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1.
Int J Colorectal Dis ; 35(7): 1343-1346, 2020 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-32152670

RESUMO

PURPOSE: Polyps are a common finding on colonoscopy procedures. After completing polypectomy, patients are to be followed up with endoscopy. The purpose of the study was to assess the adherence of gastroenterologists to international post-polypectomy guidelines. METHODS: Israeli gastroenterologists answered a questionnaire, consisting of 30 items, regarding the recommendation for post-polypectomy surveillance following colonoscopy. RESULTS: One hundred and twelve gastroenterologists, representing 23% of the total number of Israeli gastroenterologists, participated in this study, by responding to the web-based questionnaire (mean age is 47 ± 10 years, males, 74 (66%)). From the total responses, 57.4% were compatible with the updated European post-polypectomy guidelines. The recommendations appeared remarkably inappropriate when applied to polyps that were identified as having low-risk tubular adenoma, tubular adenoma with high-grade dysplasia, and small serrated adenoma. In 37.2% of questionnaires, the recommended time to follow-up colonoscopy was shorter than currently stated in the guidelines. The appropriate polypectomy technique was chosen by 62% of the responses. Gastroenterologists younger than 45 years of age adhered more strongly to the international guidelines, particularly in cases of piecemeal polypectomy or high-risk adenoma polypectomy. CONCLUSIONS: Gastroenterologists follow the clinical guidelines for post-polypectomy surveillance intervals partially. 57.4% of the recommendations were compatible with the guidelines, whereas 37% of the recommendations were for shorter interval.


Assuntos
Adenoma , Pólipos do Colo , Neoplasias Colorretais , Gastroenterologistas , Adulto , Pólipos do Colo/diagnóstico , Pólipos do Colo/cirurgia , Colonoscopia , Neoplasias Colorretais/diagnóstico , Neoplasias Colorretais/cirurgia , Humanos , Masculino , Pessoa de Meia-Idade
2.
Clin Exp Nephrol ; 22(1): 151-158, 2018 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-28456864

RESUMO

BACKGROUND: Dialysis patients have a suboptimal response to hepatitis B (HBV) vaccination. This study aimed to compare the immunogenicity of two vaccines: the third-generation Sci-B-Vac™ vs. the second-generation Engerix B®. The cohort included two groups of dialysis patients: naïve and previously vaccinated non-responders. Primary endpoints were antibody titers ≥10 IU/L at 3 and 7 month post-vaccination. Secondary objectives were seroprotection rates in vaccine-naïve patients and in previously vaccinated non-responders. METHODS: Eighty-six patients were assigned to vaccine (Sci-B-Vac™ or Engerix B®) using computer-generated randomization, stratified by age, gender, diabetes, and previous HBV vaccination. Sci-B-Vac™ was administered in three doses, 10 µg, at 0, 1, and 6 months in naïve patients; or 20 µg in previously vaccinated non-responders. Engerix B® included four doses, 40 µg at 0, 1, 2, and 6 months. RESULTS: Each group had 43 patients. Seroconversion was 69.8% with Engerix B® vs. 73.2% with Sci-B-Vac™. Antibody titers at 7 months were higher with Sci-B-Vac™ (266.4 ± 383.9, median 53.4) than with Engerix® (193.2 ± 328.9, median 19). However, these differences were not significant, perhaps due to a suboptimal sample size. CONCLUSIONS: This study suggests comparable immunogenicity for both vaccines. Thus, we cannot reject the null hypothesis that there is no difference in seroconversion by vaccine type. It is noteworthy that naïve patients were vaccinated with a standard dose of Sci-B-Vac™, while Engerix B® was administered at a double dose. Similarly, although mean antibody titer levels in the Sci-B-Vac™ group were higher than in the Engerix® group, this difference did not reach significance. Consequently, a future clinical trial should recruit a larger cohort of patients, using a standard double-dose protocol in both groups.


Assuntos
Proteínas do Capsídeo/imunologia , Vacinas contra Hepatite B/imunologia , Nefropatias/imunologia , Nefropatias/terapia , Diálise Renal , Idoso , Idoso de 80 Anos ou mais , Proteínas do Capsídeo/efeitos adversos , Estudos de Coortes , Feminino , Hepatite B/prevenção & controle , Vacinas contra Hepatite B/efeitos adversos , Humanos , Masculino , Pessoa de Meia-Idade , Soroconversão
3.
Eur J Clin Microbiol Infect Dis ; 35(9): 1469-73, 2016 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-27272123

