Nickel Carbide Nanoparticle Catalyst for Selective Hydrogenation of Nitriles to Primary Amines.

Despite its unique physicochemical properties, the catalytic application of nickel carbide (Ni3 C) in organic synthesis is rare. In this study, we report well-defined nanocrystalline Ni3 C (nano-Ni3 C) as a highly active catalyst for the selective hydrogenation of nitriles to primary amines. The activity of the aluminum-oxide-supported nano-Ni3 C (nano-Ni3 C/Al2 O3 ) catalyst surpasses that of Ni nanoparticles. Various aromatic and aliphatic nitriles and dinitriles were successfully converted to the corresponding primary amines under mild conditions (1 bar H2 pressure). Furthermore, the nano-Ni3 C/Al2 O3 catalyst was reusable and applicable to gram-scale experiments. Density functional theory calculations suggest the formation of polar hydrogen species on the nano-Ni3 C surface, which were attributed to the high activity of nano-Ni3 C towards nitrile hydrogenation. This study demonstrates the utility of metal carbides as a new class of catalysts for liquid-phase organic reactions.

HTLV-1 bZIP factor impairs DNA mismatch repair system.

Adult T-cell leukemia (ATL) is a peripheral T-cell malignancy caused by human T-cell leukemia virus type 1 (HTLV-1). Microsatellite instability (MSI) has been observed in ATL cells. Although MSI results from impaired mismatch repair (MMR) pathway, no null mutations in the genes encoding MMR factors are detectable in ATL cells. Thus, it is unclear whether or not impairment of MMR causes the MSI in ATL cells. HTLV-1 bZIP factor (HBZ) protein interacts with numerous host transcription factors and significantly contributes to disease pathogenesis and progression. Here we investigated the effect of HBZ on MMR in normal cells. The ectopic expression of HBZ in MMR-proficient cells induced MSI, and also suppressed the expression of several MMR factors. We then hypothesized that the HBZ compromises MMR by interfering with a transcription factor, nuclear respiratory factor 1 (NRF-1), and identified the consensus NRF-1 binding site at the promoter of the gene encoding MutS homologue 2 (MSH2), an essential MMR factor. The luciferase reporter assay revealed that NRF-1 overexpression enhanced MSH2 promoter activity, while co-expression of HBZ reversed this enhancement. These results supported the idea that HBZ suppresses the transcription of MSH2 by inhibiting NRF-1. Our data demonstrate that HBZ causes impaired MMR, and may imply a novel oncogenesis driven by HTLV-1.

Mechanism of Reductive Fluorination by PTFE-Decomposition Fluorocarbon Gases for WO3.

Reductive fluorination, which entails the substitution of O2- from oxide compounds with F- from fluoropolymers, is considered a practical approach for preparing transition-metal oxyfluorides. However, the current understanding of the fundamental reaction paths remains limited due to the analytical complexities posed by high-temperature reactions in glassware. Therefore, to expand this knowledgebase, this study investigates the reaction mechanisms behind the reductive fluorination of WO3 using polytetrafluoroethylene (PTFE) in an Ni reactor. Here, we explore varied reaction conditions (temperature, duration, and F/W ratio) to suppress the formation of carbon byproducts, minimize the dissipation of fluorine-containing tungsten (VI) compounds, and achieve a high fluorine content. The gas-solid reaction paths are analyzed using infrared spectroscopy, which revealed tetrafluoroethylene (C2F4), hexafluoropropene (C3F6), and iso-octafluoroisobutene (i-C4F8) to be the reactive components in the PTFE-decomposition gas during the reactions with WO3 at 500 °C. CO2 and CO are further identified as gaseous byproducts of the reaction evincing that the reaction is prompted by difluorocarbene (:CF2) formed after the cleavage of C═C bonds in i-C4F8, C3F6, and C2F4 upon contact with the WO3 surface. The solid-solid reaction path is established through a reaction between WO3 and WO3-xFx where solid-state diffusion of O2- and F- is discerned at 500 °C.

Issues on DFT+U calculations of organic diradicals.

