EBP-Colombia and the bioeconomy: Genomics in the service of biodiversity conservation and sustainable development.

The 2016 Peace Agreement has increased access to Colombia's unique ecosystems, which remain understudied and increasingly under threat. The Colombian government has recently announced its National Bioeconomic Strategy (NBS), founded on the sustainable characterization, management, and conservation of the nation's biodiversity as a means to achieve sustainability and peace. Molecular tools will accelerate such endeavors, but capacity remains limited in Colombia. The Earth Biogenome Project's (EBP) objective is to characterize the genomes of all eukaryotic life on Earth through networks of partner institutions focused on sequencing either specific taxa or eukaryotic communities at regional or national scales. Colombia's immense biodiversity and emerging network of stakeholders have inspired the creation of the national partnership "EBP-Colombia." Here, we discuss how this Colombian-driven collaboration between government, academia, and the private sector is integrating research with sustainable, environmentally focused strategies to develop Colombia's postconflict bioeconomy and conserve biological and cultural diversity. EBP-Colombia will accelerate the uptake of technology and promote partnership and exchange of knowledge among Colombian stakeholders and the EBP's global network of experts; assist with conservation strategies to preserve Colombia's vast biological wealth; and promote innovative approaches among public and private institutions in sectors such as agriculture, tourism, recycling, and medicine. EBP-Colombia can thus support Colombia's NBS with the objective of sustainable and inclusive development to address the many social, environmental, and economic challenges, including conflict, inequality, poverty, and low agricultural productivity, and so, offer an alternative model for economic development that similarly placed countries can adopt.

Food web collapse and regime shift following goldfish introduction in permanent ponds.

In a global context of invasive alien species (IAS), native predators are often eradicated by functionally different IAS, which may induce complex cascading consequences on ecosystem functioning because of the key role predators play in structuring communities and stabilizing food webs. In permanent ponds, the most abundant freshwater systems on Earth, global human-mediated introductions of alien omnivores such as the pet trade goldfish are driving broad-scale patterns of native predators' exclusion, but cascading consequences on food web structure and functioning are critically understudied. We compared food webs of naturally fishless ponds versus ponds where dominant native predators (newts) had been extirpated by invasive goldfish within the last decade. Integrating community-wide isotopic, taxonomic and functional traits approaches, our study reveals that pond food webs collapsed in both vertical and horizontal dimensions following goldfish introduction and the associated exclusion of native predators. Consumer taxonomic diversity was drastically reduced, essentially deprived of amphibians as well as predatory and mobile macroinvertebrates to the profit of burrowing, lower trophic level consumers (detritivores). Changes in community structure and function underlined a regime shift from a macrophyte-dominated system mainly characterized by benthic primary production (periphyton), to a macrophyte-depleted state of ponds hosting communities mainly associated with phytoplankton primary production and detritus accumulation, with higher tolerance to eutrophication and low dissolved oxygen concentration. Results underline major impacts of widely introduced omnivores such as the goldfish on the functioning of pond ecosystems with potentially dramatic consequences on the key ecosystem services they deliver, such as global biodiversity support or water quality improvement. They also shed light on the key role of submerged aquatic vegetation in supporting diverse communities and complex food webs in shallow lentic systems and call for urgent consideration of threats posed by IAS on ponds' ecosystems by managers and policymakers.

Existing levels of biodiversity and river location may determine changes from small hydropower developments.

Global ecosystems are facing anthropogenic threats that affect their ecological functions and biodiversity. However, we still lack an understanding of how biodiversity can mediate the responses of ecosystems or communities to human disturbance across spatial gradients. Here, we examined how existing, spatial patterns of biodiversity influence the ecological effects of small hydropower plants (SHPs) on macroinvertebrates in river ecosystems. This study found that levels of biodiversity (e.g., number of species) can influence the degrees of its alterations by SHPs occurring along elevational gradients. The results of the study reveal that the construction of SHPs has various effects on biodiversity. For example, low-altitude areas with low biodiversity (species richness less than 12) showed a small increase in biodiversity compared to high-altitude areas (species richness more than 12) under SHP disturbances. The increases in the effective habitat area of the river segment could be a driver of the enhanced biodiversity in response to SHP effects. Changes in the numerically dominant species contributed to the overall level of community variation from disturbances. Location-specific strategies may mitigate the effects of SHPs and perhaps other disturbances.