RESUMO

Rapid identification of the causative pathogen in patients with bacteremia allows adjustment of antibiotic therapy and improves patient outcomes. We compared in vitro and real-life time to detection (TTD) of two blood culture media, BacT/Alert FA (FA) and BacT/Alert FA Plus (FA Plus), for the nine most common species of bacterial pathogens recovered from blood samples. Experimental data from simulated cultures was compared with microbiology records of TTD for both culture media with growth of the species of interest in clinical blood cultures. In the experimental conditions, median TTD was 3.8 hours (23.9 %) shorter using FA Plus media. The magnitude of reduction differed between species. Similarly, in real life data, FA Plus had shorter TTD than FA media; however, the difference between culture media was smaller, and median TTD was only 1 hour (8.5 %) less. We found shorter TTD with BacT/Alert FA Plus culture media, both experimentally and in real-life conditions and unrelated to antibiotic neutralization, highlighting the importance of appropriate blood culture media selection.


Assuntos
Bacteriemia/diagnóstico , Hemocultura/métodos , Meios de Cultura/química , Humanos , Estudos Retrospectivos , Fatores de Tempo
4.
Br J Anaesth ; 115(5): 784-91, 2015 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-26475807

RESUMO

BACKGROUND: Matrix-metalloproteinases (MMP) and cancer cell invasion are crucial for solid tumour metastasis. Important signalling events triggered by inflammatory cytokines, such as tumour necrosis factor α (TNFα), include Src-kinase-dependent activation of Akt and focal adhesion kinase (FAK) and phosphorylation of caveolin-1. Based on previous studies where we demonstrated amide-type local anaesthetics block TNFα-induced Src activation in malignant cells, we hypothesized that local anaesthetics might also inhibit the activation and/or phosphorylation of Akt, FAK and caveolin-1, thus attenuating MMP release and invasion of malignant cells. METHODS: NCI-H838 lung adenocarcinoma cells were incubated with ropivacaine or lidocaine (1 nM-100 µM) in absence/presence of TNFα (20 ng ml(-1)) for 20 min or 4 h, respectively. Activation/phosphorylation of Akt, FAK and caveolin-1 were evaluated by Western blot, and MMP-9 secretion was determined by enzyme-linked immunosorbent assay. Tumour cell migration (electrical wound-healing assay) and invasion were also assessed. RESULTS: Ropivacaine (1 nM-100 µM) and lidocaine (1-100 µM) significantly reduced TNFα-induced activation/phosphorylation of Akt, FAK and caveolin-1 in NCI-H838 cells. MMP-9 secretion triggered by TNFα was significantly attenuated by both lidocaine and ropivacaine (half-maximal inhibitory concentration [IC50]=3.29×10(-6) M for lidocaine; IC50=1.52×10(-10) M for ropivacaine). The TNFα-induced increase in invasion was completely blocked by both lidocaine (10 µM) and ropivacaine (1 µM). CONCLUSIONS: At clinically relevant concentrations both ropivacaine and lidocaine blocked tumour cell invasion and MMP-9 secretion by attenuating Src-dependent inflammatory signalling events. Although determined entirely in vitro, these findings provide significant insight into the potential mechanism by which local anaesthetics might diminish metastasis.


Assuntos
Adenocarcinoma/patologia , Amidas/farmacologia , Anestésicos Locais/farmacologia , Lidocaína/farmacologia , Neoplasias Pulmonares/patologia , Fator de Necrose Tumoral alfa/antagonistas & inibidores , Adenocarcinoma/metabolismo , Adenocarcinoma/secundário , Adenocarcinoma de Pulmão , Caveolina 1/metabolismo , Movimento Celular/efeitos dos fármacos , Avaliação Pré-Clínica de Medicamentos/métodos , Ativação Enzimática/efeitos dos fármacos , Proteína-Tirosina Quinases de Adesão Focal/metabolismo , Humanos , Neoplasias Pulmonares/metabolismo , Neoplasias Pulmonares/secundário , Metaloproteinase 9 da Matriz/metabolismo , Invasividade Neoplásica , Proteínas de Neoplasias/metabolismo , Fosforilação/efeitos dos fármacos , Proteínas Proto-Oncogênicas c-akt/metabolismo , Ropivacaina , Células Tumorais Cultivadas , Fator de Necrose Tumoral alfa/fisiologia
5.
Gut ; 63(4): 588-97, 2014 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-23604131

