Anthropogenic disturbance exacerbates resilience loss in the Amazon rainforests.

Uncovering the mechanisms that lead to Amazon forest resilience variations is crucial to predict the impact of future climatic and anthropogenic disturbances. Here, we apply a previously used empirical resilience metrics, lag-1 month temporal autocorrelation (TAC), to vegetation optical depth data in C-band (a good proxy of the whole canopy water content) in order to explore how forest resilience variations are impacted by human disturbances and environmental drivers in the Brazilian Amazon. We found that human disturbances significantly increase the risk of critical transitions, and that the median TAC value is ~2.4 times higher in human-disturbed forests than that in intact forests, suggesting a much lower resilience in disturbed forests. Additionally, human-disturbed forests are less resilient to land surface heat stress and atmospheric water stress than intact forests. Among human-disturbed forests, forests with a more closed and thicker canopy structure, which is linked to a higher forest cover and a lower disturbance fraction, are comparably more resilient. These results further emphasize the urgent need to limit deforestation and degradation through policy intervention to maintain the resilience of the Amazon rainforests.

Contemporary changes in phenotypic variation, and the potential consequences for eco-evolutionary dynamics.

Most studies assessing rates of phenotypic change focus on population mean trait values, whereas a largely overlooked additional component is changes in population trait variation. Theoretically, eco-evolutionary dynamics mediated by such changes in trait variation could be as important as those mediated by changes in trait means. To date, however, no study has comprehensively summarised how phenotypic variation is changing in contemporary populations. Here, we explore four questions using a large database: How do changes in trait variances compare to changes in trait means? Do different human disturbances have different effects on trait variance? Do different trait types have different effects on changes in trait variance? Do studies that established a genetic basis for trait change show different patterns from those that did not? We find that changes in variation are typically small; yet we also see some very large changes associated with particular disturbances or trait types. We close by interpreting and discussing the implications of our findings in the context of eco-evolutionary studies.

Spatial variation of soil seed banks along a gradient of anthropogenic disturbances in tropical forests on coral islands.

Poor regeneration of natural vegetation is a major factor contributing to the degradation of tropical coral islands. Soil seed banks (SSB) are important for maintaining the resilience of plant communities. However, the community characteristics and spatial distribution of SSBs and the controlling factors along human disturbance on coral islands are unclear. To fill this gap, we measured the community structure and spatial distributions of forest SSBs on three coral islands in the South China Sea, with varying degrees of human disturbance. The results showed that strong human disturbance increased the diversity, richness, and density of SSBs, as well as increased the richness of invasive species. With increased human disturbance, the heterogeneity pattern of SSBs spatial distribution changed from difference between forest east and west to forest center and edge. The similarity between the SSBs and above-ground vegetation also increased, and the distribution of invasive species extended from the edge to the central area of the forests, demonstrating that human disturbance limited the outward dispersal of seeds of resident species but increased the inward dispersal of seeds of invasive species. Interaction between soil properties, plant characteristics, and human disturbance explained 23-45% of the spatial variation of forest SSBs on the coral islands. However, human disturbance reduced the correlations of plant communities and spatial distribution of SSBs with soil factors (i.e., available phosphorus and total nitrogen) and increased the correlations of the community characteristics of SSB with landscape heterogeneity index, road distance, and shrub and litter cover. Resident seed dispersal on tropical coral islands might be enhanced by reducing building height, constructing buildings in down-wind locations, and preserving corridors that support animal movement among forest fragments.

Comparison of forest above-ground biomass from dynamic global vegetation models with spatially explicit remotely sensed observation-based estimates.

