Quantification of the π-π interactions that govern tertiary structure in donor-acceptor [2]pseudorotaxanes.

Flexibility in pseudorotaxanes and interlocked molecules that rely on interactions between π-donor-acceptor subunits provides access to folded structures reminiscent of the tertiary structure of proteins. While they have been described before, only now have we been able to quantify one such tertiary structure by making use of pseudorotaxanes designed for the purpose. Here, the enhanced stability of a pseudorotaxane inside a folded structure is measured to be ΔG = ca. 0.5 kcal mol(-1). The tertiary structure is stabilized by a charge-transfer interaction between a tetrathiafulvalene-based π-donor that can situate alongside a π-accepting paraquat-based macrocycle by folding of a flexible linker. At room temperature, it was estimated that 70% of the pseudorotaxanes examined here exist in their folded state. This quantitative information is critical for the creation of interlocked molecular machines that have predictable energetics and structures and for revealing a complexity approaching biological molecules.

Molecular logic gates using surface-enhanced Raman-scattered light.

A voltage-activated molecular-plasmonics device was created to demonstrate molecular logic based on resonant surface-enhanced Raman scattering (SERS). SERS output was achieved by a combination of chromophore-plasmon coupling and surface adsorption at the interface between a solution and a gold nanodisc array. The chromophore was created by the self-assembly of a supramolecular complex with a redox-active guest molecule. The guest was reversibly oxidized at the gold surface to the +1 and +2 oxidation states, revealing spectra that were reproduced by calculations. State-specific SERS features enabled the demonstration of a multigate logic device with electronic input and optical output.

Turning on resonant SERRS using the chromophore-plasmon coupling created by host-guest complexation at a plasmonic nanoarray.

An active molecular plasmonics system is demonstrated where a supramolecular chromophore generated in a host-guest binding event couples with the localized surface plasmon resonance (LSPR) arising from gold nanodisc gratings. This coupling was achieved by wavelength-matching the chromophore and the LSPR with the laser excitation, thus giving rise to surface-enhanced resonance Raman scattering (SERRS). The chromophore is a broad charge-transfer (CT) band centered at 865 nm (epsilon = 3500 M(-1) cm(-1)) generated by the complexation of cyclobis(paraquat-p-phenylene) (CBPQT(4+)) and the guest molecule tetrathiafulvalene (TTF). The substrates consist of sub-1-microm gold nanodisc arrays which display dimension-tunable plasmon wavelengths (600-1000 nm). The vibrational spectra of the complex arising from SERRS (lambda(exc) = 785 nm) were generated by irradiating an array (lambda(LSPR) = 765 nm) through the solution to give a chromophore-specific signature with the intensities surface enhanced by approximately 10(5). Surface adsorption of the empty and complexed CBPQT(4+) is also implicated in bringing the chromophore into the electric field arising from the surface-localized plasmon. In a titration experiment, the SERRS effect was then used to verify the role of resonance in turning on the spectrum and to accurately quantify the binding between surface-adsorbed CBPQT(4+) and TTF. The use of a nonpatterned gold substrate as well as a color mismatched complex did not show the enhancement, thus validating that spectral overlap between the chromophore and plasmon resonance is key for resonance surface enhancement. Simulations of the electric fields of the arrays are consistent with interdisc plasmon coupling and the observed enhancement factors. The creation of a responsive plasmonic device upon the addition of the guest molecule and the subsequent coupling of the CT chromophore to the plasmon presents favorable opportunities for applications in molecular sensing and active molecular plasmonics.

Reduction of a redox-active ligand drives switching in a Cu(I) pseudorotaxane by a bimolecular mechanism.