RESUMO

OBJECTIVE: The incidence of inflammatory bowel disease (IBD) is increasing in Eastern Europe. The reasons for these changes remain unknown. The aim of this study was to investigate whether an East-West gradient in the incidence of IBD in Europe exists. DESIGN: A prospective, uniformly diagnosed, population based inception cohort of IBD patients in 31 centres from 14 Western and eight Eastern European countries covering a total background population of approximately 10.1 million people was created. One-third of the centres had previous experience with inception cohorts. Patients were entered into a low cost, web based epidemiological database, making participation possible regardless of socioeconomic status and prior experience. RESULTS: 1515 patients aged 15 years or older were included, of whom 535 (35%) were diagnosed with Crohn's disease (CD), 813 (54%) with ulcerative colitis (UC) and 167 (11%) with IBD unclassified (IBDU). The overall incidence rate ratios in all Western European centres were 1.9 (95% CI 1.5 to 2.4) for CD and 2.1 (95% CI 1.8 to 2.6) for UC compared with Eastern European centres. The median crude annual incidence rates per 100,000 in 2010 for CD were 6.5 (range 0-10.7) in Western European centres and 3.1 (range 0.4-11.5) in Eastern European centres, for UC 10.8 (range 2.9-31.5) and 4.1 (range 2.4-10.3), respectively, and for IBDU 1.9 (range 0-39.4) and 0 (range 0-1.2), respectively. In Western Europe, 92% of CD, 78% of UC and 74% of IBDU patients had a colonoscopy performed as the diagnostic procedure compared with 90%, 100% and 96%, respectively, in Eastern Europe. 8% of CD and 1% of UC patients in both regions underwent surgery within the first 3 months of the onset of disease. 7% of CD patients and 3% of UC patients from Western Europe received biological treatment as rescue therapy. Of all European CD patients, 20% received only 5-aminosalicylates as induction therapy. CONCLUSIONS: An East-West gradient in IBD incidence exists in Europe. Among this inception cohort--including indolent and aggressive cases--international guidelines for diagnosis and initial treatment are not being followed uniformly by physicians.


Assuntos
Doenças Inflamatórias Intestinais/epidemiologia , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Colite Ulcerativa/diagnóstico , Colite Ulcerativa/epidemiologia , Colite Ulcerativa/terapia , Colonoscopia , Doença de Crohn/diagnóstico , Doença de Crohn/epidemiologia , Doença de Crohn/terapia , Europa (Continente)/epidemiologia , Europa Oriental/epidemiologia , Feminino , Humanos , Incidência , Doenças Inflamatórias Intestinais/diagnóstico , Doenças Inflamatórias Intestinais/terapia , Masculino , Pessoa de Meia-Idade , Estudos Prospectivos , Adulto Jovem
6.
Eur J Clin Microbiol Infect Dis ; 33(11): 1909-13, 2014 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-24865248

RESUMO

The optimal method for surveillance of carbapenem-resistant Acinetobacter spp. (CRAB) is unknown. A collection of CRAB strains (n = 42), carbapenem-susceptible strains (CSAB), and non-Acinetobacter strains (n = 18) was used to evaluate six laboratory surveillance methods: MacConkey (MAC), MAC + 1 µg/ml imipenem (MAC-IPM), minimal salts agar + 1 % acetate (MSA), MSA with IPM disk (MSA-IPM), CHROMagarKPC, and CHROMagar Acinetobacter with CR102 (CHROMAcineto). CHROMAcineto was 100 % sensitive and specific. CHROMagarKPC and MAC-IPM were highly sensitive (>95 %), but their specificity was substantially hampered by the breakthrough growth of CSAB. MSA was unsuitable for CRAB detection. CHROMAcineto is a promising medium for CRAB detection and warrants further clinical evaluation.


Assuntos
Infecções por Acinetobacter/diagnóstico , Acinetobacter/isolamento & purificação , Antibacterianos/farmacologia , Técnicas Bacteriológicas/métodos , Carbapenêmicos/farmacologia , Meios de Cultura/química , Resistência beta-Lactâmica , Ágar , Humanos , Sensibilidade e Especificidade
7.
Int J Obes (Lond) ; 37(10): 1336-43, 2013 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-23797144

