Quantitative trait loci for resistance to trichostrongylid infection in Spanish Churra sheep.

BACKGROUND: For ruminants reared on grazing systems, gastrointestinal nematode (GIN) parasite infections represent the class of diseases with the greatest impact on animal health and productivity. Among the many possible strategies for controlling GIN infection, the enhancement of host resistance through the selection of resistant animals has been suggested by many authors. Because of the difficulty of routinely collecting phenotypic indicators of parasite resistance, information derived from molecular markers may be used to improve the efficiency of classical genetic breeding. METHODS: A total of 181 microsatellite markers evenly distributed along the 26 sheep autosomes were used in a genome scan analysis performed in a commercial population of Spanish Churra sheep to detect chromosomal regions associated with parasite resistance. Following a daughter design, we analysed 322 ewes distributed in eight half-sib families. The phenotypes studied included two faecal egg counts (LFEC0 and LFEC1), anti-Teladorsagia circumcincta LIV IgA levels (IgA) and serum pepsinogen levels (Peps). RESULTS: The regression analysis revealed one QTL at the 5% genome-wise significance level on chromosome 6 for LFEC1 within the marker interval BM4621-CSN3. This QTL was found to be segregating in three out of the eight families analysed. Four other QTL were identified at the 5% chromosome-wise level on chromosomes 1, 10 and 14. Three of these QTL influenced faecal egg count, and the other one had an effect on IgA levels. CONCLUSION: This study has successfully identified segregating QTL for parasite resistance traits in a commercial population. For some of the QTL detected, we have identified interesting coincidences with QTL previously reported in sheep, although most of those studies have been focused on young animals. Some of these coincidences might indicate that some common underlying loci affect parasite resistance traits in different sheep breeds. The identification of new QTL may suggest the existence of complex host-parasite relationships that have unique features depending on the host-parasite combination, perhaps due to the different mechanisms underlying resistance in adult sheep (hypersensitivity reactions) and lambs (immunity). The most significant QTL identified on chromosome 6 for LFEC(1) may be the target for future fine-mapping research efforts.

Evidence of three maternal lineages in Near Eastern sheep supporting multiple domestication events.

The variability of mtDNA was analysed in local sheep breeds reared throughout Turkey, for which a fragment of the D-loop region and the complete cytochrome b were sequenced. Phylogenetic analyses performed independently for the D-loop and the Cyt b gene revealed three clearly separated clusters indicating three major maternal lineages, two of which had been previously described as types B and A. The new type, C, was present in all the breeds analysed and showed considerable mtDNA variability. Divergence time was obtained on the basis of Cyt b gene and was estimated to be around 160,000-170,000 years ago for lineages B and A, whereas the divergence of lineage C proved to have occurred earlier (between 450,000 and 750,000 years ago). These times greatly predate domestication and suggest that the origin of modern sheep breeds was more complex than previously thought and that at least three independent sheep domestication events occurred. Our results, together with archaeological information and the current wild sheep populations in the Near East region support the high importance of this area in the sheep domestication process. Finally, the evidence of a third maternal lineage has important implications regarding the history of modern sheep.

Mitochondrial diversity and the origin of Iberian sheep.

Mitochondrial DNA diversity was analysed in 19 Iberian and six foreign sheep breeds. Three mtDNA lineages (B, A and C) were found in the Iberian sheep, with type B clearly predominating over the others. The results were analysed for each of the morphologically determined breed groups in Iberian sheep: Merino, Entrefino, Churro and Iberian trunks. MtDNA lineage C was found only in the Iberian trunk composed of Montesina and Ojalada. These two populations had high mtDNA variability, and in the Iberian sheep only Merino Branco had more variation. The other three Merino types studied showed moderate variability, including the most authentic Merino, the Spanish Merino. These three Merinos clustered closely in a multidimensional scaling representation of distances, while the fourth breed (Merino Branco) showed a clear separation. As for the other two trunks, breeds from the Churro group showed greater maternal uniformity while results for populations included in the so-called Entrefino trunk seemed to have a more heterogeneous maternal origin. The results obtained are discussed with available data from nuclear markers and with morphological classifications, and all this information is analysed in relation to the origin of the different Iberian sheep breeds.

Genetic relationships among Turkish sheep.