The diradical state is an important electronic state for understanding molecular functions and should be elucidated for the in silico design of functional molecules and their application to molecular devices. The density functional theory calculation with plane-wave basis and correction of the on-site Coulomb parameter U (DFT+U/plane-wave calculation) is a good candidate of high-throughput calculations of diradical-band interactions. However, it has not been investigated in detail to what extent the DFT+U/plane-wave calculation can be used to calculate organic diradicals with a high degree of accuracy. In the present study, using typical organic diradical molecules (bisphenalenyl molecules) as model systems, the discrepancy in the optimum U values between the two electronic states (open-shell singlet and triplet) that compose the diradical state is detected. The calculated results show that the reason for this U value discrepancy is the difference in electronic delocalisation due to π-conjugation between the open-shell singlet and triplet states, and that the effect of U discrepancy becomes large as diradical character decreases. This indicates that it is necessary to investigate the U value discrepancy with reference to the calculated results by more accurate methods or to experimental values when calculating organic diradicals with low diradical character. For this investigation, the local magnetic moments, unpaired beta electron numbers, and effective magnetic exchange integral values can be used as reference values. For the effective magnetic exchange integral values, the effects of U discrepancy are partially cancelled out. However, because the effects may not be completely offset, care should be taken when using the effective magnetic exchange integral value as a reference. Furthermore, a comparison of DFT+U and hybrid-DFT calculations shows that the DFT+U underestimates the HOMO-LUMO gap of bisphenalenyls, although a qualitative discussion of the gap is possible.

Model calculations for the prediction of the diradical character of physisorbed molecules: p-benzyne/MgO and p-benzyne/SrO.

The analysis of the diradical state of functional open-shell molecules is important for understanding their physical properties and chemical reactivity. The diradical character is an important factor in the functional elucidation and design of open-shell molecules. In recent years, attempts have been made to immobilise functional open-shell molecules on surfaces to form devices. However, the influence of surface interactions on the diradical state remains unclear. In this study, the physisorption structures of p-benzyne, which is a typical diradical molecule, on MgO(001) and SrO(001) surfaces are used as models to investigate how the diradical character is affected by physisorption. This is done using approximate spin-projected density functional theory calculations with dispersion correction and plane-wave basis (AP-DFT-D3/plane-wave calculations). The diradical character change (Δy) due to adsorption can be categorised into three factors, namely the change due to the distortion of the diradical molecule (Δydis), the interaction between neighbouring diradical molecules (Δycoh), and molecule-surface interactions (Δysurf). In all the calculated models, physisorption reduced the diradical character (Δy < 0), and the contribution of Δysurf was the largest among the three factors. The calculated results show that adsorption induces electron delocalisation to π-conjugated orbitals and intramolecular charge polarisation, both of which contribute to reducing the occupancy of singly occupied molecular orbitals. This indicates that the diradical character of p-benzyne is reduced by the stabilisation of the resonance structures. Furthermore, geometry optimisation of the surfaces shows that the chemical-soft surface (SrO) varies the diradical character more significantly than the chemical-hard surface (MgO). This study shows that the open-shell electronic state and stack structure of diradical molecules can be controlled through the analysis of the surface diradical state.

Elucidation of the mechanism of melamine adsorption on Pt(111) surface via density functional theory calculations.

The oxygen reduction reaction (ORR) activity of Pt catalysts in polymer electrolyte fuel cells (PEFCs) should be enhanced to reduce Pt usage. The adsorption of heteroaromatic ring compounds such as melamine on the Pt surface can enhance its catalytic activity. However, melamine adsorption on Pt and the consequent ORR enhancement mechanism remain unclear. In this study, we performed density functional theory calculations to determine the adsorption structures of melamine/Pt(111). Melamine was coordinated to Pt via two N lone pairs on NH2 and N- in the triazine ring, resulting in a chemisorption structure with slight electron transfer. Four types of adsorption structures were identified: three-point adsorption (two amino groups and a triazine ring: Type A), two-point adsorption (one amino group and a triazine ring: Type B), two-point adsorption (two amino groups: Type C), and one-point adsorption (one amino group: Type D). The most stable structure was Type B. However, multiple intermediate structures were formed owing to the conformational changes from the most stable to other stable adsorption structures. The resonance structures of the adsorbed melamine stabilise the adsorption, as increased resonance allows for more electron delocalisation. In addition, the lone-pair orbital of the amino group in the adsorbed melamine acquires the characteristics of an sp3 hybrid orbital, which prevents horizontal adsorption on the Pt surface. We believe that understanding these adsorption mechanisms will help in the molecular design of organic molecule-decorated Pt catalysts and will lead to the reduction of Pt usage in PEFCs.