Gaps in our current understanding and quantification of biomass carbon stocks, particularly in tropics, lead to large uncertainty in future projections of the terrestrial carbon balance. We use the recently published GlobBiomass data set of forest above-ground biomass (AGB) density for the year 2010, obtained from multiple remote sensing and in situ observations at 100 m spatial resolution to evaluate AGB estimated by nine dynamic global vegetation models (DGVMs). The global total forest AGB of the nine DGVMs is 365 ± 66 Pg C, the spread corresponding to the standard deviation between models, compared to 275 Pg C with an uncertainty of ~13.5% from GlobBiomass. Model-data discrepancy in total forest AGB can be attributed to their discrepancies in the AGB density and/or forest area. While DGVMs represent the global spatial gradients of AGB density reasonably well, they only have modest ability to reproduce the regional spatial gradients of AGB density at scales below 1000 km. The 95th percentile of AGB density (AGB95 ) in tropics can be considered as the potential maximum of AGB density which can be reached for a given annual precipitation. GlobBiomass data show local deficits of AGB density compared to the AGB95 , particularly in transitional and/or wet regions in tropics. We hypothesize that local human disturbances cause more AGB density deficits from GlobBiomass than from DGVMs, which rarely represent human disturbances. We then analyse empirical relationships between AGB density deficits and forest cover changes, population density, burned areas and livestock density. Regression analysis indicated that more than 40% of the spatial variance of AGB density deficits in South America and Africa can be explained; in Southeast Asia, these factors explain only ~25%. This result suggests TRENDY v6 DGVMs tend to underestimate biomass loss from diverse and widespread anthropogenic disturbances, and as a result overestimate turnover time in AGB.

The effects of grazing and watering on ecosystem CO2 fluxes vary by community phenology.

Grazing profoundly influences vegetation and the subsequent carbon fluxes in various ecosystems. However, little effort has been made to explore the underlying mechanisms for phenological changes and their consequences on carbon fluxes at ecosystem level, especially under the coupled influences of human disturbances and climate change. Here, a manipulative experiment (2012-2013) was conducted to examine both the independent and interactive effects of grazing and watering on carbon fluxes across phenological phases in a desert steppe. Grazing advanced or delayed phenological timing, leading to a shortened green-up phase (GrP: 23.60 days) in 2013 and browning phase (BrP: 12.48 days) in 2012 from high grazing, and insignificant effects on the reproductive phase (ReP) in either year. High grazing significantly enhance carbon uptake, while light grazing reduce carbon uptake in ReP. Watering only delayed the browning time by 5.01 days in 2013, producing no significant effects on any phenophase. Watering promoted the net ecosystem exchange (NEE), ecosystem respiration (ER), and gross ecosystem productivity (GEP) only in the GrP. When calculating the yearly differences in phenophases and the corresponding carbon fluxes, we found that an extended GrP greatly enhanced NEE, but a prolonged ReP distinctly reduced it. The extended GrP also significantly promote GEP. Increases in growing season length appeared promoting ER, regardless of any phenophase. Additionally, the shifts in NEE appeared dependent of the variations in leaf area index (LAI).

Management strategy influences coral oxidative stress responses in a marine protected area in the Southwestern Atlantic.

Coral reefs are experiencing accelerated degradation due to global and local stressors. The understanding of how corals cope with these disturbances is urgent. We focused on elucidating antioxidant capacity responses of the Mussismilia harttii and Siderastrea sp. corals, in reefs with use management in a marine protected area. We tested whether the activity of antioxidant enzymes in healthy colonies is higher at multiple-use reefs than at no-take reef, and whether the activity of antioxidant enzymes is higher for bleached than for healthy Siderastrea sp. colonies. Lipid peroxidation and enzymatic activity found in bleached colonies evidence chronic stress and cellular damage not related to thermal anomalies. Chronic stress in healthy colonies was also found but responses differed among species, being higher at multiple use reefs, mainly for Siderastrea sp. We highlight the role of the local conservation actions in the integrity of coral physiology and reef resilience under global climate changes.

High vulnerability of coastal wetlands in Chile at multiple scales derived from climate change, urbanization, and exotic forest plantations.