Elephants in the Room - Analyzing Local Discourses for Sustainable Management of Bannerghatta National Park, South India.

Landscape governance challenges, particularly in peri-urban contexts like the Bannerghatta National Park (BNP) region in South India, exemplify 'wicked' problems due to their inherent complexities. These challenges arise from a mix of conflicting interests, policy ambiguities, and sociocultural dynamics, which often blur the definition of problems and hinder effective solutions. Despite apparent options for resolution, stakeholder disagreements and deep uncertainties about implementation strategies complicate governance. This study, therefore, has two broad objectives. The first objective is to analyze the local discourses surrounding planned policy interventions around the BNP region in South India. Based on the findings, the second objective is to draw insights for sustainable natural resource governance research and practice. We applied Q-methodology to understand the discourses that underpin various conflicts in the rapidly urbanizing elephant corridor at BNP. We elicited information on how various local actors frame solutions to current collective action challenges in the BNP landscape and their perspectives on the proposed eco-sensitive zone notification, as well as the functioning of current policy interventions concerning conservation and development. The study uncovers the micropolitics and power regimes underpinning various natural resource governance challenges and demonstrates the utility of the Q-methodology in bringing diverse perspectives together in response to 'wicked' governance challenges.

A noninvasive eDNA tool for detecting sea lamprey larvae in river sediments: Analytical validation and field testing in a low-abundance ecosystem.

Anthropogenic activities are increasingly threatening aquatic biodiversity, especially anadromous species. Monitoring and conservation measures are thus required to protect, maintain and restore imperilled populations. While many species can be surveyed using traditional capture and visual census techniques, species that use riverine habitats in a less conspicuous manner, such as sea lamprey Petromyzon marinus, can be more challenging to monitor. Sea lamprey larvae (ammocoetes) can spend several years in freshwater burrowed within soft sediments, inhibiting their detection and assessment. Here, we present a qPCR assay based on the detection of environmental DNA (eDNA) to identify the presence of ammocoetes burrowed in the sediment. We present an extensively validated method that ensured both species-specificity of the assay as well as the capacity to detect ammocoetes when abundances are low. Experiments on burrowing activity suggested that most of the DNA released into the sediment occurs during burrowing. Overall, we demonstrate this new molecular-based tool is an efficient and effective complement to traditional monitoring activities targeting larval stages of sea lampreys.

Evolutionary principles and genetic considerations for guiding conservation interventions under climate change.

Impacts of climate change are apparent in natural systems around the world. Many species are and will continue to struggle to persist in their current location as their preferred environment changes. Traditional conservation efforts aiming to prevent local extinctions have focused on two aspects that theoretically enhance genetic diversity-population connectivity and population size-through 'passive interventions' (such as protected areas and connectivity corridors). However, the exceptionally rapid loss of biodiversity that we are experiencing as result of anthropogenic climate change has shifted conservation approaches to more 'active interventions' (such as rewilding, assisted gene flow, assisted evolution, artificial selection, genetic engineering). We integrate genetic/genomic approaches into an evolutionary biology framework in order to discuss with scientists, conservation managers and decision makers about the opportunities and risks of interventions that need careful consideration in order to avoid unwanted evolutionary outcomes.

Wildlife collection for scientific purposes.

