Pesquisa | Portal de Pesquisa da BVS

1.

Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR.

Olson, Robert D; Assaf, Rida; Brettin, Thomas; Conrad, Neal; Cucinell, Clark; Davis, James J; Dempsey, Donald M; Dickerman, Allan; Dietrich, Emily M; Kenyon, Ronald W; Kuscuoglu, Mehmet; Lefkowitz, Elliot J; Lu, Jian; Machi, Dustin; Macken, Catherine; Mao, Chunhong; Niewiadomska, Anna; Nguyen, Marcus; Olsen, Gary J; Overbeek, Jamie C; Parrello, Bruce; Parrello, Victoria; Porter, Jacob S; Pusch, Gordon D; Shukla, Maulik; Singh, Indresh; Stewart, Lucy; Tan, Gene; Thomas, Chris; VanOeffelen, Margo; Vonstein, Veronika; Wallace, Zachary S; Warren, Andrew S; Wattam, Alice R; Xia, Fangfang; Yoo, Hyunseung; Zhang, Yun; Zmasek, Christian M; Scheuermann, Richard H; Stevens, Rick L.

Nucleic Acids Res ; 51(D1): D678-D689, 2023 01 06.

Artigo em Inglês | MEDLINE | ID: mdl-36350631

2.

Modified Harborview Risk Score accurately predicts mortality for patients with ruptured abdominal aortic aneurysm.

Warren, Andrew S; Dansey, Kirsten; Starnes, Benjamin W; Hemingway, Jake; Quiroga, Elina; Singh, Niten; Tran, Nam; Zettervall, Sara L.

J Vasc Surg ; 79(3): 555-561, 2024 Mar.

Artigo em Inglês | MEDLINE | ID: mdl-37967587

3.

Early outcomes of endovascular repairs of the aortic arch using thoracic branch endoprosthesis.

Pang, Haley J; Warren, Andrew S; Dansey, Kirsten D; Burke, Christopher; DeRoo, Scott; Sweet, Matthew P; Smith, Matthew; Zettervall, Sara L.

J Vasc Surg ; 2024 Feb 11.

Artigo em Inglês | MEDLINE | ID: mdl-38350554

4.

A genomic data resource for predicting antimicrobial resistance from laboratory-derived antimicrobial susceptibility phenotypes.

VanOeffelen, Margo; Nguyen, Marcus; Aytan-Aktug, Derya; Brettin, Thomas; Dietrich, Emily M; Kenyon, Ronald W; Machi, Dustin; Mao, Chunhong; Olson, Robert; Pusch, Gordon D; Shukla, Maulik; Stevens, Rick; Vonstein, Veronika; Warren, Andrew S; Wattam, Alice R; Yoo, Hyunseung; Davis, James J.

Brief Bioinform ; 22(6)2021 11 05.

Artigo em Inglês | MEDLINE | ID: mdl-34379107

5.

Association of Pre and Perioperative Vein Mapping with Hemodialysis Access Characteristics and Outcomes.

Wolf, Hannah; Hillenbrand, Charles J; Warren, Andrew S; Tang, Gale L.

Ann Vasc Surg ; 95: 188-196, 2023 Sep.

Artigo em Inglês | MEDLINE | ID: mdl-37247835

6.

The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.

Davis, James J; Wattam, Alice R; Aziz, Ramy K; Brettin, Thomas; Butler, Ralph; Butler, Rory M; Chlenski, Philippe; Conrad, Neal; Dickerman, Allan; Dietrich, Emily M; Gabbard, Joseph L; Gerdes, Svetlana; Guard, Andrew; Kenyon, Ronald W; Machi, Dustin; Mao, Chunhong; Murphy-Olson, Dan; Nguyen, Marcus; Nordberg, Eric K; Olsen, Gary J; Olson, Robert D; Overbeek, Jamie C; Overbeek, Ross; Parrello, Bruce; Pusch, Gordon D; Shukla, Maulik; Thomas, Chris; VanOeffelen, Margo; Vonstein, Veronika; Warren, Andrew S; Xia, Fangfang; Xie, Dawen; Yoo, Hyunseung; Stevens, Rick.

Nucleic Acids Res ; 48(D1): D606-D612, 2020 01 08.

Artigo em Inglês | MEDLINE | ID: mdl-31667520

7.

