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1.
J Am Chem Soc ; 2024 Jul 09.
Artigo em Inglês | MEDLINE | ID: mdl-38980045

RESUMO

Olefin metathesis has become an efficient tool in synthetic organic chemistry to build carbon-carbon bonds, thanks to the development of Grubbs- and Schrock-type catalysts. Olefin coordination, a key and often rate-determining elementary step for d0 Schrock-type catalysts, has been rarely explored due to the lack of accessible relevant molecular analogues. Herein, we present a fully characterized surrogate of this key olefin-coordination intermediate, namely, a cationic d0 tungsten oxo-methylidene complex bearing two N-heterocyclic carbene ligands─[WO(CH2)Cl(IMes)2](OTf) (1) (IMes = 1,3-dimesitylimidazole-2-ylidene, OTf-triflate counteranion), resulting in a trigonal bipyramidal (TBP) geometry, along with its neutral octahedral analogue [WO(CH2)Cl2(IMes)2] (2)─and an isostructural oxo-methylidyne derivative [WO(CH)Cl(IMes)2] (3). The analysis of their solid-state 13C and 183W MAS NMR signatures, along with computed 17O NMR parameters, helps to correlate their electronic structures with NMR patterns and evidences the importance of the competition among the three equatorial ligands in the TBP complexes. Anchored on experimentally obtained NMR parameters for 1, computational analysis of a series of olefin coordination intermediates highlights the interplay between σ- and π-donating ligands in modulating their stability and further paralleling their reactivity. NMR spectroscopy descriptors reveal the origin for the advantage of the dissymmetry in σ-donating abilities of ancillary ligands in Schrock-type catalysts: weak σ-donors avoid the orbital-competition with the oxo ligand upon formation of a TBP olefin-coordination intermediate, while stronger σ-donors compromise M≡O triple bonding and thus render olefin coordination step energy demanding.

2.
Curr Issues Mol Biol ; 46(2): 1107-1120, 2024 Jan 25.
Artigo em Inglês | MEDLINE | ID: mdl-38392188

RESUMO

The OCT4 transcription factor is necessary to maintain cell stemness in the early stages of embryogenesis and is involved in the formation of induced pluripotent stem cells, but its role in oncogenesis is not yet entirely clear. In this work, OCT4 expression was investigated in malignant gliomas. Twenty glioma cell lines and a sample of normal adult brain tissue were used. OCT4 expression was found in all studied glioma cell lines but was not detected in normal adult brain tissue. For one of these lines, OCT4 knockdown caused tumor cell death. By varying the culture conditions of these cells, we unexpectedly found that OCT4 expression increased when cells were incubated in serum-free medium, and this effect was significantly enhanced in serum-free and L-glutamine-free medium. L-glutamine and the Krebs cycle, which is slowed down in serum-free medium according to our NMR data, are sources of α-KG. Thus, our data indicate that OCT4 expression in gliomas may be regulated by the α-KG-dependent metabolic reprogramming of cells.

3.
J Biol Chem ; 298(12): 102615, 2022 12.
Artigo em Inglês | MEDLINE | ID: mdl-36265580

RESUMO

Nicotinamide riboside (NR) is an effective precursor of nicotinamide adenine dinucleotide (NAD) in human and animal cells. NR supplementation can increase the level of NAD in various tissues and thereby improve physiological functions that are weakened or lost in experimental models of aging or various human pathologies. However, there are also reports questioning the efficacy of NR supplementation. Indeed, the mechanisms of its utilization by cells are not fully understood. Herein, we investigated the role of purine nucleoside phosphorylase (PNP) in NR metabolism in mammalian cells. Using both PNP overexpression and genetic knockout, we show that after being imported into cells by members of the equilibrative nucleoside transporter family, NR is predominantly metabolized by PNP, resulting in nicotinamide (Nam) accumulation. Intracellular cleavage of NR to Nam is prevented by the potent PNP inhibitor Immucillin H in various types of mammalian cells. In turn, suppression of PNP activity potentiates NAD synthesis from NR. Combining pharmacological inhibition of PNP with NR supplementation in mice, we demonstrate that the cleavage of the riboside to Nam is strongly diminished, maintaining high levels of NR in blood, kidney, and liver. Moreover, we show that PNP inhibition stimulates Nam mononucleotide and NAD+ synthesis from NR in vivo, in particular, in the kidney. Thus, we establish PNP as a major regulator of NR metabolism in mammals and provide evidence that the health benefits of NR supplementation could be greatly enhanced by concomitant downregulation of PNP activity.