Illegal transfer of wildlife has 2 main purposes: trade and scientific research. Trade is the most common, whereas scientific research is much less common and unprofitable, yet still important. Biopiracy in science is often neglected despite that many researchers encounter it during their careers. The use of illegally acquired specimens is detected in different research fields, from scientists bioprospecting for new pharmacological substances, to taxonomists working on natural history collections, to researchers working in zoos, aquariums, and botanical gardens. The practice can be due to a lack of knowledge about the permit requirements in different countries or, probably most often, to the generally high level of bureaucracy associated with rule compliance. Significant regulatory filters to avoid biopiracy can be provided by different stakeholders. Natural history collection hosts should adopt strict codes of conduct; editors of scientific publications should require authors to declare that all studied specimens were acquired legally and to cite museum catalog numbers as guarantee of best practices. Scientific societies should actively encourage publication in peer-reviewed journals of work in which specimens collected from the wild were used. The International Commission on Zoological Nomenclature could require newly designated types based on recently collected specimens to be accompanied by statements of deposition in recognized scientific or educational institutions. We also propose the creation of an online platform that gathers information about environmental regulations and permits required for scientific activities in different countries and respective responsible governmental agencies and the simplification of the bureaucracy related to regulating scientific activities. This would make regulations more agile and easier to comply with. The global biodiversity crisis means data need to be collected ever faster, but biopiracy is not the answer and undermines the credibility of science and researchers. It is critical to find a modus vivendi that promotes compliance with regulations and scientific progress.

Recolección de Fauna con Motivos Científicos Resumen El traslado ilegal de fauna tiene dos objetivos principales: el mercado y la investigación científica. El mercado es el más común, a la vez que la investigación científica es mucho menos común y poco rentable, pero de igual manera importante. La biopiratería en la ciencia comúnmente se ignora a pesar de que muchos investigadores se encuentran con ella a lo largo de sus carreras. El uso de especímenes adquiridos ilegalmente está detectado en diferentes campos de investigación, desde los científicos que realizan bio-exploraciones en búsqueda de nuevas sustancias farmacológicas, pasando por los taxónomos que trabajan en las colecciones de historia natural, hasta los investigadores que trabajan en zoológicos, acuarios y jardines botánicos. Esta práctica puede deberse a la falta de conocimiento sobre los requerimientos de los permisos en diferentes países o, probablemente con mayor frecuencia, a la alta cantidad de burocracia asociada con el seguimiento de las reglas. Los diferentes actores pueden proporcionar filtros regulatorios importantes para evitar la biopiratería. Los dueños de las colecciones de historia natural deberían adoptar códigos estrictos de conducta; los editores de las publicaciones científicas deberían exigirle a los autores que declaren que todos los especímenes estudiados fueron adquiridos legalmente y también que citen el número de catálogo del espécimen como garantías de mejores prácticas. Las sociedades científicas deberían promover activamente la publicación en revistas revisadas por pares de los trabajos en los que se usaron especímenes recolectados en su hábitat natural. La Comisión Internacional sobre la Nomenclatura Zoológica podría requerir que la designación reciente de tipos basada en especímenes recolectados recientemente esté acompañada por declaraciones de deposición en instituciones científicas o educativas reconocidas. También proponemos la creación de una plataforma en línea que recopile la información sobre las regulaciones ambientales y los permisos requeridos para la actividad científica en diferentes países, así como las agencias gubernamentales responsables y la simplificación de la burocracia relacionada con la regulación de las actividades científicas. Ésto haría que las regulaciones sean más ágiles y su cumplimiento más fácil. La crisis mundial de biodiversidad implica que los datos necesitan ser recolectados con mayor velocidad que nunca, pero la biopiratería no es la respuesta, además de que desvirtúa la credibilidad de la ciencia y de los investigadores. Es muy importante que encontremos un modus vivendi que promueva un acuerdo entre las reglas y el progreso científico.

Will the COVID-19 outbreak be a turning point for China's wildlife protection: New developments and challenges of wildlife conservation in China.

On 24 February 2020, at the brink of the global coronavirus disease 2019 (COVID-19) pandemic, the Chinese legislature adopted a decision to ban all terrestrial wildlife for food consumption. This decision set the tone for the revision of the Wildlife Protection Law (WPL), planned for release in late 2020. Both the terrestrial wildlife ban and revised WPL have the potential to greatly reduce consumption of wildlife and aid in prevention of future zoonotic disease outbreaks. The government still faces severe challenges in reducing wildlife use in traditional medicine, strengthening habitat and ecosystem conservation, committing to long-term WPL enforcement, and promoting community education and institutional reforms. However, recent progress in establishing a stricter ban on wildlife consumption, consolidating fragmented protected areas, and increased openness to public oversight are promising developments. While it is clear that global pandemics like COVID-19 can cause massive human suffering and disruption of economies; governments can no longer allow business as usual for the wildlife industry, regardless of the monetary or cultural values it brings. Here we discuss the latest development and limitations of the current wildlife legislation in China and the recommendations for improving Chinese wildlife conservation to better protect biodiversity and reduce risks of spreading zoonotic diseases to humans.