RESUMO

BACKGROUND: Obesity, a major risk factor for cardiometabolic disease, is associated with lower cognitive performance from childhood to senescence, especially on tasks of executive function. In the cardiovascular domain, fat stored viscerally rather than elsewhere in the body carries particularly high risk. It is unknown whether this is also true in case of obesity-cognition relationships. The aim of this study was to assess the cross-sectional relationship between visceral fat (VF) and cognitive performance in a community sample of healthy adolescents. METHODS: In a community-based sample of 983 adolescents (12-18 years old, 480 males), VF was quantified using magnetic resonance imaging, total body fat was measured using a multifrequency bioimpedance, and cognitive performance was assessed using a battery of cognitive tests measuring executive function and memory. RESULTS: We found that larger volumes of VF were associated with lower performance on six measures of executive function (P=0.0001-0.02). We also found that the association of VF with executive function was moderated by sex for a subset of measures, such that relationship was present mainly in female subjects and not in male subjects (sex-by-VF interaction: P=0.001-0.04). These relationships were independent of the quantity of total body fat and a number of potential confounders, including age, puberty stage and household income. CONCLUSIONS: Our results suggest that the adverse association between obesity and executive function may be attributed to fat stored viscerally and not to fat stored elsewhere in the body. They also suggest that female subjects compared with male subjects may be more sensitive to the potentially detrimental effects of VF on cognition.


Assuntos
Transtornos Cognitivos/etiologia , Função Executiva , Gordura Intra-Abdominal/patologia , Obesidade/complicações , Adolescente , Distribuição da Gordura Corporal , Canadá/epidemiologia , Transtornos Cognitivos/epidemiologia , Transtornos Cognitivos/fisiopatologia , Estudos Transversais , Feminino , Humanos , Masculino , Testes Neuropsicológicos , Obesidade/epidemiologia , Obesidade/fisiopatologia , Pais , Puberdade , Fatores de Risco , Fatores Sexuais , Fatores Socioeconômicos , Inquéritos e Questionários
8.
Acta Anaesthesiol Scand ; 57(10): 1211-29, 2013 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-24134442

RESUMO

Clinical and basic science studies have demonstrated the anti-inflammatory properties of local anaesthetics. Recent studies have begun to unravel molecular pathways linking inflammation and cancer. Regional anaesthesia is associated in some retrospective clinical studies with reduced risk of metastasis and increased long-term survival. The potential beneficial effects of regional anaesthesia have been attributed mainly to the inhibition of the neuroendocrine stress response to surgery and to the reduction in the requirements of volatile anaesthetics and opioids. Because cancer is linked to inflammation and local anaesthetics have anti-inflammatory effects, these agents may participate in reducing the risk of metastasis, but their mechanism of action is unknown. We demonstrated in vitro that amide local anaesthetics attenuate tumour cell migration as well as signalling pathways enhancing tumour growth and metastasis. This has provided the first evidence of a molecular mechanism by which regional anaesthesia might inhibit or reduce cancer metastases.


Assuntos
Anestesia por Condução , Anestésicos Locais/farmacologia , Metástase Neoplásica/prevenção & controle , Lesão Pulmonar Aguda/tratamento farmacológico , Animais , Anti-Inflamatórios/farmacologia , Humanos , Inflamação/complicações , NF-kappa B/fisiologia , Células Neoplásicas Circulantes
9.
J Sports Med Phys Fitness ; 53(5): 483-9, 2013 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-23903528

RESUMO

AIM: Specific physical training may improve balance control. This study aims to explore the underlying mechanisms of balance control in young Judokas compared with the type of training that does not require balance skills (swimming). METHODS: Nine young judokas and nine age-gender matched swimmers (10.5-17-year-old) participated in the cross-sectional study. Postural Stability was collected using force platform during 10 upright standing trials in each of the three conditions: eyes open, eyes closed, and standing on foam. The force platform data were sampled at a frequency of 100 Hz, than analyzed using summary statistics and Stabilogram-Diffusion Analysis (SDA) for mediolateral (ML) and anteroposterior (AP) directions. RESULTS: The results show that Judokas have better stability than swimmers in eyes closed condition but lower stability while standing on foam, with no significant differences in eyes open condition. The long-term effective diffusion coefficient of the SDA was significantly lower in judokas in all three postural task conditions. CONCLUSIONS: The results show that Judokas are able to cope with momentary loss of vision better than swimmers, and less able to compensate reduction in somatosensory cutaneous sensation (e.g. standing on foam). These results suggest that judokas are less visually dependent relying on their sensorimotor system compare with swimmers. judokas have a more effective closed-loop balance control thus able to minimize their sway. It seems that training includes unexpected perturbations of the postural control system, emphasizing sensorimotor adaptabilities.


Assuntos
Artes Marciais/fisiologia , Atividade Motora/fisiologia , Aptidão Física , Equilíbrio Postural/fisiologia , Sensação , Natação/fisiologia , Adolescente , Criança , Estudos Transversais , Feminino , Humanos , Masculino
10.
Nat Genet ; 9(4): 432-8, 1995 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-7795651

RESUMO

Optical mapping is an emerging single molecule approach for the rapid generation of ordered restriction maps, using fluorescence microscopy. We have improved the size resolution of optical mapping by imaging individual DNA molecules elongated and fixed onto derivatized glass surfaces. Averaged fluorescence intensity and apparent length measurements accurately determined the mass of restriction fragments 800 basepairs long. We have used optical mapping to create ordered restriction maps for lambda clones derived from the mouse pygmy locus.