Assuntos
NAD , Purina-Núcleosídeo Fosforilase , Humanos , Camundongos , Animais , NAD/metabolismo , Purina-Núcleosídeo Fosforilase/genética , Purina-Núcleosídeo Fosforilase/metabolismo , Niacinamida/farmacologia , Niacinamida/metabolismo , Compostos de Piridínio , Mamíferos/metabolismo
4.
J Am Chem Soc ; 145(47): 25595-25603, 2023 Nov 29.
Artigo em Inglês | MEDLINE | ID: mdl-37962437

RESUMO

Since its emergence over 50 years ago, the structure of surface sites in Ziegler-Natta catalysts, which are responsible for a major fraction of the world's supply of polyethylene (PE) and polypropylene (PP), has remained elusive. This is in part due to the complexity of these systems that involve multiple synthetic steps and components, namely, the MgCl2 support, a transition-metal chloride, and several organic modifiers, known as donors, that are used prior and in some instances during the activation step with alkyl aluminum. Due to the favorable nuclear magnetic resonance (NMR) properties of V and its use in Ziegler-Natta catalysts, we utilize 51V solid-state NMR spectroscopy to investigate the structure of VOCl3 on MgCl2(thf)1.5. The resulting catalyst shows ethylene polymerization activity similar to that of its Ti analogues. Using carefully benchmarked density functional theory (DFT) calculations, the experimental 51V NMR signature was analyzed to elucidate the structure of the surface sites. Using this approach, we demonstrate that the 51V NMR signature contains information about the coordination environment, i.e., the type of ancillary ligand, and the morphology of the MgCl2 support. Analysis of the NMR signature shows that the adsorption of VOCl3 on MgCl2(thf)1.5 generates a well-defined hexacoordinated V-oxo species containing one alkoxy and four chloride ligands, whose local geometry results from the interaction with an amorphous MgCl2 surface. This study illustrates how NMR spectroscopy, which is highly sensitive to the local environment of the investigated nuclei, here V, enables us to identify the exact coordination sphere and to address the effect of the support morphology on surface site structures.

5.
J Am Chem Soc ; 145(28): 15018-15023, 2023 Jul 19.
Artigo em Inglês | MEDLINE | ID: mdl-37418311

RESUMO

Although titanosilicalite-1 (TS-1) is among the most successful oxidation catalysts used in industry, its active site structure is still debated. Recent efforts have mostly focused on understanding the role of defect sites and extraframework Ti. Here, we report the 47/49Ti signature of TS-1 and molecular analogues [Ti(OTBOS)4] and [Ti(OTBOS)3(OiPr)] using novel MAS CryoProbe to enhance the sensitivity. While the dehydrated TS-1 displays chemical shifts similar to those of molecular homologues, confirming the tetrahedral environment of Ti consistent with X-ray absorption spectroscopy, it is associated with a distribution of larger quadrupolar coupling constants, indicating an asymmetric environment. Detailed computational studies on cluster models highlights the high sensitivity of the NMR signatures (chemical shift and quadrupolar coupling constant) to small local structural changes. These calculations show that, while it will be difficult to distinguish mono- vs dinuclear sites, the sensitivity of the 47/49Ti NMR signature should enable distinguishing the Ti location among specific T site positions.