Achieving Minimum-Time Biological Conservation and Pest Management for Additional Food provided Predator-Prey Systems involving Inhibitory Effect: A Qualitative Investigation.

Theoretical and experimental studies on prey-predator systems where predator is supplied with alternate sources of food have received significant attention over the years due to their relevance in achieving biological conservation and biological control. Some of the outcomes of these studies suggest that with appropriate quality and quantity of additional food, the system can be steered towards any desired state eventually with time. One of the limitations of previous studies is that the desired state is reached asymptotically, which makes the outcomes not easily applicable in practical scenarios. To overcome this limitation, in this work, we formulate and study optimal control problems to achieve the desired outcomes in minimum (finite) time. We consider two different models of additional food provided prey-predator systems involving Holling type IV functional response (with inhibitory effect of prey). In the first scenario, additional food is incorporated implicitly into the predator's functional response with a possibility of achieving biological conservation through co-existence of species and biological control by maintaining prey at a level that is least harmful to the system. In the second, the effect of additional food is incorporated explicitly into the predator's compartment with the goal of pest management by maintaining prey density at a very minimal damaging level. For both cases, appropriate optimal control strategies are derived and the theoretical findings are illustrated by numerical simulations. We also discuss the ecological significance of the theoretical findings for both models.

Additional Food Supplements as a Tool for Biological Conservation of Biosystems in the Presence of Inhibitory Effect of the Prey.

Provision of additional food supplements for the purpose of biological conservation has been widely researched both theoretically and experimentally. The study of these biosystems is usually done using predator-prey models. In this paper, we consider an additional food provided predator-prey system in the presence of the inhibitory effect of the prey. This model is analyzed in the control parameter space using the control parameters, quality and quantity of additional food. The findings suggest that with appropriate choice of additional food to predators, the biosystem can be controlled and steered to a desirable state. It is also possible to eliminate either of the interacting species. The vital role of the quality and quantity of the additional food in the system dynamics cautions the eco manager on the choice of the additional food for realizing the goal in the biological conservation programme.

Additional food supplements as a tool for biological conservation of predator-prey systems involving type III functional response: A qualitative and quantitative investigation.

Provision of additional food supplements for the purpose of biological conservation in ecosystems has of late been intensely researched by agriculturalists, biologists and mathematicians. The study of these ecosystems is usually done using the predator-prey systems. In these ecological studies it has been observed that the quality and quantity of additional food supplements provided play a crucial role in the growth of the predators and thereby influence the eventual state of the ecosystem. Also, in some of the ecological experiments it has been observed that predators exhibit non-optimal foraging behaviour in the presence of additional food. Findings also show that the predators exhibit a Holling type II response towards a target prey with predation highest at low prey densities. The results suggest that predation by predators is unlikely to stabilize low density prey populations. This can be attributed to the prey detectability independent nature of the type II response. In nature, sigmoidal functional responses such as the Holling type III response, have been documented in organisms from various taxa. In this kind of type III response the predators exhibit low detectability nature at low prey densities. Due to this the ecosystem tends to get stabilized at low prey densities avoiding the oscillations encountered in type II response. Motivated by these studies, in this paper, we consider a predator-prey system provided with additional food where the predator is assumed to exhibit Holling type III functional response towards the available food and the additional food supplements provided are assumed to be of constant density. We also assume that the predators are not optimal foragers. The model is analyzed in the control parameter space using the control parameters, quality and quantity of additional food. It is observed that the system exhibits apparent competition only when the predators are provided with high quality additional food supplements. Further, it has been shown that the ecosystem tends to get stabilized at low prey densities and the system can be steered to a desired state by a suitable choice of additional food supplements. Provision of low quality additional food supplements can result in completely opposite results to the expected ones.