Assuntos
Bacteriófago lambda/genética , Óptica e Fotônica , Mapeamento por Restrição , Animais , Cromossomos Artificiais de Levedura , Clonagem Molecular , DNA/química , DNA/genética , Eletroforese em Gel de Campo Pulsado , Vidro , Camundongos , Microscopia de Fluorescência , Peso Molecular , Polilisina
11.
Nat Genet ; 25(2): 187-91, 2000 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-10835634

RESUMO

There is much variability between individuals in the response to inhaled toxins, but it is not known why certain people develop disease when challenged with environmental agents and others remain healthy. To address this, we investigated whether TLR4 (encoding the toll-like receptor-4), which has been shown to affect lipopolysaccharide (LPS) responsiveness in mice, underlies the variability in airway responsiveness to inhaled LPS in humans. Here we show that common, co-segregating missense mutations (Asp299Gly and Thr399Ile) affecting the extracellular domain of the TLR4 receptor are associated with a blunted response to inhaled LPS in humans. Transfection of THP-1 cells demonstrates that the Asp299Gly mutation (but not the Thr399Ile mutation) interrupts TLR4-mediated LPS signalling. Moreover, the wild-type allele of TLR4 rescues the LPS hyporesponsive phenotype in either primary airway epithelial cells or alveolar macrophages obtained from individuals with the TLR4 mutations. Our findings provide the first genetic evidence that common mutations in TLR4 are associated with differences in LPS responsiveness in humans, and demonstrate that gene-sequence changes can alter the ability of the host to respond to environmental stress.


Assuntos
Proteínas de Drosophila , Lipopolissacarídeos/farmacologia , Macrófagos Alveolares/fisiologia , Glicoproteínas de Membrana/genética , Mutação de Sentido Incorreto/genética , Receptores de Superfície Celular/genética , Mucosa Respiratória/fisiologia , Administração por Inalação , Adolescente , Adulto , Alelos , Sequência de Aminoácidos , Sequência de Bases , Células Cultivadas , Análise Mutacional de DNA , Feminino , Volume Expiratório Forçado/efeitos dos fármacos , Humanos , Lipopolissacarídeos/administração & dosagem , Macrófagos Alveolares/efeitos dos fármacos , Masculino , Glicoproteínas de Membrana/química , Glicoproteínas de Membrana/metabolismo , Pessoa de Meia-Idade , Dados de Sequência Molecular , Receptores de Superfície Celular/química , Receptores de Superfície Celular/metabolismo , Hipersensibilidade Respiratória/induzido quimicamente , Hipersensibilidade Respiratória/genética , Hipersensibilidade Respiratória/fisiopatologia , Mucosa Respiratória/efeitos dos fármacos , Transdução de Sinais/efeitos dos fármacos , Receptor 4 Toll-Like , Receptores Toll-Like
12.
Nat Genet ; 23(3): 309-13, 1999 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-10610179

RESUMO

The unicellular parasite Plasmodium falciparum is the cause of human malaria, resulting in 1.7-2.5 million deaths each year. To develop new means to treat or prevent malaria, the Malaria Genome Consortium was formed to sequence and annotate the entire 24.6-Mb genome. The plan, already underway, is to sequence libraries created from chromosomal DNA separated by pulsed-field gel electrophoresis (PFGE). The AT-rich genome of P. falciparum presents problems in terms of reliable library construction and the relative paucity of dense physical markers or extensive genetic resources. To deal with these problems, we reasoned that a high-resolution, ordered restriction map covering the entire genome could serve as a scaffold for the alignment and verification of sequence contigs developed by members of the consortium. Thus optical mapping was advanced to use simply extracted, unfractionated genomic DNA as its principal substrate. Ordered restriction maps (BamHI and NheI) derived from single molecules were assembled into 14 deep contigs corresponding to the molecular karyotype determined by PFGE (ref. 3).