Properties of spinel-type Ti-Li-M composite oxides (M = Li, Na, Cu, and Ag) predicted by density functional theory.

Spinel-type titanate is an important material already being used as a stable anode for Li-ion batteries. In addition, spinel titanate shows superconducting properties upon tuning the amount of Li+-doping; hence, research on magnetic and superconducting materials has been conducted. However, it is believed that only the tiny Li+ monocation can occupy the 8a sites due to its small voids and the charge valence with Ti cations. In recent years, new spinel-type titanium oxides have been discovered, in which 8a sites are occupied by Na+ or Ag+. Although the application of these new compounds to catalyst and electrode materials has been attempted, the effect of 8a site monocations on the physical properties of spinel-type titanium oxide is unclear. In this study, to systematise the effects of 8a-site monocations on the Ti-O framework, theoretical calculations based on density functional theory (DFT), such as GGA, GGA+U, and hybrid-DFT, were performed for the electronic structures and geometric stabilities of four spinel-titanium oxides: LTO (8a sites occupied by Li+), NTO (8a sites occupied by Na+), CTO (8a sites occupied by Cu+), and ATO (8a sites occupied by Ag+). Furthermore, to verify the effect of the partial substitution, Li+, Na+, Cu+, and Ag+ doping of LTO, NTO, CTO, and ATO was also investigated. Throughout these calculations, the performance of spinel-type titanates can be categorised by (1) the magnitude of O-displacement and (2) the orbital correlation between the Ti-O framework and the 8a site cations. By appropriately selecting cations, the spinel titanates can be applied to battery materials, catalysts, optical materials, photocatalysts, and precursors to these materials.

Stability of Zirconium-Substituted Face-Centered Cubic Yttrium Hydride.

The stability of a zirconium (Zr)-substituted face-centered cubic (FCC) yttrium (Y) hydride (Y1-xZrx hydride) phase was investigated experimentally and theoretically. Two possible sites for hydrogen atoms exist in the FCC structure, namely, T- and O-sites, where hydrogen is present at the center of the tetrahedron and the octahedron composed of Y and/or Zr metals. The P-C isotherms revealed that the hydrogen content per metal (H/M) with 33% Zr-substituted YH3-δ was 2.2-2.3, which was lower than the expected value calculated from the starting composition of YH3-33% ZrH2 (Y0.67Zr0.33H2.67, H/M = 2.67). Hydrogen at the O-site in Y1-xZrx hydride mainly reacted during hydrogen desorption/absorption. On the basis of theoretical analyses, the hydrogen atoms do not occupy the center of the octahedron, when at least two of the six vertices of the octahedron were composed of Zr. The O-sites, where more than two Zr atoms coordinate, nonlinearly increased with the Zr content, and when the Zr content was >50%, almost no hydrogen atoms occupy the O-sites. The theoretical discussion supported the experimental results, and the Zr substitution was confirmed to reduce the occupancy of H at the O-site in the FCC YH3 significantly.

Can we enhance diradical character using interaction with stoichiometric surfaces of ionic oxides? A theoretical investigation using chemical indices.

Chemical indices are effective tools for examining the functions and reactivities of stable radical species. In this study, we formulated an approximation to estimate chemical indices using electron density. Theoretical investigations using the developed scheme revealed that surface interactions can tune chemical indices and that the diradical character was enhanced by weak adsorption onto ionic solids with charge-dipole interactions.

Theoretical study of correlations between the coordination structures and catalytic activities in polymer-stabilized au nanocluster catalysts.

Au nanoclusters (Au NCs) stabilized by poly(N-vinyl-2-pyrrolidone) and poly(allylamine), abbreviated to Au:PVP and Au:PAA, catalyze the aerobic oxidation of p-hydroxybenzyl alcohols, but the catalytic activity of Au:PVP is much higher than that of Au:PAA. To elucidate the correlations between the catalytic activities and coordination structures of the stabilizing polymer, the substrate accessibility on Au NCs was estimated by density functional theory (DFT) and molecular dynamics (MD) calculations. For MD simulations, we applied a systematic method to optimize the temperature parameters in temperature replica exchange molecular dynamics (T-REMD), and the coordination structures were comprehensively classified by multivariate analysis. The results show that the number of open active sites on the Au NCs is a good index for predicting the catalytic activities. © 2018 Wiley Periodicals, Inc.