6.
Angew Chem Int Ed Engl ; 62(50): e202312713, 2023 Dec 11.
Artigo em Inglês | MEDLINE | ID: mdl-37869935

RESUMO

Converting colloidal nanocrystals (NCs) into devices for various applications is facilitated by designing and controlling their surface properties. One key strategy for tailoring surface properties is thus to choose tailored surface ligands. In that context, amines have been universally used, with the goal to improve NCs synthesis, processing and performances. However, understanding the nature of surface sites in amine-capped NCs remains challenging, due to the complex surface compositions as well as surface ligands dynamic. Here, we investigate both surface sites and amine ligation in CdSe NCs by combining advanced NMR spectroscopy and computational modelling. Notably, dynamic nuclear polarization (DNP) enhanced 113 Cd and 77 Se 1D NMR helps to identify both bulk and surface sites of NCs, while 113 Cd 2D NMR spectroscopy enables to resolve amines terminated sites on both Se-rich and nonpolar surfaces. In addition to directly bonding to surface sites, amines are shown to also interact through hydrogen-bonding with absorbed water as revealed by 15 N NMR, augmented with computations. The characterization methodology developed for this work provides unique molecular-level insight into the surface sites of a range of amine-capped CdSe NCs, and paves the way to identify structure-function relationships and rational approaches towards colloidal NCs with tailored properties.

7.
J Am Chem Soc ; 144(23): 10377-10385, 2022 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-35702886

RESUMO

Zeolites, although key materials used in industrial processes, remain poorly understood on a molecular level despite their well-defined crystal lattices. In fact, obtaining a direct spectroscopic signatures and resolving the structure of Lewis acid sites (LAS) has remained a challenge. In this work, thanks to 1D and 2D 1H, 15N, and 27Al MAS NMR spectroscopy, carried out at different temperatures (from 298 down to 107 K), we were able to obtain the NMR spectroscopic signatures of LAS and Brønsted acid sites (BAS) in mordenite zeolite in the presence and the absence of adsorbed pyridine (Py). Combined with DFT modeling, this information enabled the structure of LAS to be revealed, namely (≡SiO)3Al sites interacting with pyridine, thus indicating that the corresponding base-free framework-associated sites are pseudo tricoordinated Al sites, namely tricoordinated Al sites interacting with an additional coordinated adjacent siloxane bridge. With this information in hand, we propose a molecular-level understanding on how the AlIV and AlVI framework and framework-associated sites evolve upon dehydration and exposure to Py into BAS and LAS, and their associated Py adducts. By measuring and analyzing the changes in quadrupolar coupling constants (CQ) that reflect electrical charge distribution around the nuclei, we further show that the lower CQ values observed at 298 K are due to residual dynamics that makes the electric field around aluminum nuclei more symmetric. Thus, NMR spectroscopic signatures of 27Al greatly vary with temperature; this information illustrates the importance of accounting for the temperature effect when confronting experimental and calculated CQ values of the corresponding aluminum sites in zeolites in order to obtain accurate structural assessment.

8.
Biochem Biophys Res Commun ; 614: 29-33, 2022 07 23.
Artigo em Inglês | MEDLINE | ID: mdl-35567941

RESUMO

RecA is a central enzyme of homologous recombination in bacteria, which plays a major role in DNA repair, natural transformation and SOS-response activation. RecA forms nucleoprotein filaments on single-stranded DNA with a highly conserved architecture that is also shared by eukaryotic recombinases. One of the key features of these filaments is the ability to switch between stretched and compressed conformations in response to ATP binding and hydrolysis. However, the functional role of such conformational changes is not fully understood. Structural data revealed that in the absence of ATP RecA binds DNA with the stoichiometry of 5 nucleotides per one monomer, while in the presence of ATP the binding stoichiometry is 3:1. Such differences suggest incompatibility of the active and inactive conformations, yet dynamic single-molecule studies demonstrated that ATP and apo conformations can be directly interconvertible. In the present work we use a single-molecule approach to address the features of inactive RecA nucleoprotein filaments formed de novo in the absence of nucleotide cofactors. We show that compressed RecA-DNA filaments can exist with both 5:1 and 3:1 binding stoichiometry which is determined by conditions of the filament assembly. However, only a 3:1 stoichiometry allows direct interconvertibility with the active ATP-bound conformation.