Assuntos
Genoma de Protozoário , Mapeamento Físico do Cromossomo/métodos , Plasmodium falciparum/genética , Animais , Cromossomos/genética , Cromossomos Artificiais de Levedura/genética , Mapeamento de Sequências Contíguas/métodos , Eletroforese em Gel de Campo Pulsado , Etiquetas de Sequências Expressas , Biblioteca Genômica , Processamento de Imagem Assistida por Computador , Cariotipagem/métodos , Óptica e Fotônica , Reprodutibilidade dos Testes , Mapeamento por Restrição/métodos , Sensibilidade e Especificidade
13.
Vox Sang ; 102(3): 234-42, 2012 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-22098427

RESUMO

BACKGROUND AND OBJECTIVES: One to two per cent of patients in need of red cell transfusion carry irregular antibodies to red blood cell (RBC) antigens and have to be supplied with specially selected blood units. To be able to respond to those requests, blood centres have to screen a significant number of donors for a variety of antigens serologically, which is a costly and through the shortage of reagents, also limited procedure. To make this procedure more efficient, the Austrian Red Cross has developed a genotyping assay as an alternative approach for high throughput RBC typing. MATERIALS AND METHODS: A multiplex polymerase chain reaction (PCR) assay was designed for typing 35 RBC antigens in six reaction mixes. The assay includes both common as well as high-frequency-alleles: MNS1, MNS2, MNS3 and MNS4; LU1, LU2, LU8 and LU14; KEL1, KEL2, KEL3, KEL4, KEL6, KEL7, KEL11, KEL17 and KEL21; FY1, FY2, FYB(WK) and FY0 (FYB(ES)); JK1 and JK2; DI1, DI2, DI3 and DI4; YT1 and YT2; DO1 and DO2; CO1 and CO2; IN1 and IN2. The assay was validated using 370 selected serologically typed samples. Subsequently 6000 individuals were screened to identify high frequency antigen (HFA)-negative donors and to facilitate the search for compatible blood for alloimmunized patients. RESULTS: All controls showed complete concordance for the tested markers. The screening of 6000 donors revealed 57 new HFA-negative donors and the blood group database was extended by approximately 210,000 results. CONCLUSION: The study shows that in practice, this high-throughput genotyping assay is feasible, fast and provides reliable results. Compared to serological testing, this molecular approach is also very cost-efficient.


Assuntos
Antígenos de Grupos Sanguíneos/genética , Tipagem e Reações Cruzadas Sanguíneas/métodos , Técnicas de Genotipagem/métodos , Reação em Cadeia da Polimerase/métodos , Alelos , Feminino , Humanos , Masculino
14.
Eur J Clin Microbiol Infect Dis ; 31(9): 2453-9, 2012 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-22391759

RESUMO

The purpose of this investigation was to provide a comprehensive review of the pathogenic role and spectrum of disease of milleri group streptococci, with special attention to bloodstream invasion and to possible differential roles among the three species. All consecutive isolates of milleri group streptococci from any anatomic source, during a 37-month period, in a tertiary care teaching hospital in Tel-Aviv, Israel, were thoroughly investigated. Identification to the species level was performed by an automated system.Streptococcus anginosus constituted 82% of the 245 patient-unique isolates from hospitalized patients. All nonurinary isolates were involved in pyogenic infections mostly originating from the gastrointestinal tract, with bacteremia in 28 cases. The 71 urinary isolates represented either urinary tract infection or nonsignificant bacteriuria. No specific association could be detected between species and the infection site, except for a higher relative representation of Streptococcus constellatus in bacteremia. Milleri group streptococci are common in clinical practice and play a different pathogenic role to other viridans streptococci. Due to their invariable association with pyogenic processes, their presence in blood warrants immediate focus identification. In addition, they have a previously unappreciated clinical niche concerning urinary tract infection. The identification of viridans streptococci to the species level is of paramount clinical significance.


Assuntos
Bacteriemia/microbiologia , Infecções Estreptocócicas/microbiologia , Streptococcus anginosus/patogenicidade , Streptococcus constellatus/patogenicidade , Streptococcus intermedius/patogenicidade , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Automação/métodos , Bacteriemia/epidemiologia , Bacteriemia/patologia , Técnicas Bacteriológicas/métodos , Criança , Pré-Escolar , Feminino , Gastroenterite/epidemiologia , Gastroenterite/microbiologia , Gastroenterite/patologia , Hospitais de Ensino , Humanos , Lactente , Israel/epidemiologia , Masculino , Pessoa de Meia-Idade , Prevalência , Infecções Estreptocócicas/epidemiologia , Infecções Estreptocócicas/patologia , Streptococcus anginosus/classificação , Streptococcus anginosus/isolamento & purificação , Streptococcus constellatus/classificação , Streptococcus constellatus/isolamento & purificação , Streptococcus intermedius/classificação , Streptococcus intermedius/isolamento & purificação , Centros de Atenção Terciária , Infecções Urinárias/epidemiologia , Infecções Urinárias/microbiologia , Infecções Urinárias/patologia , Adulto Jovem
15.
Eur J Clin Microbiol Infect Dis ; 31(7): 1429-33, 2012 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-22068274

