Detalhe da pesquisa
1.
AmberTools.
J Chem Inf Model
; 63(20): 6183-6191, 2023 Oct 23.
Artigo
em Inglês
| MEDLINE | ID: mdl-37805934
2.
Membrane cholesterol dependence of cannabinoid modulation of glycine receptor.
FASEB J
; 34(8): 10920-10930, 2020 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-32608538
3.
Protonation state of the selectivity filter of bacterial voltage-gated sodium channels is modulated by ions.
Proteins
; 88(3): 527-539, 2020 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-31589792
4.
Reformulation of the self-guided molecular simulation method.
J Chem Phys
; 153(9): 094112, 2020 Sep 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-32891108
5.
The homogeneity condition: A simple way to derive isotropic periodic sum potentials for efficient calculation of long-range interactions in molecular simulation.
J Chem Phys
; 150(21): 214109, 2019 Jun 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-31176325
6.
The ubiquitin ligase Ubr4 controls stability of podocin/MEC-2 supercomplexes.
Hum Mol Genet
; 25(7): 1328-44, 2016 Apr 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-26792178
7.
Comparison of the umbrella sampling and the double decoupling method in binding free energy predictions for SAMPL6 octa-acid host-guest challenges.
J Comput Aided Mol Des
; 32(10): 1075-1086, 2018 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-30324304
8.
Self-guided Langevin dynamics via generalized Langevin equation.
J Comput Chem
; 37(6): 595-601, 2016 Mar 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-26183423
9.
A Virtual Mixture Approach to the Study of Multistate Equilibrium: Application to Constant pH Simulation in Explicit Water.
PLoS Comput Biol
; 11(10): e1004480, 2015 Oct.
Artigo
em Inglês
| MEDLINE | ID: mdl-26506245
10.
Isotropic periodic sum for multipole interactions and a vector relation for calculation of the Cartesian multipole tensor.
J Chem Phys
; 145(16): 164110, 2016 Oct 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-27802614
11.
Comparative phosphoproteomic analysis of mammalian glomeruli reveals conserved podocin C-terminal phosphorylation as a determinant of slit diaphragm complex architecture.
Proteomics
; 15(7): 1326-31, 2015 Apr.
Artigo
em Inglês
| MEDLINE | ID: mdl-25420462
12.
Lateral density of receptor arrays in the membrane plane influences sensitivity of the E. coli chemotaxis response.
EMBO J
; 30(9): 1719-29, 2011 May 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-21441899
13.
Phosphoproteomic analysis reveals regulatory mechanisms at the kidney filtration barrier.
J Am Soc Nephrol
; 25(7): 1509-22, 2014 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-24511133
14.
A common molecular basis for exogenous and endogenous cannabinoid potentiation of glycine receptors.
J Neurosci
; 32(15): 5200-8, 2012 Apr 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-22496565
15.
Targeted conformational search with map-restrained self-guided Langevin dynamics: application to flexible fitting into electron microscopic density maps.
J Struct Biol
; 183(3): 429-440, 2013 Sep.
Artigo
em Inglês
| MEDLINE | ID: mdl-23876978
16.
Weak intra-ring allosteric communications of the archaeal chaperonin thermosome revealed by normal mode analysis.
Biophys J
; 103(6): 1285-95, 2012 Sep 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-22995501
17.
Replica exchanging self-guided Langevin dynamics for efficient and accurate conformational sampling.
J Chem Phys
; 137(4): 044106, 2012 Jul 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-22852596
18.
Maintain rigid structures in Verlet based cartesian molecular dynamics simulations.
J Chem Phys
; 137(13): 134110, 2012 Oct 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-23039588
19.
Force-momentum-based self-guided Langevin dynamics: a rapid sampling method that approaches the canonical ensemble.
J Chem Phys
; 135(20): 204101, 2011 Nov 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-22128922
20.
Toward canonical ensemble distribution from self-guided Langevin dynamics simulation.
J Chem Phys
; 134(13): 134108, 2011 Apr 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-21476744