Detalhe da pesquisa
1.
ChannelsDB 2.0: a comprehensive database of protein tunnels and pores in AlphaFold era.
Nucleic Acids Res
; 52(D1): D413-D418, 2024 Jan 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-37956324
2.
Mol* Volumes and Segmentations: visualization and interpretation of cell imaging data alongside macromolecular structure data and biological annotations.
Nucleic Acids Res
; 51(W1): W326-W330, 2023 07 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-37194693
3.
PDBImages: a command-line tool for automated macromolecular structure visualization.
Bioinformatics
; 39(12)2023 12 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-38085238
4.
Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures.
Nucleic Acids Res
; 49(W1): W431-W437, 2021 07 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-33956157
5.
PDBe: improved findability of macromolecular structure data in the PDB.
Nucleic Acids Res
; 48(D1): D335-D343, 2020 01 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-31691821
6.
BinaryCIF and CIFTools-Lightweight, efficient and extensible macromolecular data management.
PLoS Comput Biol
; 16(10): e1008247, 2020 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-33075050
7.
ChannelsDB: database of biomacromolecular tunnels and pores.
Nucleic Acids Res
; 46(D1): D399-D405, 2018 01 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-29036719
8.
MOLEonline: a web-based tool for analyzing channels, tunnels and pores (2018 update).
Nucleic Acids Res
; 46(W1): W368-W373, 2018 07 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-29718451
9.
PDBe: towards reusable data delivery infrastructure at protein data bank in Europe.
Nucleic Acids Res
; 46(D1): D486-D492, 2018 01 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-29126160
10.
Rapidly Display Glycan Symbols in 3D Structures: 3D-SNFG in LiteMol.
J Proteome Res
; 18(2): 770-774, 2019 02 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-30179493
11.
PatternQuery: web application for fast detection of biomacromolecular structural patterns in the entire Protein Data Bank.
Nucleic Acids Res
; 43(W1): W383-8, 2015 Jul 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-26013810
12.
ValidatorDB: database of up-to-date validation results for ligands and non-standard residues from the Protein Data Bank.
Nucleic Acids Res
; 43(Database issue): D369-75, 2015 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-25392418
13.
MotiveValidator: interactive web-based validation of ligand and residue structure in biomolecular complexes.
Nucleic Acids Res
; 42(Web Server issue): W227-33, 2014 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-24848013
14.
The Eighth Central European Conference "Chemistry towards Biology": Snapshot.
Molecules
; 21(10)2016 Oct 17.
Artigo
em Inglês
| MEDLINE | ID: mdl-27763518
15.
LiteMol suite: interactive web-based visualization of large-scale macromolecular structure data.
Nat Methods
; 14(12): 1121-1122, 2017 11 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-29190272
16.
Anatomy of enzyme channels.
BMC Bioinformatics
; 15: 379, 2014 Nov 18.
Artigo
em Inglês
| MEDLINE | ID: mdl-25403510
17.
MOLEonline 2.0: interactive web-based analysis of biomacromolecular channels.
Nucleic Acids Res
; 40(Web Server issue): W222-7, 2012 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-22553366
18.
SiteBinder: an improved approach for comparing multiple protein structural motifs.
J Chem Inf Model
; 52(2): 343-59, 2012 Feb 27.
Artigo
em Inglês
| MEDLINE | ID: mdl-22296449
19.
PDBe and PDBe-KB: Providing high-quality, up-to-date and integrated resources of macromolecular structures to support basic and applied research and education.
Protein Sci
; 31(10): e4439, 2022 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-36173162
20.
Predicting pK(a) values of substituted phenols from atomic charges: comparison of different quantum mechanical methods and charge distribution schemes.
J Chem Inf Model
; 51(8): 1795-806, 2011 Aug 22.
Artigo
em Inglês
| MEDLINE | ID: mdl-21761919