Biodiversity influences plant productivity through niche-efficiency.

The loss of biodiversity is threatening ecosystem productivity and services worldwide, spurring efforts to quantify its effects on the functioning of natural ecosystems. Previous research has focused on the positive role of biodiversity on resource acquisition (i.e., niche complementarity), but a lack of study on resource utilization efficiency, a link between resource and productivity, has rendered it difficult to quantify the biodiversity-ecosystem functioning relationship. Here we demonstrate that biodiversity loss reduces plant productivity, other things held constant, through theory, empirical evidence, and simulations under gradually relaxed assumptions. We developed a theoretical model named niche-efficiency to integrate niche complementarity and a heretofore-ignored mechanism of diminishing marginal productivity in quantifying the effects of biodiversity loss on plant productivity. Based on niche-efficiency, we created a relative productivity metric and a productivity impact index (PII) to assist in biological conservation and resource management. Relative productivity provides a standardized measure of the influence of biodiversity on individual productivity, and PII is a functionally based taxonomic index to assess individual species' inherent value in maintaining current ecosystem productivity. Empirical evidence from the Alaska boreal forest suggests that every 1% reduction in overall plant diversity could render an average of 0.23% decline in individual tree productivity. Out of the 283 plant species of the region, we found that large woody plants generally have greater PII values than other species. This theoretical model would facilitate the integration of biological conservation in the international campaign against several pressing global issues involving energy use, climate change, and poverty.

Introductions do not compensate for functional and phylogenetic losses following extinctions in insular bird assemblages.

The ratio of species extinctions to introductions has been comparable for many insular assemblages, suggesting that introductions could have 'compensated' for extinctions. However, the capacity for introduced species to replace ecological roles and evolutionary history lost following extinction is unclear. We investigated changes in bird functional and phylogenetic diversity in the wake of extinctions and introductions across a sample of 32 islands worldwide. We found that extinct and introduced species have comparable functional and phylogenetic alpha diversity. However, this was distributed at different positions in functional space and in the phylogeny, indicating a 'false compensation'. Introduced and extinct species did not have equivalent functional roles nor belong to similar lineages. This makes it unlikely that novel island biotas composed of introduced taxa will be able to maintain ecological roles and represent the evolutionary histories of pre-disturbance assemblages and highlights the importance of evaluating changes in alpha and beta diversity concurrently.

Effects of productivity on biodiversity in forest ecosystems across the United States and China.

In the global campaign against biodiversity loss in forest ecosystems, land managers need to know the status of forest biodiversity, but practical guidelines for conserving biodiversity in forest management are lacking. A major obstacle is the incomplete understanding of the relationship between site primary productivity and plant diversity, due to insufficient ecosystem-wide data, especially for taxonomically and structurally diverse forest ecosystems. We investigated the effects of site productivity (the site's inherent capacity to grow timber) on tree species richness across 19 types of forest ecosystems in North America and China through 3 ground-sourced forest inventory data sets (U.S. Forest Inventory and Analysis, Cooperative Alaska Forest Inventory, and Chinese Forest Management Planning Inventory). All forest types conformed to a consistent and highly significant (P < 0.001) hump-shaped unimodal relationship, of which the generalized coefficients of determination averaged 20.5% over all the forest types. That is, tree species richness first increased as productivity increased at a progressively slower rate, and, after reaching a maximum, richness started to decline. Our consistent findings suggest that forests of high productivity would sustain few species because they consist mostly of flat homogeneous areas lacking an environmental gradient along which a diversity of species with different habitats can coexist. The consistency of the productivity-biodiversity relationship among the 3 data sets we examined makes it possible to quantify the expected tree species richness that a forest stand is capable of sustaining, and a comparison between the actual species richness and the sustainable values can be useful in prioritizing conservation efforts.

Weed Role for Pollinator in the Agroecosystem: Plant-Insect Interactions and Agronomic Strategies for Biodiversity Conservation.