Assuntos
Nucleoproteínas , Recombinases Rec A , Trifosfato de Adenosina/metabolismo , DNA/metabolismo , DNA de Cadeia Simples , Nucleoproteínas/metabolismo , Nucleotídeos , Recombinases Rec A/metabolismo
9.
Small ; 18(33): e2202080, 2022 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-35678101

RESUMO

The ability to tailor the properties of metal centers in single-atom heterogeneous catalysts depends on the availability of advanced approaches for characterization of their structure. Except for specific host materials with well-defined metal adsorption sites, determining the local atomic environment remains a crucial challenge, often relying heavily on simulations. This article reports an advanced analysis of platinum atoms stabilized on poly(triazine imide), a nanocrystalline form of carbon nitride. The approach discriminates the distribution of surface coordination sites in the host, the evolution of metal coordination at different stages during the synthesis of the material, and the potential locations of metal atoms within the lattice. Consistent with density functional theory predictions, simultaneous high-resolution imaging in high-angle annular dark field and bright field modes experimentally confirms the preferred localization of platinum in-plane in the corners of the triangular cavities. X-ray absorption spectroscopy (XAS), X-ray photoelectron spectroscopy (XPS), and dynamic nuclear polarization enhanced 15 N nuclear magnetic resonance (DNP-NMR) spectroscopies coupled with density functional theory (DFT) simulations reveal that the predominant metal species comprise Pt(II) bound to three nitrogen atoms and one chlorine atom inside the coordination sites. The findings, which narrow the gap between experimental and theoretical elucidation, contribute to the improved structural understanding and provide a benchmark for exploring the speciation of single-atom catalysts based on carbon nitrides.

10.
Inorg Chem ; 61(27): 10575-10586, 2022 Jul 11.
Artigo em Inglês | MEDLINE | ID: mdl-35766898

RESUMO

The development of an efficient heterogeneous catalyst for storing H2 into CO2 and releasing it from the produced formic acid, when needed, is a crucial target for overcoming some intrinsic criticalities of green hydrogen exploitation, such as high flammability, low density, and handling. Herein, we report an efficient heterogeneous catalyst for both reactions prepared by immobilizing a molecular iridium organometallic catalyst onto a high-surface mesoporous silica, through a sol-gel methodology. The presence of tailored single-metal catalytic sites, derived by a suitable choice of ligands with desired steric and electronic characteristics, in combination with optimized support features, makes the immobilized catalyst highly active. Furthermore, the information derived from multinuclear DNP-enhanced NMR spectroscopy, elemental analysis, and Ir L3-edge XAS indicates the formation of cationic iridium sites. It is quite remarkable to note that the immobilized catalyst shows essentially the same catalytic activity as its molecular analogue in the hydrogenation of CO2. In the reverse reaction of HCOOH dehydrogenation, it is approximately twice less active but has no induction period.


Assuntos
Dióxido de Carbono , Irídio , Dióxido de Carbono/química , Formiatos , Hidrogenação , Irídio/química , Ácidos Picolínicos , Dióxido de Silício
11.
Nucleic Acids Res ; 47(20): 10553-10563, 2019 11 18.
Artigo em Inglês | MEDLINE | ID: mdl-31598715

RESUMO

A large variety of short biologically active peptides possesses antioxidant, antibacterial, antitumour, anti-ageing and anti-inflammatory activity, involved in the regulation of neuro-immuno-endocrine system functions, cell apoptosis, proliferation and differentiation. Therefore, the mechanisms of their biological activity are attracting increasing attention not only in modern molecular biology, biochemistry and biophysics, but also in pharmacology and medicine. In this work, we systematically analysed the ability of dipeptides (all possible combinations of the 20 standard amino acids) to bind all possible combinations of tetra-nucleotides in the central part of dsDNA in the classic B-form using molecular docking and molecular dynamics. The vast majority of the dipeptides were found to be unable to bind dsDNA. However, we were able to identify 57 low-energy dipeptide complexes with peptide-dsDNA possessing high selectivity for DNA binding. The analysis of the dsDNA complexes with dipeptides with free and blocked N- and C-terminus showed that selective peptide binding to dsDNA can increase dramatically with the peptide length.