Monte-Carlo simulation combined with density functional theory to investigate the equilibrium thermodynamics of electrode materials: lithium titanates as model compounds.

By using lithium titanate (LTO) as a model electrode material, the present study proposes a method to describe its equilibrium thermodynamics based on the Monte-Carlo simulation (MC), for which the energetic parameters are determined by the density functional theory (DFT). The electrochemical potential profile is simulated by a simple topological model which consists only of three parameters representing the Li site energies; namely, the potential energy of the 8a site (ε8a), the difference in the site energy between the 8a and 16c sites (Δε) and the repulsion between two Li atoms situated at the adjacent 8a and 16c sites (J). Parameter physics by the MC revealed that the term Δε plays a decisive role, with a collateral effect from J, for characterizing the shape of the potential profile whereas the term ε8a determines its position along the electrochemical potential. For instance, if Δε exceeds the thermal energy at the temperature under consideration, i.e., if Δε > 3kT, the first-order phase transition takes place during which two phases coexist, resulting in a plateau region in the potential profile. On the other hand, if Δε < 3kT, the lithiation of LTO is viewed as a phenomenon above the critical point, above which the material is in a homogeneous uniphasic state. A multiple regression analysis of a set of the total energy calculated by DFT allows us to determine these energetic terms. The MC simulation with the determined parameters well reproduces the shape and position of the experimental potential profile of LTO. Since the determined value, Δε/eV ∼ 0.4, far exceeds the thermal energy at ambient temperature, the potential plateau of LTO is explained by the first-order phase transition as long as the equilibrium state is concerned.

Extent of Spin Contamination Errors in DFT/Plane-wave Calculation of Surfaces: A Case of Au Atom Aggregation on a MgO Surface.

The aggregation of Au atoms onto a Au dimer (Au2) on a MgO (001) surface was calculated by restricted (spin-un-polarized) and unrestricted (spin-polarized) density functional theory calculations with a plane-wave basis and the approximate spin projection (AP) method. The unrestricted calculations included spin contamination errors of 0.0⁻0.1 eV, and the errors were removed using the AP method. The potential energy curves for the aggregation reaction estimated by the restricted and unrestricted calculations were different owing to the estimation of the open-shell structure by the unrestricted calculations. These results show the importance of the open-shell structure and correction of the spin contamination error for the calculation of small-cluster-aggregations and molecule dimerization on surfaces.

Dual inhibition of the mTORC1 and mTORC2 signaling pathways is a promising therapeutic target for adult T-cell leukemia.

Adult T-cell leukemia (ATL) has a poor prognosis as a result of severe immunosuppression and rapid tumor progression with resistance to conventional chemotherapy. Recent integrated-genome analysis has revealed mutations in many genes involved in the T-cell signaling pathway, suggesting that the aberration of this pathway is an important factor in ATL pathogenesis and ATL-cell proliferation. We screened a siRNA library to examine signaling-pathway functionality and found that the PI3K/Akt/mTOR pathway is critical to ATL-cell proliferation. We therefore investigated the effect of mammalian target of rapamycin (mTOR) inhibitors, including the dual inhibitors PP242 and AZD8055 and the mTORC1 inhibitors rapamycin and everolimus, on human T-cell leukemia virus type 1 (HTLV-1)-infected-cell and ATL-cell lines. Both dual inhibitors inhibited the proliferation of all tested cell lines by inducing G1-phase cell-cycle arrest and subsequent cell apoptosis, whereas the effects of the 2 mTORC1 inhibitors were limited, as they did not induce cell apoptosis. In the ATL-cell lines and in the primary ATL samples, both dual inhibitors inhibited phosphorylation of AKT at serine-473, a target of mTORC2, as well as that of S6K, whereas the mTORC1 inhibitors only inhibited mTORC1. Furthermore, AZD8055 more significantly inhibited the in vivo growth of the ATL-cell xenografts than did everolimus. These results indicate that the PI3K/mTOR pathway is critical to ATL-cell proliferation and might thus be a new therapeutic target in ATL.