Coastal wetlands are considered one of the most vulnerable ecosystems worldwide; the ecosystem services they provide and the conservation of their biodiversity are threatened. Despite the high ecological and socioenvironmental value of coastal wetlands, regional and national vulnerability assessments are scarce. In this study we aimed to assess the vulnerability of coastal wetlands in Chile from 18°S to 42°S (n = 757) under a multiscale approach that included drivers associated with climate change and land cover change. We assessed multiple drivers of vulnerability at three spatial scales (10 m, 100 m, and 500 m) by analyzing multiple remote sensing data (16 variables) on land cover change, wildfires, climatic variables, vegetation functional properties, water surface and importance for biodiversity. We constructed a multifactorial vulnerability index based on the variables analyzed, which provided a map of coastal wetland vulnerability. Then we explored the main drivers associated with the vulnerability of each coastal wetland by performing a Principal Components Analysis with Agglomerative Hierarchical Clustering, which allowed us to group coastal wetlands according to the drivers analyzed. We found that 42.6 ± 9.2 % of the coastal wetlands evaluated have high or very high vulnerability, with higher vulnerability at the 500 m scale (51.4 %). We identified four groups of coastal wetlands: two located in central Chile, mainly affected by climate change-associated drivers (41.9 ± 2.1 %), and one in central Chile which is affected by land cover change (52.8 ± 6.2 %); the latter has a lower vulnerability level. The most vulnerable coastal wetlands were located in central Chile. Our results present novel findings about the current vulnerability of coastal wetlands, which could be validated by governmental institutions in field campaigns. Finally, we believe that our methodological approach could be useful to generate similar assessments in other world zones.

The High-Elevation Peatlands of the Northern Andes, Colombia.

Andean peatlands are important carbon reservoirs for countries in the northern Andes and have a unique diversity. Peatland plant diversity is generally related to hydrology and water chemistry, and the response of the vegetation in tropical high-elevation peatlands to changes in elevation, climate, and disturbance is poorly understood. Here, we address the questions of what the main vegetation types of peat-forming vegetation in the northern Andes are, and how the different vegetation types are related to water chemistry and pH. We measured plant diversity in 121 peatlands. We identified a total of 264 species, including 124 bryophytes and 140 vascular plants. We differentiated five main vegetation types: cushion plants, Sphagnum, true mosses, sedges, and grasses. Cushion-dominated peatlands are restricted to elevations above 4000 m. Variation in peatland vegetation is mostly driven be elevation and water chemistry. Encroachment of sedges and Sphagnum sancto-josephense in disturbed sites was associated with a reduction in soil carbon. We conclude that peatland variation is driven first by elevation and climate followed by water chemistry and human disturbances. Sites with higher human disturbances had lower carbon content. Peat-forming vegetation in the northern Andes was unique to each site bringing challenges on how to better conserve them and the ecosystem services they offer.

Controls on diversity of core and indicative microbial subcommunities in Tibetan Plateau grassland soils.

Core subcommunity represents the less diversity but high abundance, while indicative subcommunity is highly diverse but low abundance in soils. The core subcommunity fundamentally maintains ecosystem stability, while the indicative plays important roles in vital ecosystem functions and is more sensitive to environmental change. However, their environmental driving factors and responses to human disturbances remain less defined. Herein, we explored the patterns of core and indicative soil microbes and their responses to animal grazing in dry grasslands across the Tibetan Plateau, using the Illumina sequencing of 16S rRNA gene. The results revealed that the core subcommunity diversity and richness were lower than the indicative in soils. The indicative subcommunity diversity exhibited substantially stronger correlations with nutrient-associated factors than the core diversity, including soil organic carbon, nitrogen, and plant biomass. The core and indicative microbial subcommunities both strongly varied with grassland ecosystems, while the latter was also significantly influenced by grazing. The variation partitioning analysis revealed that indicative microbial subcommunity was explained less by environmental factors than core subcommunity (34.5% vs 73.0%), but more influenced by grazing (2.6% vs 0.1%). Our findings demonstrated that the indicative microbes were particularly sensitive to soil nutrient-associated factors and human disturbances in alpine dry grasslands.

Microhabitat characteristics of the critically endangered big-headed turtle Platysternon megacephalum.

Understanding the microhabitat requirements of an animal is vital for ensuring the success of targeted conservation and microhabitat restoration measures. The big-headed turtle (Platysternon megacephalum) is a freshwater species that is distributed across Southeast Asia. Owing to the human threats posed by illegal pet trade and overharvesting for food and medicinal purposes, the species has undergone rapid decline. However, in Hainan, their microhabitat characteristics are still unknown, which is neither conducive to the conservation of the species nor to the establishment of the Hainan Tropical Rainforest National Park. This study examined the microhabitat characteristics of P. megacephalum using sample plot methods in the Diaoluo Mountain area of Hainan Tropical Rainforest National Park. Our results indicated that P. megacephalum prefers stream microhabitats with rocky substrates, several caves, and a high diversity of food sources. Microhabitat characteristics did not differ significantly between adults and juveniles. Our results suggest that protecting microhabitats and main food sources is important for the conservation of P. megacephalum. Our findings provide a reference for the protection of this species in Jianfeng Ridge, Yingge Ridge, and other areas in Hainan Tropical Rainforest National Park.

