison study.
Bioinformatics
; 28(18): i535-i541, 2012 Sep 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-22962478
13.
Modeling sphingomyelin synthase 1 driven reaction at the Golgi apparatus can explain data by inclusion of a positive feedback mechanism.
J Theor Biol
; 337: 174-80, 2013 Nov 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-24001971
14.
The effect of normalisation and error model choice on the distribution of the maximum likelihood estimator for a biochemical reaction.
IET Syst Biol
; 17(1): 1-13, 2023 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-36440585
15.
Bayesian estimation reveals that reproducible models in Systems Biology get more citations.
Sci Rep
; 13(1): 2695, 2023 02 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-36792648
16.
A Provably Convergent Control Closure Scheme for the Method of Moments of the Chemical Master Equation.
J Chem Theory Comput
; 19(24): 9049-9059, 2023 Dec 26.
Artigo
em Inglês
| MEDLINE | ID: mdl-38051675
17.
Reversible switching and stability of the epigenetic memory system in bacteria.
FEBS J
; 290(8): 2115-2126, 2023 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-36416580
18.
ROSIE: RObust Sparse ensemble for outlIEr detection and gene selection in cancer omics data.
Stat Methods Med Res
; 31(5): 947-958, 2022 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-35072570
19.
Model-Based Design of a Synthetic Oscillator Based on an Epigenetic Methylation Memory System.
ACS Synth Biol
; 11(7): 2445-2455, 2022 07 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-35749318
20.
Flanking sequences influence the activity of TET1 and TET2 methylcytosine dioxygenases and affect genomic 5hmC patterns.
Commun Biol
; 5(1): 92, 2022 01 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-35075236