Theoretical investigation on the interaction between RhIII octaethylporphyrin and a graphite basal surface: a comparison study of DFT, DFT-D, and AFM.

Using density functional theory based calculations and atomic-force-microscopy observations, we investigated the interaction between [RhIII(OEP)(Cl)] (OEP = octaethylporphyrin) and a graphite basal surface, and the electronic structure of [RhIII(OEP)(Cl)]/graphite. The [RhIII(OEP)(Cl)] complex has an electronic structure effective for CO activation, possessing a closed singlet structure as its ground state; hence, both σ-donation from the CO molecule (anode-reaction reactant) to RhIII, and π-back-donation from RhIII to CO, occur, because the [RhIII(OEP)(Cl)] complex does not have a singlet occupied molecular orbital on the porphyrin ring, the π-π stacking interaction between porphyrin and graphite is not present and their interaction is dominated by dispersion forces. The [RhIII(OEP)(Cl)] complex easily diffused on the graphite basal surface, and an aggregated structure of [RhIII(OEP)(Cl)] was observed by atomic force microscopy. The difference of the electronic structures of [RhIII(OEP)(Cl)] before and after its adsorption is very small, the dispersion force being the dominant force for the adsorption. However, the lowest unoccupied molecular orbital of [RhIII(OEP)(Cl)]/graphite is a σ bonding orbital between RhIII and graphite that will cause fast electron transfer from [RhIII(OEP)(Cl)] to graphite during the CO electro-oxidation; this would be a reason why the carbon-supported [RhIII(OEP)(Cl)] has high catalytic activity for CO electro-oxidation.

[Autologous peripheral blood stem cell transplantation for treating primary central nervous system lymphoma: a single-center retrospective study].

Primary central nervous system lymphoma (PCNSL) is more difficult to treat than other lymphomas. Recently, it has been suggested that high-dose chemotherapy followed by autologous stem cell transplantation (ASCT) is effective for treating PCNSL. In the present study, we retrospectively analyzed 12 patients with PCNSL at our hospital. Five young patients with good performance status (PS) received upfront ASCT. The conditioning regimen prior to ASCT with busulfan ＋ cyclophosphamide ＋ etoposide showed good prognosis (complete remission rate of 100%). In addition, the PS improved in patients treated with high-dose chemotherapy followed by ASCT, while it worsened in those treated without ASCT. Further investigations are needed to clarify inclusion/exclusion criteria and optimize conditioning regimens for ASCT.

Hyperfine interaction constants of 14NO2 in 14 500-16 800 cm-1 energy region.

We observed hyperfine-resolved high-resolution fluorescence excitation spectra of k = 0, N = 1 ← 0 transitions in 82 vibronic bands of the Ã2B2 ← X̃2A1 system of 14NO2 in the 14 500-16 800 cm-1 region by crossing a jet-cooled molecular beam and a single-mode dye laser beam at right angles. We determined hyperfine interaction constants of the lower and upper states for all the observed vibronic bands based on the analysis of the hyperfine structures of k = 0, N = 1 ← 0 transitions. Most of the determined Fermi contact interaction constants were found to be distributed in 0.0013-0.0038 cm-1, which are intermediate in magnitude between those in lower and higher energy region reported by other groups. A sharp decreasing of the Fermi contact interaction constant was found in 16 200-16 600 cm-1, and it may be caused by the interaction with the dark C̃2A2 state. The hyperfine interaction constants are powerful clues to obtain reliable vibronic assignment. We tentatively assigned vibronic bands located at 14 836 cm-1, 15 586 cm-1, and 16 322 cm-1 as the transitions to the intrinsic (0,7,0), (0,8,0), and (0,9,0) vibrational levels of the Ã2B2 state, respectively.

CTIA-4 blockade therapy; biology and clinical activity.