Genetic relationships among Turkish sheep breeds were analysed on the basis of 30 microsatellite markers. Phylogenetic analyses based on the estimation of genetic distances revealed the closest relationships for the Akkaraman, Morkaraman and Tuj breeds, which were clearly differentiated from the others in the dendrogram. Our pattern was completely confirmed by results from the Factorial Correspondence Analysis. All the results described analysing either population parameters or individuals revealed a clear separation between the fat-tailed group and the others. These results, based on nuclear DNA, are discussed along with those already reported for these breeds through the investigation of mitochondrial DNA, which had revealed the invaluable significance of the genetic background of these Turkish sheep.

Genetic parameters for lactation traits of milking ewes: protein content and composition, fat, somatic cells and individual laboratory cheese yield.

The effects of some environmental variation factors and the genetic parameters for total milk traits (fat content, protein content, casein content, serum protein content, lactation mean of individual laboratory cheese yield (LILCY), lactation mean of somatic cell count (LSCC), and milk yield) were estimated from the records of 1,111 Churra ewes. Genetic parameters were estimated by multivariate REML. Heritability for fat content was low (0.10) as is usually found in the Churra breed. Heritabilities for protein content, casein content, serum protein content, LILCY, milk yield and somatic cell count were 0.31, 0.30, 0.22, 0.09, 0.26 and 0.11, respectively. The highest heritability estimates were for protein and casein contents. Casein content is not advisable as an alternative to protein content as a selection criterion for cheese yield improvement; it does not have any compelling advantages and its measurement is costly. Our results for LSCC indicated that efforts should focus on improving the level of management rather than selecting for somatic cells, in the actual conditions of the Churra breed.

Effects of selective and complete dry therapy on prevalence of intramammary infection and on milk yield in the subsequent lactation in dairy ewes.

The study was carried out in a commercial flock on 286 Churra breed ewes (566 half-udders) assigned to three lots depending on the type of antibiotic dry therapy received in the lactation previous to the one studied. One-hundred-and-four ewes were given complete therapy in all udders, 103 received selective therapy of infected half-udders, and 79 received no therapy at all. Half-udders of all animals were sampled for bacteriological study at < or = 72 h (lambing), 60 d, 120 d, and 155 d (drying-off) post partum. Dry therapy, parity number, lactation stage and therapy x parity interaction contributed significantly to variation in intramammary infection prevalence. Antibiotic dry therapy had the most significant effect. Prevalence during the whole of the subsequent lactation was significantly lower in lots receiving complete (18.8%) and selective (15.6%) dry therapy than in the untreated control lot (48.3%). Coagulase-negative staphylococci and streptococci (in particular Streptococcus agalactiae) were the organisms most significantly affected by dry therapy. In untreated ewes, prevalence increased noticeably from the 2nd to the 6th and subsequent lactations, but no significant changes were observed in the treated lots. Milk yield in the dry treated lots was 6.9% higher that in the untreated one. It was concluded that complete and selective treatments of ewes at drying-off were efficient and comparable methods of reducing the intramammary infection prevalence, improving bacteriological quality of milk, and increasing milk yield.

Losses of precision associated with simplified designs of milk recording for dairy ewes.

Simplified designs of milk yield recording based on the yield of a single monthly milking, adjusted or not for interval between milkings and for production level, were simulated and evaluated for 3173 ewe-test-day records belonging to 155 lactations of Churra dairy ewes. Losses of precision associated with simplified methods were evaluated by comparing estimated lactation yields with those observed both in a reference plan, where the two daily milkings were recorded at weekly intervals, and in the official A4 milk recording (monthly records of the two daily milkings). Estimates of lactation yields were less precise when the usual monthly designs were compared with a weekly sampling of both a.m. and p.m. milkings. The losses of precision were high at 9.4-36.2% including the A4 plan. The yield from only the milking period was more predictable than milk yield from the whole lactation (suckling and milking periods) and should consequently be adopted in dairy ewes. All options with one daily milking every month were more accurate when the corresponding plan was based on, or began with, the a.m. milking (loss of precision 14.9-15.8%). There was no evidence of improvement in sampling accuracy by adjusting for the preceding interval between milkings or production level. For practical and economic reasons, the design alternating a.m. and p.m. milkings every month, without adjustment, is suggested for ovine milk recording.