Quantifying marine traffic intensity in Northwest Greenland and the potential disturbance of two seabird colonies.

Marine traffic poses a growing threat to wildlife in the marine environment, including Arctic seabirds, which are exposed to high vessel densities when breeding in coastal areas. However, little is known about the magnitude of the problem. Here, we utilized underwater acoustic monitoring to quantify marine traffic and above-water disturbances at two thick-billed murre colonies in Greenland in 2016. We detected a total of 307 vessels, and only 4 % was known from automatic monitoring systems. Based on proximity, noise emission, and boating behavior, we classified 11 vessels as disturbing and an additional 12 as potentially disturbing for the seabirds. One colony facing population decline was located closest to the main boating route and experienced 2-5 times more disturbances than the other (increasing) colony, suggesting a negative impact of marine traffic. Our study shows that underwater acoustics can be a useful method to quantify above-water disturbances of seabird colonies.

A novel method for quantifying human disturbances: A case study of Huaihe River Basin, China.

Human disturbances have become the main factors affecting the ecological environment. Therefore, evaluating the intensity of human disturbances is of great significance for ensuring effective regional conservation and ecosystem management. In this study, we constructed a novel method to quantify human disturbances based on three components of human disturbances into three types, namely naturalness transformation, natural resource consumption, and pollutant emissions. These components were quantified using the land use naturalness index (LNI), resource consumption index (RCI), and pollution emission index (PEI). Based on these three indicators, the human disturbances index (HDI) was calculated to reflect the intensity of human disturbances. In addition, remote sensing (RS), geographic information system (GIS), and multisource data were combined in the HDI method, taking into account the temporal variability of input parameters to achieve more convenient and comprehensive dynamic monitoring and evaluation of human disturbances. The applicability and effectiveness of the HDI method were assessed in the Huaihe River Basin, China. The obtained results revealed an increase and decrease in the intensities of human disturbances in the Huaihe River Basin from 1990 to 2005 and from 2010 to 2018, respectively. In addition, areas with a high level of human disturbances in the 1990-2005 period were mainly concentrated in the agricultural and industrial areas, while those in the 2010-2018 period were mainly observed in urban areas. This change was mainly due to a decrease in the pollutant emission amounts from agricultural and industrial lands and a marked increase in resource consumption in urban areas. This study provides theoretical guidance for regional conservation in the Huaihe River Basin and a new method for quantifying human disturbances.

Habitat changes in the most important stopover sites for the endangered red-crowned crane in China: a large-scale study.

The red-crowned crane (Grus japonensis) is an endangered bird species that has been listed as one of the Class I National Key Protected Wild Animals of China. This study analyzed the habitat changes in the two most important stopover sites for red-crowned crane (Liao River Estuary and Yellow River Delta National Nature Reserves) from 2000 to 2015. The results showed that the landscape patterns of the important stopover sites of red-crowned crane changed obviously and the potential suitable habitat area (tidal flats and marshland) for the red-crowned crane decreased by 183.3 km2, while the area of human activities (including aquaculture waterbodies, farmland and artificial facilities) increased by 140.3 km2. Landscape fragmentation intensified, which could has negative impacts on the survival of the red-crowned crane during migration. A comparative study confirmed that the reduction in marshlands and increasing landscape fragmentation caused by human activities were the main threats in the Liao River Estuary National Nature Reserve, while human activities and natural factors (such as channel flow, rainfall, and sediment discharge) were the jointly driving factors for the reduction in suitable habitats for red-crowned cranes in the Yellow River Delta National Nature Reserve. We suggest there are some loopholes in the management of the two nature reserves, which need to be strengthened urgently in China.

Movement and dispersal of a habitat specialist in human-dominated landscapes: a case study of the red panda.