RESUMO

Microbiological surveillance for detection of carbapenem-resistant A. baumannii is important, but recovery of A. baumannii is inadequate. We studied A. baumannii recovery by a particular transport system that is possibly superior over standard swabs, using reference and clinical strains. First, the recovery rates relating to the various swabs were compared with regard to various combinations of transport times (0 h, 1 h, 24 h, 48 h), storage times (0 weeks, 1 week, 2 weeks, 4 weeks) and storage temperatures (4°c,-80°c) using live counts. Second, the recovery of different inocula of strains mixed with fecal microbiota was evaluated by plating on selective medium. The new transport system exhibited a decline of <3log10 under almost all conditions studied and performed better than standard swabs under several conditions. If plated on selective media, the new transport system performed well, even after prolonged transport or with a low inoculum, and its processing could be delayed by up to 2 weeks, especially if refrigerated. The new transport system may thus enhance A. baumannii surveillance.


Assuntos
Infecções por Acinetobacter/microbiologia , Acinetobacter baumannii/efeitos dos fármacos , Acinetobacter baumannii/isolamento & purificação , Técnicas Bacteriológicas/métodos , Carbapenêmicos/farmacologia , Manejo de Espécimes/métodos , Resistência beta-Lactâmica , Antibacterianos/farmacologia , Humanos
16.
Proc Natl Acad Sci U S A ; 106(43): 18125-30, 2009 Oct 27.
Artigo em Inglês | MEDLINE | ID: mdl-19815517

RESUMO

DNA hybridization plays a central role in biology and, increasingly, in materials science. Yet, there is no precedent for examining the pathways by which specific single-stranded DNA sequences interact to assemble into a double helix. A detailed model of DNA is adopted in this work to examine such pathways and to determine the role of sequence, if any, on DNA hybridization. Transition path sampling simulations reveal that DNA rehybridization is prompted by a distinct nucleation event involving molecular sites with approximately four bases pairing with partners slightly offset from those involved in ideal duplexation. Nucleation is promoted in regions with repetitive base pair sequence motifs, which yield multiple possibilities for finding complementary base partners. Repetitive sequences follow a nonspecific pathway to renaturation consistent with a molecular "slithering" mechanism, whereas random sequences favor a restrictive pathway involving the formation of key base pairs before renaturation fully ensues.


Assuntos
DNA/química , Oligonucleotídeos/química , Transição de Fase , Pareamento de Bases , Sequência de Bases , Conformação de Ácido Nucleico , Hibridização de Ácido Nucleico , Temperatura de Transição
17.
mSphere ; 7(4): e0029722, 2022 08 31.
Artigo em Inglês | MEDLINE | ID: mdl-35856690

RESUMO

By entering a reversible state of reduced metabolic activity, dormant microorganisms are able to tolerate suboptimal conditions that would otherwise reduce their fitness. Dormancy may also benefit bacteria by serving as a refuge from parasitic infections. Here, we focus on dormancy in the Bacillota, where endospore development is transcriptionally regulated by the expression of sigma factors. A disruption of this process could influence the survivorship or reproduction of phages that infect spore-forming hosts with implications for coevolutionary dynamics. We characterized the distribution of sigma factors in over 4,000 genomes of diverse phages capable of infecting hosts that span the bacterial domain. From this, we identified homologs of sporulation-specific sigma factors in phages that infect spore-forming hosts. Unlike sigma factors required for phage reproduction, we provide evidence that sporulation-like sigma factors are nonessential for lytic infection. However, when expressed in the spore-forming Bacillus subtilis, some of these phage-derived sigma factors can activate the bacterial sporulation gene network and lead to a reduction in spore yield. Our findings suggest that the acquisition of host-like transcriptional regulators may allow phages to manipulate a complex and ancient trait in one of the most abundant cell types on Earth. IMPORTANCE As obligate parasites, phages exert strong top-down pressure on host populations with eco-evolutionary implications for community dynamics and ecosystem functioning. The process of phage infection, however, is constrained by bottom-up processes that influence the energetic and nutritional status of susceptible hosts. Many phages have acquired auxiliary genes from bacteria, which can be used to exploit host metabolism with consequences for phage fitness. In this study, we demonstrate that phages infecting spore-forming bacteria carry homologs of sigma factors, which their hosts use to orchestrate gene expression during spore development. By tapping into regulatory gene networks, phages may manipulate the physiology and survival strategies of nongrowing bacteria in ways that influence host-parasite coevolution.


