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Immunol Res ; 63(1-3): 90-100, 2015 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-26318878

RESUMO

Chronic lymphocytic leukemia (CLL) is a clonal disease of B lymphocytes manifesting as an absolute lymphocytosis in the blood. However, not all lymphocytoses are leukemic. In addition, first-degree relatives of CLL patients have an ~15 % chance of developing a precursor condition to CLL termed monoclonal B cell lymphocytosis (MBL), and distinguishing CLL and MBL B lymphocytes from normal B cell expansions can be a challenge. Therefore, we selected FMOD, CKAP4, PIK3C2B, LEF1, PFTK1, BCL-2, and GPM6a from a set of genes significantly differentially expressed in microarray analyses that compared CLL cells with normal B lymphocytes and used these to determine whether we could discriminate CLL and MBL cells from B cells of healthy controls. Analysis with receiver operating characteristics and Bayesian relevance determination demonstrated good concordance with all panel genes. Using a random forest classifier, the seven-gene panel reliably distinguished normal polyclonal B cell populations from expression patterns occurring in pre-CLL and CLL B cell populations with an error rate of 2 %. Using Bayesian learning, the expression levels of only two genes, FMOD and PIK3C2B, correctly distinguished 100 % of CLL and MBL cases from normal polyclonal and mono/oligoclonal B lymphocytes. Thus, this study sets forth effective computational approaches that distinguish MBL/CLL from normal B lymphocytes. The findings also support the concept that MBL is a CLL precursor.


Assuntos
Linfócitos B/fisiologia , Classe II de Fosfatidilinositol 3-Quinases/metabolismo , Proteínas da Matriz Extracelular/metabolismo , Leucemia Linfocítica Crônica de Células B/diagnóstico , Linfocitose/diagnóstico , Lesões Pré-Cancerosas/diagnóstico , Valor Preditivo dos Testes , Proteoglicanas/metabolismo , Linhagem Celular Tumoral , Proliferação de Células/genética , Classe II de Fosfatidilinositol 3-Quinases/genética , Biologia Computacional , Diagnóstico Diferencial , Proteínas da Matriz Extracelular/genética , Fibromodulina , Regulação Neoplásica da Expressão Gênica , Humanos , Leucemia Linfocítica Crônica de Células B/genética , Ativação Linfocitária/genética , Linfocitose/genética , Análise em Microsséries , Lesões Pré-Cancerosas/genética , Prognóstico , Proteoglicanas/genética , Transcriptoma
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