BACKGROUND: Habitat specialists living in human-dominated landscapes are likely to be affected by habitat fragmentation and human disturbances more than generalists. But there is a paucity of information on their response to such factors. We examined the effect of these factors on movement patterns of red pandas Ailurus fulgens, a habitat and diet specialist that inhabits the eastern Himalaya. METHODS: We equipped 10 red pandas (six females, four males) with GPS collars and monitored them from September 2019 to March 2020 in Ilam, eastern Nepal. We collected habitat and disturbance data over four seasons. We considered geophysical covariates, anthropogenic factors and habitat fragmentation metrics, and employed linear -mixed models and logistic regression to evaluate the effect of those variables on movement patterns. RESULTS: The median daily distance travelled by red pandas was 756 m. Males travelled nearly 1.5 times further than females (605 m). Males and sub-adults travelled more in the mating season while females showed no seasonal variation for their daily distance coverage. Red pandas were relatively more active during dawn and morning than the rest of the day, and they exhibited seasonal variation in distance coverage on the diel cycle. Both males and females appeared to be more active in the cub-rearing season, yet males were more active in the dawn in the birthing season. Two sub-adult females dispersed an average of 21 km starting their dispersal with the onset of the new moon following the winter solstice. The single subadult male did not disperse. Red pandas avoided roads, small-habitat patches and large unsuitable areas between habitat patches. Where connected habitat with high forest cover was scarce the animals moved more directly than when habitat was abundant. CONCLUSIONS: Our study indicates that this habitat specialist is vulnerable to human disturbances and habitat fragmentation. Habitat restoration through improving functional connectivity may be necessary to secure the long-term conservation of specialist species in a human-dominated landscape. Regulation of human activities should go in parallel to minimize disturbances during biologically crucial life phases. We recommend habitat zonation to limit human activities and avoid disturbances, especially livestock herding and road construction in core areas.

Spatial heterogeneous relationship between ecosystem services and human disturbances: A case study in Chuandong, China.

Goal 15 of the UN Sustainable Development Goals (SDGs) has highlighted the importance of maintaining a sustainable relation between ecosystem services and human activities. Ecosystem services are heterogeneous across landscapes. However, how human activities, which cause disturbances to ecosystem services, relate to such heterogeneity has not been well studied and thus necessarily constraining our ability to manage ecosystems sustainably. Based on land use/land cover data, this study addressed the research gap by running two inter-related analyses on the datasets of the study area, i.e., Chuandong, China. The first analysis involves identifying distinctive heterogeneous units of ecosystem service values using Getis-Ord Gi⁎. The second analysis involves measuring the impacts of human disturbances on ecosystem service values and their variations over every five years between 1990 and 2015, using linear regression and spatial regression models. The result of the first analysis identified heterogeneous ecosystem service units of hot-spots, cold-spots, and random areas. The hot-spots mainly clustered in relative inaccessibility land at higher terrain gradients in the east of the study area. The cold-spots overlapped extensively with built-up areas and farmland at lower terrain gradients in the west of the study area. Random areas distributed mainly in the middle part of the study area. This heterogeneity also existed temporally. Ecosystem service values in the study area decreased from 1990 to 2000 but reversed the trend after 2000. The result of the second analysis revealed that the impacts of hot-spots, cold-spots, and random areas on the relationship between ecosystem service values and human disturbances vary. Specifically, there was a negatively linear relationship between ecosystem service values and the integrated indicator of human disturbances, which was the strongest in random areas, followed by cold-spots and hot-spots. In addition, spatial spillover effect is explicit in the relationship between ecosystem service values and three specific factors of human disturbances, i.e., terrain index, population, and gross domestic product. They varied significantly between units: the terrain index had a positive externality on ecosystem service values with cold-spots and random areas but negative externality with hot-spots; population imposed a more negative externality on ecosystem service values when in proximity to random areas than cold-spots and hot-spots; the externality between gross domestic product and ecosystem service values exhibited irregular inverse 'U' shape, which was below the 'X-axis' in cold-spots but throughout the 'X-axis' in hot-spots and random areas. The findings of this study have potential policy implications in improving ecosystem sustainability through harmonizing the environment and human activities.

Urbanization erodes niche segregation in Darwin's finches.