PATRIC as a unique resource for studying antimicrobial resistance.

Antonopoulos, Dionysios A; Assaf, Rida; Aziz, Ramy Karam; Brettin, Thomas; Bun, Christopher; Conrad, Neal; Davis, James J; Dietrich, Emily M; Disz, Terry; Gerdes, Svetlana; Kenyon, Ronald W; Machi, Dustin; Mao, Chunhong; Murphy-Olson, Daniel E; Nordberg, Eric K; Olsen, Gary J; Olson, Robert; Overbeek, Ross; Parrello, Bruce; Pusch, Gordon D; Santerre, John; Shukla, Maulik; Stevens, Rick L; VanOeffelen, Margo; Vonstein, Veronika; Warren, Andrew S; Wattam, Alice R; Xia, Fangfang; Yoo, Hyunseung.

Brief Bioinform ; 20(4): 1094-1102, 2019 07 19.

Artigo em Inglês | MEDLINE | ID: mdl-28968762

8.

Reply.

Warren, Andrew S; Zettervall, Sara L.

J Vasc Surg ; 79(4): 987-988, 2024 Apr.

Artigo em Inglês | MEDLINE | ID: mdl-38519223

9.

RNA-Rocket: an RNA-Seq analysis resource for infectious disease research.

Warren, Andrew S; Aurrecoechea, Cristina; Brunk, Brian; Desai, Prerak; Emrich, Scott; Giraldo-Calderón, Gloria I; Harb, Omar; Hix, Deborah; Lawson, Daniel; Machi, Dustin; Mao, Chunhong; McClelland, Michael; Nordberg, Eric; Shukla, Maulik; Vosshall, Leslie B; Wattam, Alice R; Will, Rebecca; Yoo, Hyun Seung; Sobral, Bruno.

Bioinformatics ; 31(9): 1496-8, 2015 May 01.

Artigo em Inglês | MEDLINE | ID: mdl-25573919

10.

Minimizing delays to hemodialysis access maturation: A quality improvement analysis.

Warren, Andrew S; Wolf, Hannah; Hillenbrand, Charles J; Tang, Gale L.

J Vasc Access ; : 11297298241244509, 2024 Apr 11.

Artigo em Inglês | MEDLINE | ID: mdl-38602233

11.

Missing genes in the annotation of prokaryotic genomes.

Warren, Andrew S; Archuleta, Jeremy; Feng, Wu-Chun; Setubal, João Carlos.

BMC Bioinformatics ; 11: 131, 2010 Mar 15.

Artigo em Inglês | MEDLINE | ID: mdl-20230630

12.

Functional bias in molecular evolution rate of Arabidopsis thaliana.

Warren, Andrew S; Anandakrishnan, Ramu; Zhang, Liqing.

BMC Evol Biol ; 10: 125, 2010 May 01.

Artigo em Inglês | MEDLINE | ID: mdl-20433764

13.

The Genome Reverse Compiler: an explorative annotation tool.

Warren, Andrew S; Setubal, João Carlos.

BMC Bioinformatics ; 10: 35, 2009 Jan 27.

Artigo em Inglês | MEDLINE | ID: mdl-19173744

14.

Thermodynamic analysis of additivity between the heavy and light chains in affinity maturation of an antibody.

Kang, Jonghoon; Warren, Andrew S.

Mol Immunol ; 45(1): 304-5, 2008 Jan.

Artigo em Inglês | MEDLINE | ID: mdl-17707510

15.

Enthalpy-entropy compensation in the transition of a monospecific antibody towards antigen-binding promiscuity.

Kang, Jonghoon; Warren, Andrew S.

Mol Immunol ; 44(14): 3623-4, 2007 Jul.

Artigo em Inglês | MEDLINE | ID: mdl-17462737

16.

Whole Exome Sequencing to Identify Genetic Variants Associated with Raised Atherosclerotic Lesions in Young Persons.

Hixson, James E; Jun, Goo; Shimmin, Lawrence C; Wang, Yizhi; Yu, Guoqiang; Mao, Chunhong; Warren, Andrew S; Howard, Timothy D; Heide, Richard S Vander; Van Eyk, Jennifer; Wang, Yue; Herrington, David M.

Sci Rep ; 7(1): 4091, 2017 06 22.

Artigo em Inglês | MEDLINE | ID: mdl-28642624

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