Assuntos
DNA/química , Dipeptídeos/química , Simulação de Acoplamento Molecular , Motivos de Nucleotídeos , Análise de Sequência de DNA/métodos , DNA/metabolismo , Dipeptídeos/metabolismo , Ligação Proteica
12.
Int J Mol Sci ; 22(3)2021 Jan 30.
Artigo em Inglês | MEDLINE | ID: mdl-33573263

RESUMO

Nicotinamide riboside (NR), a new form of vitamin B3, is an effective precursor of nicotinamide adenine dinucleotide (NAD+) in human and animal cells. The introduction of NR into the body effectively increases the level of intracellular NAD+ and thereby restores physiological functions that are weakened or lost in experimental models of aging and various pathologies. Despite the active use of NR in applied biomedicine, the mechanism of its transport into mammalian cells is currently not understood. In this study, we used overexpression of proteins in HEK293 cells, and metabolite detection by NMR, to show that extracellular NR can be imported into cells by members of the equilibrative nucleoside transporter (ENT) family ENT1, ENT2, and ENT4. After being imported into cells, NR is readily metabolized resulting in Nam generation. Moreover, the same ENT-dependent mechanism can be used to import the deamidated form of NR, nicotinic acid riboside (NAR). However, NAR uptake into HEK293 cells required the stimulation of its active utilization in the cytosol such as phosphorylation by NR kinase. On the other hand, we did not detect any NR uptake mediated by the concentrative nucleoside transporters (CNT) CNT1, CNT2, or CNT3, while overexpression of CNT3, but not CNT1 or CNT2, moderately stimulated NAR utilization by HEK293 cells.


Assuntos
Proteínas de Transporte de Nucleosídeo Equilibrativas/metabolismo , Proteínas de Membrana Transportadoras/metabolismo , Niacinamida/análogos & derivados , Compostos de Piridínio/metabolismo , Ribonucleosídeos/metabolismo , Envelhecimento/metabolismo , Citosol/metabolismo , Proteínas de Transporte de Nucleosídeo Equilibrativas/genética , Células HEK293 , Humanos , Espectroscopia de Ressonância Magnética , Proteínas de Membrana Transportadoras/análise , Proteínas de Membrana Transportadoras/genética , Metabolômica , NAD/análise , NAD/metabolismo , Niacinamida/análise , Niacinamida/metabolismo , Mononucleotídeo de Nicotinamida/metabolismo , Fosforilação/fisiologia , Fosfotransferases (Aceptor do Grupo Álcool)/metabolismo , Compostos de Piridínio/análise , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Ribonucleosídeos/análise
13.
Int J Mol Sci ; 21(19)2020 Oct 07.
Artigo em Inglês | MEDLINE | ID: mdl-33036395

RESUMO

Deinococcus radiodurans (Dr) has one of the most robust DNA repair systems, which is capable of withstanding extreme doses of ionizing radiation and other sources of DNA damage. DrRecA, a central enzyme of recombinational DNA repair, is essential for extreme radioresistance. In the presence of ATP, DrRecA forms nucleoprotein filaments on DNA, similar to other bacterial RecA and eukaryotic DNA strand exchange proteins. However, DrRecA catalyzes DNA strand exchange in a unique reverse pathway. Here, we study the dynamics of DrRecA filaments formed on individual molecules of duplex and single-stranded DNA, and we follow conformational transitions triggered by ATP hydrolysis. Our results reveal that ATP hydrolysis promotes rapid DrRecA dissociation from duplex DNA, whereas on single-stranded DNA, DrRecA filaments interconvert between stretched and compressed conformations, which is a behavior shared by E. coli RecA and human Rad51. This indicates a high conservation of conformational switching in nucleoprotein filaments and suggests that additional factors might contribute to an inverse pathway of DrRecA strand exchange.


