Detalhe da pesquisa
1.
RegulonDB v12.0: a comprehensive resource of transcriptional regulation in E. coli K-12.
Nucleic Acids Res
; 52(D1): D255-D264, 2024 Jan 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-37971353
2.
Programmatic access to bacterial regulatory networks with regutools.
Bioinformatics
; 36(16): 4532-4534, 2020 08 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-32573705
3.
RegulonDB v 10.5: tackling challenges to unify classic and high throughput knowledge of gene regulation in E. coli K-12.
Nucleic Acids Res
; 47(D1): D212-D220, 2019 01 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-30395280
4.
The transcriptional regulator SsrB is involved in a molecular switch controlling virulence lifestyles of Salmonella.
PLoS Pathog
; 13(7): e1006497, 2017 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-28704543
5.
A unified resource for transcriptional regulation in Escherichia coli K-12 incorporating high-throughput-generated binding data into RegulonDB version 10.0.
BMC Biol
; 16(1): 91, 2018 08 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-30115066
6.
RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond.
Nucleic Acids Res
; 44(D1): D133-43, 2016 Jan 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-26527724
7.
RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more.
Nucleic Acids Res
; 41(Database issue): D203-13, 2013 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-23203884
8.
In silico identification and experimental characterization of regulatory elements controlling the expression of the Salmonella csrB and csrC genes.
J Bacteriol
; 196(2): 325-36, 2014 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-24187088
9.
Flexible gold standards for transcription factor regulatory interactions in Escherichia coli K-12: architecture of evidence types.
Front Genet
; 15: 1353553, 2024.
Artigo
em Inglês
| MEDLINE | ID: mdl-38505828
10.
Theoretical and empirical quality assessment of transcription factor-binding motifs.
Nucleic Acids Res
; 39(3): 808-24, 2011 Feb.
Artigo
em Inglês
| MEDLINE | ID: mdl-20923783
11.
RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units).
Nucleic Acids Res
; 39(Database issue): D98-105, 2011 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-21051347
12.
A Gold Standard for Transcription Factor Regulatory Interactions in Escherichia coli K-12: Architecture of Evidence Types.
bioRxiv
; 2023 Dec 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-37163020
13.
RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12.
Microb Genom
; 8(5)2022 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-35584008
14.
Transcriptional regulation shapes the organization of genes on bacterial chromosomes.
Nucleic Acids Res
; 37(11): 3680-8, 2009 Jun.
Artigo
em Inglês
| MEDLINE | ID: mdl-19372274
15.
Lisen&Curate: A platform to facilitate gathering textual evidence for curation of regulation of transcription initiation in bacteria.
Biochim Biophys Acta Gene Regul Mech
; 1864(11-12): 194753, 2021.
Artigo
em Inglês
| MEDLINE | ID: mdl-34461312
16.
RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.
Nucleic Acids Res
; 36(Database issue): D120-4, 2008 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-18158297
17.
Coordination logic of the sensing machinery in the transcriptional regulatory network of Escherichia coli.
Nucleic Acids Res
; 35(20): 6963-72, 2007.
Artigo
em Inglês
| MEDLINE | ID: mdl-17933780
18.
Immunity related genes in dipterans share common enrichment of AT-rich motifs in their 5' regulatory regions that are potentially involved in nucleosome formation.
BMC Genomics
; 9: 326, 2008 Jul 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-18613977
19.
Internal versus external effector and transcription factor gene pairs differ in their relative chromosomal position in Escherichia coli.
J Mol Biol
; 368(1): 263-72, 2007 Apr 20.
Artigo
em Inglês
| MEDLINE | ID: mdl-17321548
20.
RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions.
Nucleic Acids Res
; 34(Database issue): D394-7, 2006 Jan 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-16381895