Assuntos
Bacteriófagos , Bacillus subtilis/genética , Bacteriófagos/genética , Ecossistema , Genes Bacterianos , Esporos Bacterianos
18.
Genes Immun ; 12(4): 263-9, 2011 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-21248775

RESUMO

MPYS, also known as STING and MITA, is an interferon (IFN)ß stimulator essential for host defense against RNA, DNA viruses and intracellular bacteria. MPYS also facilitates the adjuvant activity of DNA vaccines. Here, we report identification of a distinct human MPYS haplotype that contains three non-synonymous single nucleotide polymorphisms (SNPs), R71H-G230A-R293Q (thus, named the HAQ haplotype). We estimate, in two cohorts (1,074 individuals), that ∼3% of Americans are homozygous for this HAQ haplotype. HAQ MPYS exhibits a > 90% loss in the ability to stimulate IFNß production. Furthermore, fibroblasts and macrophage cells expressing HAQ are defective in Listeria monocytogenes infection-induced IFNß production. Lastly, we find that the loss of IFNß activity is due primarily to the R71H and R293Q SNPs in HAQ. We hypothesize that individuals carrying HAQ may exhibit heightened susceptibility to viral infection and respond poorly to DNA vaccines.


Assuntos
Proteínas de Membrana/genética , Proteínas de Membrana/imunologia , Polimorfismo de Nucleotídeo Único , Sequência de Aminoácidos , Animais , Estudos de Coortes , Feminino , Células HEK293 , Humanos , Interferon beta/biossíntese , Interferon beta/imunologia , Listeria monocytogenes/imunologia , Listeriose/genética , Listeriose/imunologia , Masculino , Proteínas de Membrana/química , Dados de Sequência Molecular , Linhagem , Alinhamento de Sequência
19.
Nat Med ; 1(12): 1284-90, 1995 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-7489410

RESUMO

Although it is presumed that the integration of HIV-1 into the genome of infected CD4+ T lymphocytes allows viral persistence, there has been little direct evidence that CD4+ T cells with integrated provirus function as a latent reservoir for HIV-1 in infected individuals. Using resting CD4+ T-cell populations of extremely high purity and a novel assay that selectively and unambiguously detects integrated HIV-1, we show that resting CD4+ T cells harbouring integrated provirus are present in some infected individuals. However, these cells do not accumulate within the circulating pool of resting CD4+ T cells in the early stages of HIV-1 infection and do not accumulate even after prolonged periods in long-term survivors of HIV-1 infection. These results suggest that because of viral cytopathic effects and/or host effector mechanisms, productively infected CD4+ T cells do not generally survive for long enough to revert to a resting memory state in vivo.


Assuntos
Linfócitos T CD4-Positivos/virologia , DNA Viral/análise , Infecções por HIV/virologia , HIV-1/genética , Provírus/genética , Sequência de Bases , Separação Celular , Primers do DNA , Infecções por HIV/sangue , HIV-1/isolamento & purificação , Humanos , Dados de Sequência Molecular , Reação em Cadeia da Polimerase , Integração Viral , Latência Viral
20.
Nat Med ; 4(3): 341-5, 1998 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-9500610

RESUMO

Evolutionary patterns of virus replication and distribution in lymphoid tissue during the early phases of HIV infection have not been delineated. Lymph node (LN) biopsies were excised from patients at different times after the estimated time of primary infection. Within 3 months of the acute viral syndrome, HIV was mostly present in individual virus-expressing cells in LNs; trapping of virions in the follicular dendritic cell (FDC) network was minimal or absent, but was the predominant form of HIV detected in LNs of subjects with chronic infection, either recent (4-20 months after primary infection) or long-term (>2-3 years after primary infection). Plasma viremia was significantly higher in patients during the first 3 months than in those recently infected; however, there were no significant differences in the number of virus-expressing cells per square millimeter of LN tissue in these two groups. Numbers of virus-expressing cells in lymphoid tissue were significantly lower in the subjects with long-term infection than in the other two groups. Therefore, during the transition from primary to chronic HIV infection, the level of HIV replication in lymphoid tissue remains elevated despite the fact that viremia is significantly downregulated. These findings have implications for therapeutic strategies in primary HIV infection and in recent seroconvertors.


Assuntos
Infecções por HIV/virologia , HIV/crescimento & desenvolvimento , Linfonodos/virologia , Doença Aguda , Biópsia , Doença Crônica , Células Dendríticas/virologia , Progressão da Doença , Infecções por HIV/terapia , Humanos , RNA Viral/sangue , Viremia , Replicação Viral
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