Assuntos
Trifosfato de Adenosina/química , Proteínas de Bactérias/química , Deinococcus/enzimologia , Modelos Moleculares , Conformação Molecular , Recombinases Rec A/química , Imagem Individual de Molécula , Trifosfato de Adenosina/metabolismo , Proteínas de Bactérias/metabolismo , DNA de Cadeia Simples/química , DNA de Cadeia Simples/metabolismo , Proteínas de Ligação a DNA/química , Proteínas de Ligação a DNA/metabolismo , Hidrólise , Simulação de Acoplamento Molecular , Simulação de Dinâmica Molecular , Recombinases Rec A/metabolismo , Imagem Individual de Molécula/métodos
14.
Nat Chem Biol ; 13(10): 1129-1136, 2017 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-28846667

RESUMO

Whereas screening of the small-molecule metabolites produced by most cultivatable microorganisms often results in the rediscovery of known compounds, genome-mining programs allow researchers to harness much greater chemical diversity, and result in the discovery of new molecular scaffolds. Here we report the genome-guided identification of a new antibiotic, klebsazolicin (KLB), from Klebsiella pneumoniae that inhibits the growth of sensitive cells by targeting ribosomes. A ribosomally synthesized post-translationally modified peptide (RiPP), KLB is characterized by the presence of a unique N-terminal amidine ring that is essential for its activity. Biochemical in vitro studies indicate that KLB inhibits ribosomes by interfering with translation elongation. Structural analysis of the ribosome-KLB complex showed that the compound binds in the peptide exit tunnel overlapping with the binding sites of macrolides or streptogramin-B. KLB adopts a compact conformation and largely obstructs the tunnel. Engineered KLB fragments were observed to retain in vitro activity, and thus have the potential to serve as a starting point for the development of new bioactive compounds.


Assuntos
Antibacterianos/farmacologia , Klebsiella pneumoniae/química , Peptídeos/farmacologia , Ribossomos/química , Ribossomos/efeitos dos fármacos , Antibacterianos/química , Antibacterianos/metabolismo , Sítios de Ligação/efeitos dos fármacos , Clonagem Molecular , Klebsiella pneumoniae/metabolismo , Peptídeos/química , Peptídeos/metabolismo , Engenharia de Proteínas
15.
Nucleic Acids Res ; 45(16): 9788-9796, 2017 Sep 19.
Artigo em Inglês | MEDLINE | ID: mdl-28934502

RESUMO

The RecX protein, a very active natural RecA protein inhibitor, can completely disassemble RecA filaments at nanomolar concentrations that are two to three orders of magnitude lower than that of RecA protein. Based on the structure of RecX protein complex with the presynaptic RecA filament, we designed a short first in class α-helical peptide that both inhibits RecA protein activities in vitro and blocks the bacterial SOS-response in vivo. The peptide was designed using SEQOPT, a novel method for global sequence optimization of protein α-helices. SEQOPT produces artificial peptide sequences containing only 20 natural amino acids with the maximum possible conformational stability at a given pH, ionic strength, temperature, peptide solubility. It also accounts for restrictions due to known amino acid residues involved in stabilization of protein complexes under consideration. The results indicate that a few key intermolecular interactions inside the RecA protein presynaptic complex are enough to reproduce the main features of the RecX protein mechanism of action. Since the SOS-response provides a major mechanism of bacterial adaptation to antibiotics, these results open new ways for the development of antibiotic co-therapy that would not cause bacterial resistance.