The reduction of a redox-active ligand is shown to drive reversible switching of a Cu(I) [2]pseudorotaxane ([2]PR(+)) into the reduced [3]pseudorotaxane ([3]PR(+)) by a bimolecular mechanism. The unreduced pseudorotaxanes [2]PR(+) and [3]PR(2+) are initially self-assembled from the binucleating ligand, 3,6-bis(5-methyl-2-pyridine)-1,2,4,5-tetrazine (Me(2)BPTZ), and a preformed copper-macrocycle moiety (Cu-M(+)) based on 1,10-phenanthroline. X-ray crystallography revealed a syn geometry of the [3]PR(2+). The UV-vis-NIR spectra show low-energy metal-to-ligand charge-transfer transitions that red shift from 808 nm for [2]PR(+) to 1088 nm for [3]PR(2+). Quantitative analysis of the UV-vis-NIR titration shows the stepwise formation constants to be K(1) = 8.9 x 10(8) M(-1) and K(2) = 3.1 x 10(6) M(-1), indicative of negative cooperativity. The cyclic voltammetry (CV) and coulometry of Me(2)BPTZ, [2]PR(+), and [3]PR(2+) shows the one-electron reductions at E(1/2) = -0.96, -0.65, and -0.285 V, respectively, to be stabilized in a stepwise manner by each Cu(+) ion. CVs of [2]PR(+) show changes with scan rate consistent with an EC mechanism of supramolecular disproportionation after reduction: [2]PR(0) + [2]PR(+) = [3]PR(+) + Me(2)BPTZ(0) (K(D)*, k(d)). UV-vis-NIR spectroelectrochemistry was used to confirm the 1:1 product stoichiometry for [3]PR(+):Me(2)BPTZ. The driving force (DeltaG(D)* = -5.1 kcal mol(-1)) for the reaction is based on the enhanced stability of the reduced [3]PR(+) over reduced [2]PR(0) by 365 mV (8.4 kcal mol(-1)). Digital simulations of the CVs are consistent with a bimolecular pathway (k(d) = 12 000 s(-1) M(-1)). Confirmation of the mechanism provides a basis to extend this new switching modality to molecular machines.

Determination of binding strengths of a host-guest complex using resonance Raman scattering.

The detection of analyte-binding events by receptors is drawing together the fields of Raman spectroscopy and supramolecular chemistry. This study is intended to facilitate this cohering by examining a model in the solution phase. The resonance Raman scattering (RRS) spectra of the complexation between tetrathiafulvalene (TTF) and cyclobis(paraquat-p-phenylene) (CBPQT(4+)) has been used as the model system to characterize the binding event of a host-guest system. RRS spectra are generated by excitation (lambda(exc) = 785 nm) within the lowest-energy charge-transfer (CT) transition (lambda(max) = 865 nm) of the TTF subsetCBPQT(4+) complex. The paired binding curves from the RRS and UV-vis-NIR titration data agrees with prior work, and a DeltaG of -5.7 +/- 0.6 kcal mol(-1) (MeCN, 298 K) was obtained for the complexation of TTF with CBPQT(4+). Computations on the complex and its components reproduce the energy shifts and resonance enhancements of the Raman band intensities, providing a basis to identify the structural and vibrational changes occurring upon complexation. The changes in bond lengths coincide with partial depopulation of a TTF-based HOMO and population of a CBPQT(4+)-based LUMO through CT mixing in the ground state of 0.46e(-). The structural changes upon complexation generally lead to lower wavenumber vibrations and to changes in the normal mode descriptions.

Enhanced detection of explosives by turn-on resonance Raman upon host-guest complexation in solution and the solid state.

The recognition of nitroaromatic explosives by a tetrakis-tetrathiafulvalene-calix[4]pyrrole receptor (TTF-C[4]P) yields a "turn on" and fingerprinting response in the resonance Raman scattering observed in solution and the solid state. Intensity changes in nitro vibrations with analyte complexation occur via a mechanism of resonance between the 785 nm laser line and the strongly absorbing charge-transfer chromophore arising from the complex between electron-donating TTF-C[4]P and electron-accepting nitroaromatic explosives. The addition of chloride forms the Cl-·TTF-C[4]P complex resetting the system for reuse.