The growing interest in safeguarding agroecosystem biodiversity has led to interest in studying ecological interactions among the various organisms present within the agroecosystem. Indeed, mutualisms between weeds and pollinators are of crucial importance as they influence the respective survival dynamics. In this review, the mutualistic role of flower visitors and the possible (often predominant) abiotic alternatives to insect pollination (self- and wind-pollination) are investigated. Mutualistic relations are discussed in terms of reward (pollen and/or nectar) and attractiveness (color, shape, scent, nectar quality and quantity), analyzing whether and to what extent typical weeds are linked to pollinators by rigid (specialization) or flexible (generalization) mutualistic relations. The entomofauna involved is composed mainly of solitary and social bees, bumblebees, Diptera, and Lepidoptera. While some of these pollinators are polylectic, others are oligolectic, depending on the shape of their mouthparts, which can be suited to explore the flower corollas as function of their depths. Consequently, the persistence dynamics of weed species show more successful survival in plants that are basically (occasional insect pollination) or totally (self and/or wind pollination) unspecialized in mutualistic relations. However, even weed species with typical abiotic pollination are at times visited during periods such as late summer, in which plants with more abundant rewards are insufficiently present or completely absent. Many typically insect-pollinated weeds can represent a valid indicator of the ecological sustainability of crop management techniques, as their survival dynamics are closely dependent on the biodiversity of the surrounding entomofauna. In particular, the presence of plant communities of species pollinated above all by butterflies (e.g., several Caryophyllaceae) gives evidence to the ecological compatibility of the previous agronomic management, in the sense that butterflies require certain weed species for oviposition and subsequent larva rearing and, therefore, provide further evidence of plant biodiversity in the environment.

Comparative transcriptomics revealed the ecological trap effect of linearly polarized light on Oratosquilla oratoria.

Although polarized light can assist many animals in performing special visual tasks, current polarized light pollution (PLP) caused by urban construction has been shown to induce maladaptive behaviors of PL-sensitive animals and change ecological interactions. However, the underlying mechanisms remain unclear. Our previous work hypothesized that linearly polarized light (LPL) is an ecological trap for Oratosquilla oratoria, a common Stomatopoda species in the China Sea. Here we explored the underlying negative effects of artificially LPL on O. oratoria based on comparative transcriptomics. We identified 3616 differentially expressed genes (DEGs) in O. oratoria compound eyes continuous exposed to natural light (NL) and LPL scenarios. In comparison with the NL scenario, a total of 1972 up- and 1644 down- regulated genes were obtained from the O. oratoria compound eyes under LPL scenario, respectively. Furthermore, we performed functional annotation of those DEGs described above and identified 65 DEGs related to phototransduction, reproduction, immunity, and synapse. Based on the functional information, we suspected that continuous LPL exposure could block the light transmission, disrupt the reproductive process, and lead to the progressive failure of the immune response of O. oratoria. In conclusion, this study is the first to systematically describe the negative effects of artificial LPL exposure on O. oratoria at the genetic level, and it can improve the biological conservation theory behind PLP.

The impact of chronic and acute problems on sea turtles: The consequences of the oil spill and ingestion of anthropogenic debris on the tropical semi-arid coast of Ceará, Brazil.

Sea turtle mortality is often related to materials that reach the coast from different anthropic activities worldwide. This study aimed to investigate whether sea turtle mortality was related to older marine problems, such as solid waste, or one of the largest oil spill accidents on the Brazilian coast, that occurred in 2019. We posed three questions: 1) Are there solid residues in the digestive tract samples, and which typology is the most abundant? 2) Can meso­ and macro-waste marine pollutants cause mortality? 3) Is the dark material found really oil? A total of 25 gastrointestinal content (GC) samples were obtained, of which 22 ingested waste of anthropogenic origin and 18 were necropsied. These 22 samples were obtained during or after the 2019 oil spill, of which 17 specimens were affected, making it possible to suggest oil ingestion with the cause of death in the animals that could be necropsied. Macroscopic data showed that the most abundant solid waste was plastic (76.05 %), followed by fabrics (12.18 %) and oil-like materials. However, chemical data confirmed only three specimens with oil levels ranging from remnants to high. It was possible to infer possible causes of death in 16 of the total 18 necropsied cases: Most deaths were due to respiratory arrest (62.5 %), followed by pulmonary edema (12.5 %), cachexia syndrome (12.5 %), circulatory shock (6.25 %), and head trauma (6.25 %), which may have been caused by contact with solid waste, oil, or both. The study showed that not all dark material found in the GCs of turtles killed in oiled areas is truly oil, and in this sense, a chemical analysis step to prove the evidence of oil must be added to international protocols.