Assuntos
Peptídeos/química , Peptídeos/farmacologia , Recombinases Rec A/antagonistas & inibidores , Resposta SOS em Genética/efeitos dos fármacos , Dicroísmo Circular , DNA/metabolismo , Escherichia coli/efeitos dos fármacos , Escherichia coli/metabolismo , Escherichia coli/efeitos da radiação , Proteínas de Escherichia coli/química , Proteínas de Escherichia coli/metabolismo , Modelos Moleculares , Conformação Proteica , Estabilidade Proteica , Recombinases Rec A/química , Recombinases Rec A/metabolismo , Resposta SOS em Genética/efeitos da radiação , Raios Ultravioleta
16.
Int J Mol Sci ; 19(12)2018 Dec 06.
Artigo em Inglês | MEDLINE | ID: mdl-30563212

RESUMO

Nicotinamide adenine dinucleotide (NAD) and its phosphorylated form, NADP, are the major coenzymes of redox reactions in central metabolic pathways. Nicotinamide adenine dinucleotide is also used to generate second messengers, such as cyclic ADP-ribose, and serves as substrate for protein modifications including ADP-ribosylation and protein deacetylation by sirtuins. The regulation of these metabolic and signaling processes depends on NAD availability. Generally, human cells accomplish their NAD supply through biosynthesis using different forms of vitamin B3: Nicotinamide (Nam) and nicotinic acid as well as nicotinamide riboside (NR) and nicotinic acid riboside (NAR). These precursors are converted to the corresponding mononucleotides NMN and NAMN, which are adenylylated to the dinucleotides NAD and NAAD, respectively. Here, we have developed an NMR-based experimental approach to detect and quantify NAD(P) and its biosynthetic intermediates in human cell extracts. Using this method, we have determined NAD, NADP, NMN and Nam pools in HEK293 cells cultivated in standard culture medium containing Nam as the only NAD precursor. When cells were grown in the additional presence of both NAR and NR, intracellular pools of deamidated NAD intermediates (NAR, NAMN and NAAD) were also detectable. We have also tested this method to quantify NAD+ in human platelets and erythrocytes. Our results demonstrate that ¹H NMR spectroscopy provides a powerful method for the assessment of the cellular NAD metabolome.


Assuntos
Técnicas de Cultura de Células/métodos , Metabolômica/métodos , NAD/análise , Plaquetas/química , Eritrócitos/química , Células HEK293 , Humanos , Redes e Vias Metabólicas , NADP/análise , Niacina/análise , Niacinamida/análise , Espectroscopia de Prótons por Ressonância Magnética
17.
Angew Chem Int Ed Engl ; 56(48): 15344-15347, 2017 11 27.
Artigo em Inglês | MEDLINE | ID: mdl-28940783

RESUMO

Time-resolved 13 C, 23 Na, 27 Al, and 29 Si MAS NMR has been applied in situ for monitoring the hydrothermal synthesis of zeolite BEA. Isotopic labelling with 29 Si and 13 C isotopes has been used to follow the fate of siliceous species and structure directing agent ((13 CH3 -CH2 )4 NOH). Two mechanistic pathways, namely solution-mediated and solid-solid hydrogel rearrangement have been distinguished for two synthesis procedures studied. The mechanisms of structure-directing behavior of TEA+ cations in two reaction pathways have been elucidated. The results show that multinuclear MAS NMR can serve as a superior tool for monitoring hydrothermal synthesis of various solids including zeolites, zeotypes, mesoporous materials, metal-organic frameworks and so on and for the design of novel outstanding materials for different applications.