Cytotoxic T lymphocyte antigen-4 (CTLA-4) is a key inhibitory regulator for priming phase in T cell adaptive immunity against cancer. CTLA-4 blockade monotherapy or combination therapy with PD-1 blockade induces T cell activation and shows clinical activity in melanoma patients. Anti-CTLA-4 antibody is the first drug for immune checkpoint blockade and has been clinically used over the past decades. Several clinical characteristics and biomarkers in cancer immunotherapy were identified during developing CTLA-4 blockade therapy for mela- noma patients. Further roles of CTLA-4 blockade in other cancers are still to be determined. Well-designed clinical trial considering immune biology and findings from translational re- search is warranted to emerge potential efficacy of CTLA-4 blockade in cancer treatment.

Prognostic significance of HLA class I and II expression in patients with diffuse large B cell lymphoma treated with standard chemoimmunotherapy.

Loss of tumor cell human leukocyte antigen (HLA) is an immune escape mechanism for malignancies. However, the effect of low HLA class I or class II expression in diffuse large B cell lymphoma (DLBCL) treated with chemoimmunotherapy with the monoclonal antibody rituximab is largely unknown. We retrospectively analyzed samples and other data from 144 patients with DLBCL who were newly diagnosed in our institution and treated with standard R-CHOP therapy. We used antibodies against pan-HLA class I and pan-HLA class II molecules to assess HLA expression and its effect on prognosis. In a multivariate analysis, loss of HLA class II expression was a significantly independent adverse factor for progression-free survival (PFS; hazard ratio 2.3; 95 % confidence interval 1.2-4.6; P = 0.01). Although HLA class I loss of expression did not correlate with prognosis, the combination of HLA class I(+) with either low peripheral lymphocyte count or CD3(+) lymphocyte count was an adverse prognostic factor for PFS. Loss of HLA class II is an International Prognostic Index (IPI)-independent adverse factor for PFS in patients with DLBCL treated with standard therapy. However, in contrast to other solid cancers, HLA class I loss was not solely a prognostic factor in DLBCL.

Rapidly progressive autoimmune pancytopenia successfully treated with steroids.

A 73-year-old woman was admitted to our hospital because of pancytopenia. Bone marrow aspiration showed increased cellularity with no dysplastic change. Laboratory tests revealed increased reticulated erythrocytes and reticulated platelets, positive direct Coombs test, and hemolysis. These findings led to the diagnosis of Evans syndrome. Relatively decreased mature neutrophils in the bone marrow aspirate raised the possibility of autoimmune neutropenia. Antineutrophil antibody was detected by the 6 cell-lineage immunofluorescence test, consistent with the diagnosis of autoimmune neutropenia. The patient had no underlying diseases, and was therefore considered to have idiopathic autoimmune pancytopenia. Due to rapid progression of the disease, prednisolone was administered at an initial dose of 0.5 mg/kg per day and the pancytopenia improved promptly.

Donor lymphocytes expressing the herpes simplex virus thymidine kinase suicide gene: detailed immunological function following add-back after haplo-identical transplantation.

BACKGROUND AIMS: Haplo-identical hematopoietic stem cell transplantation (HSCT) with add-back of donor lymphocytes expressing the herpes simplex virus thymidine kinase suicide gene (TK cells) is one of the most widely applied promising new gene therapy approaches. However, the immunological status of added-back TK cells after HSCT has yet to be well characterized. METHODS: We investigated TK cells through the use of flow cytometry, T-cell receptor (TCR) Vß repertoire spectratyping and linear amplification-mediated polymerase chain reaction followed by insertion site analysis in a patient enrolled in our clinical trial. RESULTS: A comparison of onset with remission of acute graft-versus-host disease confirmed that TK cells were predominantly eliminated and that proliferative CD8(+) non-TK cells were also depleted in response to ganciclovir administration. The TCR Vß-chain repertoire of both TK cells and non-TK cells markedly changed after administration of ganciclovir, and, whereas the TCR repertoire of non-TK cells returned to a normal spectratype long after transplantation, that of TK cells remained skewed. With the long-term prophylactic administration of acyclovir, TK cells oligoclonally expanded and the frequency of spliced variants of TK cells increased. Known cancer-associated genes were not evident near the oligoclonally expanded herpes simplex virus (HSV)-TK insertion sites. CONCLUSIONS: We demonstrate obvious differences in immunological status between TK cells and non-TK cells. In addition, we speculate that long-term prophylactic administration of acyclovir increases the risk of oligoclonal expansion of spliced forms of TK cells.