Automatedly identify dryland threatened species at large scale by using deep learning.

Dryland biodiversity is decreasing at an alarming rate. Advanced intelligent tools are urgently needed to rapidly, automatedly, and precisely detect dryland threatened species on a large scale for biological conservation. Here, we explored the performance of three deep convolutional neural networks (Deeplabv3+, Unet, and Pspnet models) on the intelligent recognition of rare species based on high-resolution (0.3 m) satellite images taken by an unmanned aerial vehicle (UAV). We focused on a threatened species, Populus euphratica, in the Tarim River Basin (China), where there has been a severe population decline in the 1970s and restoration has been carried out since 2000. The testing results showed that Unet outperforms Deeplabv3+ and Pspnet when the training samples are lower, while Deeplabv3+ performs best as the dataset increases. Overall, when training samples are 80, Deeplabv3+ had the best overall performance for Populus euphratica identification, with mean pixel accuracy (MPA) between 87.31 % and 90.2 %, which, on average is 3.74 % and 11.29 % higher than Unet and Pspnet, respectively. Deeplabv3+ can accurately detect the boundaries of Populus euphratica even in areas of dense vegetation, with lower identification uncertainty for each pixel than other models. This study developed a UAV imagery-based identification framework using deep learning with high resolution in large-scale regions. This approach can accurately capture the variation in dryland threatened species, especially those in inaccessible areas, thereby fostering rapid and efficient conservation actions.

Temporal and spatial patterns of small vertebrate roadkill in a supercity of eastern China.

An assessment of animal roadkill can help develop road mitigation measures. This article is the first to report data on animal-vehicle collisions (AVCs) in Nanjing, a supercity in eastern China. The research was conducted on a 224.27 km stretch of nine roads in Nanjing. In the period, between November 2020 and October 2021, 26 fortnightly monitoring missions were conducted to gather roadkill carcasses so that we could analyze their temporal and spatial distribution patterns. A total of 259 carcasses were collected, comprising 22 different species, of which 46.42% were mammals and 48.81% were birds. Cats and dogs are the most roadkill mammals, and blackbirds and sparrows are the most roadkill birds. The temporal analysis demonstrated that the peak of vertebrate roadkill occurred from May to July. Spatial analysis showed that the distribution patterns of vertebrate roadkill on different roads varied with a generally non-random distribution and aggregation. By mapping accidents using kernel density analysis, we were able to pinpoint locations that were at high risk for roadkill. Due to the fortnightly survey, our results would underestimate the casualties, even if, our study suggests that the problem of car accidents due to animals should be a cause for concern, and the results of the analysis of temporal and spatial patterns contribute to the establishment of mitigation measures.

Drivers of species knowledge across the tree of life.

Knowledge of biodiversity is unevenly distributed across the Tree of Life. In the long run, such disparity in awareness unbalances our understanding of life on Earth, influencing policy decisions and the allocation of research and conservation funding. We investigated how humans accumulate knowledge of biodiversity by searching for consistent relationships between scientific (number of publications) and societal (number of views in Wikipedia) interest, and species-level morphological, ecological, and sociocultural factors. Across a random selection of 3019 species spanning 29 Phyla/Divisions, we show that sociocultural factors are the most important correlates of scientific and societal interest in biodiversity, including the fact that a species is useful or harmful to humans, has a common name, and is listed in the International Union for Conservation of Nature Red List. Furthermore, large-bodied, broadly distributed, and taxonomically unique species receive more scientific and societal attention, whereas colorfulness and phylogenetic proximity to humans correlate exclusively with societal attention. These results highlight a favoritism toward limited branches of the Tree of Life, and that scientific and societal priorities in biodiversity research broadly align. This suggests that we may be missing out on key species in our research and conservation agenda simply because they are not on our cultural radar.