Urbanization is influencing patterns of biological evolution in ways that are only beginning to be explored. One potential effect of urbanization is in modifying ecological resource distributions that underlie niche differences and that thus promote and maintain species diversification. Few studies have assessed such modifications, or their potential evolutionary consequences, in the context of ongoing adaptive radiation. We study this effect in Darwin's finches on the Galápagos Islands, by quantifying feeding preferences and diet niche partitioning across sites with different degrees of urbanization. We found higher finch density in urban sites and that feeding preferences and diets at urban sites skew heavily toward human food items. Furthermore, we show that finches at urban sites appear to be accustomed to the presence of people, compared with birds at sites with few people. In addition, we found that human behavior via the tendency to feed birds at non-urban but tourist sites is likely an important driver of finch preferences for human foods. Site differences in diet and feeding behavior have resulted in larger niche breadth within finch species and wider niche overlap between species at the urban sites. Both factors effectively minimize niche differences that would otherwise facilitate interspecies coexistence. These findings suggest that both human behavior and ongoing urbanization in Galápagos are starting to erode ecological differences that promote and maintain adaptive radiation in Darwin's finches. Smoothing of adaptive landscapes underlying diversification represents a potentially important yet underappreciated consequence of urbanization. Overall, our findings accentuate the fragility of the initial stages of adaptive radiation in Darwin's finches and raise concerns about the fate of the Galápagos ecosystems in the face of increasing urbanization.

Factors affecting the spatial distribution and breeding habitat of an insular cliff-nesting raptor community.

The specific spatial distribution and habitat association-strongly influenced by environmental factors or competitive interactions-are major issues in ecology and conservation. We located and georeferenced nesting sites of five cliff-nesting raptors (Egyptian vulture Neophron percnopterus [a locally extinct species], common buzzard Buteo buteo, osprey Pandion haliaetus, common kestrel Falco tinnunculus, Barbary falcon Falco peregrinus pelegrinoides), and common raven Corvus corax on one of the most biodiverse hotspot within the Canary Islands (Teno, Tenerife). We used generalized linear models to evaluate the factors affecting abundance, richness, and intra- and interspecific interactions. Raptor abundance increased with slope, shrub-covered area, and habitat diversity, and decreased with altitude, and forested and grassed areas. Richness increased with slope and decreased with altitude. Threatened species (osprey, Barbary falcon, and raven) occupied cliffs farther away from houses and roads, and more rugged areas than the non-threatened species. The models suggested that the probability of cliff occupation by buzzards, falcons, and ravens depended only on inter-specific interactions. Buzzard occupation increased with the distance to the nearest raven and kestrel nests, whereas falcons and ravens seek proximity to each other. Teno holds between 75% and 100% of the insular breeding populations of the most endangered species (osprey and raven), indicating the high conservation value of this area. Our study suggests that the preservation of rugged terrains and areas of low human pressure are key factors for raptor conservation and provide basic knowledge on the community structure and habitat associations to develop appropriated management actions for these fragile island populations.

Recent origin of a large part of the forest cover in the Gabon coastal area based on stable carbon isotope data.

Variations in the natural 13C abundance of soil organic matter (SOM) at different depths combined with SOM radiocarbon dating were used to reconstruct the history of the forest-savanna successions over the last millennium in the Gabon coastal area. A chronosequence was established by comparing the δ13C profiles and the radiocarbon dating of a Gabon savanna with those of a Congolese savanna where the palaeoenvironments are already well known. The palaeoclimatic histories of the two savannas were shown to be strictly identical. The whole Gabon coastal area may well have been forested during the early Holocene, until about 4,000 years ago. The forest fragmented after this initial expansion. Savanna appeared circa 3,000 years ago but the forest did not disappear totally. A new forest transgression started 500-1,000 years ago and expanded over the open areas previously created or enlarged. The marked savanisation and the subsequent and currently ongoing forest expansion explain both the present forest-savanna mosaic and the abundance of secondary species such as Aucoumea klaineana in the coastal forest.Anthropogenic activities over the past decades and centuries have induced local fluctuations in the forest cover, superimposed on the climatic forest-savanna dynamic. This study also confirms that the monospecific, even-aged A. klaineana stands present in the area became established on abandoned cultivation clearings.