Detalhe da pesquisa
1.
Ensemble deep learning of embeddings for clustering multimodal single-cell omics data.
Bioinformatics
; 39(6)2023 06 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-37314966
2.
Investigating higher-order interactions in single-cell data with scHOT.
Nat Methods
; 17(8): 799-806, 2020 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-32661426
3.
scFeatures: multi-view representations of single-cell and spatial data for disease outcome prediction.
Bioinformatics
; 38(20): 4745-4753, 2022 10 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-36040148
4.
A Multi-Step Precision Pathway for Predicting Allograft Survival in Heterogeneous Cohorts of Kidney Transplant Recipients.
Transpl Int
; 36: 11338, 2023.
Artigo
em Inglês
| MEDLINE | ID: mdl-37767525
5.
scMerge leverages factor analysis, stable expression, and pseudoreplication to merge multiple single-cell RNA-seq datasets.
Proc Natl Acad Sci U S A
; 116(20): 9775-9784, 2019 05 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-31028141
6.
Prediction modeling-part 2: using machine learning strategies to improve transplantation outcomes.
Kidney Int
; 99(4): 817-823, 2021 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-32916179
7.
Impact of similarity metrics on single-cell RNA-seq data clustering.
Brief Bioinform
; 20(6): 2316-2326, 2019 11 27.
Artigo
em Inglês
| MEDLINE | ID: mdl-30137247
8.
CiteFuse enables multi-modal analysis of CITE-seq data.
Bioinformatics
; 36(14): 4137-4143, 2020 08 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-32353146
9.
scClassify: sample size estimation and multiscale classification of cells using single and multiple reference.
Mol Syst Biol
; 16(6): e9389, 2020 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-32567229
10.
Psychosocial stratification of antenatal indicators to guide population-based programs in perinatal depression.
BMC Pregnancy Childbirth
; 21(1): 277, 2021 Apr 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-33823838
11.
QCMAP: An Interactive Web-Tool for Performance Diagnosis and Prediction of LC-MS Systems.
Proteomics
; 19(13): e1900068, 2019 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-31099962
12.
scReClassify: post hoc cell type classification of single-cell rNA-seq data.
BMC Genomics
; 20(Suppl 9): 913, 2019 Dec 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-31874628
13.
Integrative analysis identifies co-dependent gene expression regulation of BRG1 and CHD7 at distal regulatory sites in embryonic stem cells.
Bioinformatics
; 33(13): 1916-1920, 2017 Jul 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-28203701
14.
Nodal and BMP expression during the transition to pentamery in the sea urchin Heliocidaris erythrogramma: insights into patterning the enigmatic echinoderm body plan.
BMC Dev Biol
; 17(1): 4, 2017 02 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-28193178
15.
KinasePA: Phosphoproteomics data annotation using hypothesis driven kinase perturbation analysis.
Proteomics
; 16(13): 1868-71, 2016 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-27145998
16.
Knowledge-Based Analysis for Detecting Key Signaling Events from Time-Series Phosphoproteomics Data.
PLoS Comput Biol
; 11(8): e1004403, 2015 Aug.
Artigo
em Inglês
| MEDLINE | ID: mdl-26252020
17.
PhosphOrtholog: a web-based tool for cross-species mapping of orthologous protein post-translational modifications.
BMC Genomics
; 16: 617, 2015 Aug 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-26283093
18.
Determination of prognosis in metastatic melanoma through integration of clinico-pathologic, mutation, mRNA, microRNA, and protein information.
Int J Cancer
; 136(4): 863-74, 2015 Feb 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-24975271
19.
Construction and optimization of multi-platform precision pathways for precision medicine.
Sci Rep
; 14(1): 4248, 2024 02 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-38378802
20.
OCAP: an open comprehensive analysis pipeline for iTRAQ.
Bioinformatics
; 28(10): 1404-5, 2012 May 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-22467906