Pesquisa | Portal de Pesquisa da BVS

1.

Plant Genome Editing and the Relevance of Off-Target Changes.

Graham, Nathaniel; Patil, Gunvant B; Bubeck, David M; Dobert, Raymond C; Glenn, Kevin C; Gutsche, Annie T; Kumar, Sandeep; Lindbo, John A; Maas, Luis; May, Gregory D; Vega-Sanchez, Miguel E; Stupar, Robert M; Morrell, Peter L.

Plant Physiol ; 183(4): 1453-1471, 2020 08.

Artigo em Inglês | MEDLINE | ID: mdl-32457089

2.

Mining Fiskeby III and Mandarin (Ottawa) Expression Profiles to Understand Iron Stress Tolerant Responses in Soybean.

O'Rourke, Jamie A; Morrisey, Michael J; Merry, Ryan; Espina, Mary Jane; Lorenz, Aaron J; Stupar, Robert M; Graham, Michelle A.

Int J Mol Sci ; 22(20)2021 Oct 13.

Artigo em Inglês | MEDLINE | ID: mdl-34681702

3.

Integration, abundance, and transmission of mutations and transgenes in a series of CRISPR/Cas9 soybean lines.

Michno, Jean-Michel; Virdi, Kamaldeep; Stec, Adrian O; Liu, Junqi; Wang, Xiaobo; Xiong, Yer; Stupar, Robert M.

BMC Biotechnol ; 20(1): 10, 2020 02 24.

Artigo em Inglês | MEDLINE | ID: mdl-32093670

4.

Protoplast Isolation, Transfection, and Gene Editing for Soybean (Glycine max ).

Patil, Gunvant B; Stupar, Robert M; Zhang, Feng.

Methods Mol Biol ; 2464: 173-186, 2022.

Artigo em Inglês | MEDLINE | ID: mdl-35258833

5.

Fast neutron mutagenesis in soybean enriches for small indels and creates frameshift mutations.

Wyant, Skylar R; Rodriguez, M Fernanda; Carter, Corey K; Parrott, Wayne A; Jackson, Scott A; Stupar, Robert M; Morrell, Peter L.

G3 (Bethesda) ; 12(2)2022 02 04.

Artigo em Inglês | MEDLINE | ID: mdl-35100358

6.

Dissecting nematode resistance regions in soybean revealed pleiotropic effect of soybean cyst and reniform nematode resistance genes.

Usovsky, Mariola; Lakhssassi, Naoufal; Patil, Gunvant B; Vuong, Tri D; Piya, Sarbottam; Hewezi, Tarek; Robbins, Robert T; Stupar, Robert M; Meksem, Khalid; Nguyen, Henry T.

Plant Genome ; 14(2): e20083, 2021 07.

Artigo em Inglês | MEDLINE | ID: mdl-33724721

7.

Development of mPing-based activation tags for crop insertional mutagenesis.

Johnson, Alexander; Mcassey, Edward; Diaz, Stephanie; Reagin, Jacob; Redd, Priscilla S; Parrilla, Daymond R; Nguyen, Hanh; Stec, Adrian; McDaniel, Lauren A L; Clemente, Thomas E; Stupar, Robert M; Parrott, Wayne A; Hancock, C Nathan.

Plant Direct ; 5(1): e00300, 2021 Jan.

Artigo em Inglês | MEDLINE | ID: mdl-33506165

8.

Construction and comparison of three reference-quality genome assemblies for soybean.

Valliyodan, Babu; Cannon, Steven B; Bayer, Philipp E; Shu, Shengqiang; Brown, Anne V; Ren, Longhui; Jenkins, Jerry; Chung, Claire Y-L; Chan, Ting-Fung; Daum, Christopher G; Plott, Christopher; Hastie, Alex; Baruch, Kobi; Barry, Kerrie W; Huang, Wei; Patil, Gunvant; Varshney, Rajeev K; Hu, Haifei; Batley, Jacqueline; Yuan, Yuxuan; Song, Qijian; Stupar, Robert M; Goodstein, David M; Stacey, Gary; Lam, Hon-Ming; Jackson, Scott A; Schmutz, Jeremy; Grimwood, Jane; Edwards, David; Nguyen, Henry T.

Plant J ; 100(5): 1066-1082, 2019 12.

Artigo em Inglês | MEDLINE | ID: mdl-31433882

9.

Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium).

Chaudhary, Bhupendra; Flagel, Lex; Stupar, Robert M; Udall, Joshua A; Verma, Neetu; Springer, Nathan M; Wendel, Jonathan F.

Genetics ; 182(2): 503-17, 2009 Jun.

Artigo em Inglês | MEDLINE | ID: mdl-19363125

10.

Identification of nodulation-related genes in Medicago truncatula using genome-wide association studies and co-expression networks.

