Detalhe da pesquisa
1.
Data integration and inference of gene regulation using single-cell temporal multimodal data with scTIE.
Genome Res
; 34(1): 119-133, 2024 Feb 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-38190633
2.
Benchmarking of analytical combinations for COVID-19 outcome prediction using single-cell RNA sequencing data.
Brief Bioinform
; 24(3)2023 05 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-37096588
3.
scSTAR reveals hidden heterogeneity with a real-virtual cell pair structure across conditions in single-cell RNA sequencing data.
Brief Bioinform
; 24(2)2023 03 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-36813563
4.
Ensemble deep learning of embeddings for clustering multimodal single-cell omics data.
Bioinformatics
; 39(6)2023 06 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-37314966
5.
A field guide to cultivating computational biology.
PLoS Biol
; 19(10): e3001419, 2021 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-34618807
6.
Investigating higher-order interactions in single-cell data with scHOT.
Nat Methods
; 17(8): 799-806, 2020 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-32661426
7.
Comparing Genomic Landscapes of Oral and Cutaneous Squamous Cell Carcinoma of the Head and Neck: Quest for Novel Diagnostic Markers.
Mod Pathol
; 36(8): 100190, 2023 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-37080394
8.
scFeatures: multi-view representations of single-cell and spatial data for disease outcome prediction.
Bioinformatics
; 38(20): 4745-4753, 2022 10 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-36040148
9.
Scalable workflow for characterization of cell-cell communication in COVID-19 patients.
PLoS Comput Biol
; 18(10): e1010495, 2022 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-36197936
10.
Immunoglobulin E Sensitization to Mammalian Oligosaccharide Galactose-α-1,3 (α-Gal) Is Associated With Noncalcified Plaque, Obstructive Coronary Artery Disease, and ST-Segment-Elevated Myocardial Infarction.
Arterioscler Thromb Vasc Biol
; 42(3): 352-361, 2022 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-35045730
11.
A Multi-Step Precision Pathway for Predicting Allograft Survival in Heterogeneous Cohorts of Kidney Transplant Recipients.
Transpl Int
; 36: 11338, 2023.
Artigo
em Inglês
| MEDLINE | ID: mdl-37767525
12.
Whole-genome landscapes of major melanoma subtypes.
Nature
; 545(7653): 175-180, 2017 05 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-28467829
13.
Whole genome duplication in oral squamous cell carcinoma in patients younger than 50 years: implications for prognosis and adverse clinicopathological factors.
Genes Chromosomes Cancer
; 61(9): 561-571, 2022 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-35670448
14.
Factors Associated With Advanced Colorectal Neoplasia in Patients With CKD.
Am J Kidney Dis
; 79(4): 549-560, 2022 Apr.
Artigo
em Inglês
| MEDLINE | ID: mdl-34461168
15.
scMerge leverages factor analysis, stable expression, and pseudoreplication to merge multiple single-cell RNA-seq datasets.
Proc Natl Acad Sci U S A
; 116(20): 9775-9784, 2019 05 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-31028141
16.
Prediction modeling-part 2: using machine learning strategies to improve transplantation outcomes.
Kidney Int
; 99(4): 817-823, 2021 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-32916179
17.
Impact of similarity metrics on single-cell RNA-seq data clustering.
Brief Bioinform
; 20(6): 2316-2326, 2019 11 27.
Artigo
em Inglês
| MEDLINE | ID: mdl-30137247
18.
CiteFuse enables multi-modal analysis of CITE-seq data.
Bioinformatics
; 36(14): 4137-4143, 2020 08 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-32353146
19.
scClassify: sample size estimation and multiscale classification of cells using single and multiple reference.
Mol Syst Biol
; 16(6): e9389, 2020 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-32567229
20.
Psychosocial stratification of antenatal indicators to guide population-based programs in perinatal depression.
BMC Pregnancy Childbirth
; 21(1): 277, 2021 Apr 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-33823838