18.
J Biol Chem ; 290(45): 27124-27137, 2015 Nov 06.
Artigo em Inglês | MEDLINE | ID: mdl-26385918

RESUMO

NAD is essential for cellular metabolism and has a key role in various signaling pathways in human cells. To ensure proper control of vital reactions, NAD must be permanently resynthesized. Nicotinamide and nicotinic acid as well as nicotinamide riboside (NR) and nicotinic acid riboside (NAR) are the major precursors for NAD biosynthesis in humans. In this study, we explored whether the ribosides NR and NAR can be generated in human cells. We demonstrate that purified, recombinant human cytosolic 5'-nucleotidases (5'-NTs) CN-II and CN-III, but not CN-IA, can dephosphorylate the mononucleotides nicotinamide mononucleotide and nicotinic acid mononucleotide (NAMN) and thus catalyze NR and NAR formation in vitro. Similar to their counterpart from yeast, Sdt1, the human 5'-NTs require high (millimolar) concentrations of nicotinamide mononucleotide or NAMN for efficient catalysis. Overexpression of FLAG-tagged CN-II and CN-III in HEK293 and HepG2 cells resulted in the formation and release of NAR. However, NAR accumulation in the culture medium of these cells was only detectable under conditions that led to increased NAMN production from nicotinic acid. The amount of NAR released from cells engineered for increased NAMN production was sufficient to maintain viability of surrounding cells unable to use any other NAD precursor. Moreover, we found that untransfected HeLa cells produce and release sufficient amounts of NAR and NR under normal culture conditions. Collectively, our results indicate that cytosolic 5'-NTs participate in the conversion of NAD precursors and establish NR and NAR as integral constituents of human NAD metabolism. In addition, they point to the possibility that different cell types might facilitate each other's NAD supply by providing alternative precursors.


Assuntos
NAD/biossíntese , Ribonucleosídeos/biossíntese , 5'-Nucleotidase/metabolismo , Citocinas/metabolismo , Células HEK293 , Células Hep G2 , Humanos , Cinética , Espectroscopia de Ressonância Magnética , Redes e Vias Metabólicas , Niacina/metabolismo , Niacinamida/análogos & derivados , Niacinamida/biossíntese , Niacinamida/metabolismo , Nicotinamida Fosforribosiltransferase/metabolismo , Pentosiltransferases/metabolismo , Fosforilação , Compostos de Piridínio , Proteínas Recombinantes/metabolismo , Ribonucleosídeos/metabolismo , Transdução de Sinais , Especificidade por Substrato
19.
Chem Sci ; 15(8): 3028-3032, 2024 Feb 22.
Artigo em Inglês | MEDLINE | ID: mdl-38404381

RESUMO

Molecular-level understanding of the acid/base properties of heterogeneous catalysts requires the development of selective spectroscopic probes to establish structure-activity relationships. In this work we show that substituting the surface protons in oxide supports by isolobal N-heterocyclic carbene (NHC) Ag cations and measuring their 109Ag nuclear magnetic resonance (NMR) signatures enables to probe the speciation and to evaluate the corresponding Brønsted acidity of the substituted OH surface sites. Specifically, a series of silver N-heterocyclic carbene (NHC) Ag(i) complexes of general formula [(NHC)AgX] are synthesized and characterized, showing that the 109Ag NMR chemical shift of the series correlates with the Brønsted acidity of the conjugate acid of X- (i.e., HX), thus establishing an acidity scale based on 109Ag NMR chemical shift. The methodology is then used to evaluate the Brønsted acidity of the OH sites of representative oxide materials using Dynamic Nuclear Polarization (DNP-)enhanced solid-state NMR spectroscopy.

20.
J Phys Chem Lett ; 15(11): 3178-3184, 2024 Mar 21.
Artigo em Inglês | MEDLINE | ID: mdl-38478985

RESUMO

Treatment of Ziegler-Natta (ZN) catalysts with BCl3 improves their activity by increasing the number of active sites. Here we show how 47/49Ti solid-state nuclear magnetic resonance (NMR) spectroscopy enables us to understand the electronic structure of the Ti surface sites present in such treated ZN pre-catalysts, prior to activation with alkyl aluminum. High-field (21.1 T) and low-temperature (∼100 K) NMR augmented by DFT modeling on the pre-catalyst and corresponding molecular analogues enables the detection of 47/49Ti NMR signatures and a molecular level understanding of the electronic structure of Ti surface sites. The associated Ti surface sites exhibit 49Ti NMR signatures (δiso, exp = -170 ppm; CQ, exp = 9.3 MHz; κ = 0.05) corresponding to well-defined fully chlorinated hexacoordinated Ti sites adsorbed on a distorted surface of the MgCl2 support, formed upon post-treatment with BCl3 and removal of the alkoxo ligands, paralleling the increased polymerization activity.

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