Michno, Jean-Michel; Liu, Junqi; Jeffers, Joseph R; Stupar, Robert M; Myers, Chad L.

Plant Direct ; 4(5): e00220, 2020 May.

Artigo em Inglês | MEDLINE | ID: mdl-32426691

11.

Characterization of genetic heterogeneity within accessions in the USDA soybean germplasm collection.

Mihelich, Nicole T; Mulkey, Steven E; Stec, Adrian O; Stupar, Robert M.

Plant Genome ; 13(1): e20000, 2020 03.

Artigo em Inglês | MEDLINE | ID: mdl-33016628

12.

Similar Seed Composition Phenotypes Are Observed From CRISPR-Generated In-Frame and Knockout Alleles of a Soybean KASI Ortholog.

Virdi, Kamaldeep S; Spencer, Madison; Stec, Adrian O; Xiong, Yer; Merry, Ryan; Muehlbauer, Gary J; Stupar, Robert M.

Front Plant Sci ; 11: 1005, 2020.

Artigo em Inglês | MEDLINE | ID: mdl-32774339

13.

Screening populations for copy number variation using genotyping-by-sequencing: a proof of concept using soybean fast neutron mutants.

Lemay, Marc-André; Torkamaneh, Davoud; Rigaill, Guillem; Boyle, Brian; Stec, Adrian O; Stupar, Robert M; Belzile, François.

BMC Genomics ; 20(1): 634, 2019 Aug 06.

Artigo em Inglês | MEDLINE | ID: mdl-31387530

14.

Genomic changes and biochemical alterations of seed protein and oil content in a subset of fast neutron induced soybean mutants.

Islam, Nazrul; Stupar, Robert M; Qijian, Song; Luthria, Devanand L; Garrett, Wesley; Stec, Adrian O; Roessler, Jeff; Natarajan, Savithiry S.

BMC Plant Biol ; 19(1): 420, 2019 Oct 12.

Artigo em Inglês | MEDLINE | ID: mdl-31604426

15.

Whole-genome re-sequencing reveals the impact of the interaction of copy number variants of the rhg1 and Rhg4 genes on broad-based resistance to soybean cyst nematode.

Patil, Gunvant B; Lakhssassi, Naoufal; Wan, Jinrong; Song, Li; Zhou, Zhou; Klepadlo, Mariola; Vuong, Tri D; Stec, Adrian O; Kahil, Sondus S; Colantonio, Vincent; Valliyodan, Babu; Rice, J Hollis; Piya, Sarbottam; Hewezi, Tarek; Stupar, Robert M; Meksem, Khalid; Nguyen, Henry T.

Plant Biotechnol J ; 17(8): 1595-1611, 2019 08.

Artigo em Inglês | MEDLINE | ID: mdl-30688400

16.

Identification and characterization of a fast-neutron-induced mutant with elevated seed protein content in soybean.

Prenger, Elizabeth M; Ostezan, Alexandra; Mian, M A Rouf; Stupar, Robert M; Glenn, Travis; Li, Zenglu.

Theor Appl Genet ; 132(11): 2965-2983, 2019 Nov.

Artigo em Inglês | MEDLINE | ID: mdl-31324928

17.

The importance of genotype identity, genetic heterogeneity, and bioinformatic handling for properly assessing genomic variation in transgenic plants.

Michno, Jean-Michel; Stupar, Robert M.

BMC Biotechnol ; 18(1): 38, 2018 06 01.

Artigo em Inglês | MEDLINE | ID: mdl-29859067

18.

Gene expression analyses in maize inbreds and hybrids with varying levels of heterosis.

Stupar, Robert M; Gardiner, Jack M; Oldre, Aaron G; Haun, William J; Chandler, Vicki L; Springer, Nathan M.

BMC Plant Biol ; 8: 33, 2008 Apr 10.

Artigo em Inglês | MEDLINE | ID: mdl-18402703

19.

CRISPR/Cas9 and TALENs generate heritable mutations for genes involved in small RNA processing of Glycine max and Medicago truncatula.

Curtin, Shaun J; Xiong, Yer; Michno, Jean-Michel; Campbell, Benjamin W; Stec, Adrian O; Cermák, Tomas; Starker, Colby; Voytas, Daniel F; Eamens, Andrew L; Stupar, Robert M.

Plant Biotechnol J ; 16(6): 1125-1137, 2018 06.

Artigo em Inglês | MEDLINE | ID: mdl-29087011

20.

Natural variation for alleles under epigenetic control by the maize chromomethylase zmet2.

Makarevitch, Irina; Stupar, Robert M; Iniguez, A Leonardo; Haun, William J; Barbazuk, W Brad; Kaeppler, Shawn M; Springer, Nathan M.

Genetics ; 177(2): 749-60, 2007 Oct.

Artigo em Inglês | MEDLINE | ID: mdl-17660570

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