Hot water mobilizes the metabolism of energy, soluble sugar, cell wall, and phenolics to cope with chilling injury in postharvest snap beans.

BACKGROUND: Snap beans (Phaseoulus vulgaris L.) are very sensitive to low temperature during postharvest storage. Pitting, rusting, and water-soaked patches are typical chilling injury (CI) symptoms of snap beans. The appearance of these symptoms reduces the storage quality of snap beans. The energy, soluble carbohydrates, cell wall, and phenolic metabolisms of refrigerated snap beans and their relationship to CI treated with 35 °C hot water (HW) were investigated. RESULTS: HW treatment reduced CI index and electrolyte leakage and increased the contents of soluble solids, titratable acidity, and chlorophyll. HW treatment maintained higher activities of proton ATPase, calcium ATPase, and cytochrome c oxidase, which resulted in the accumulation of more adenosine triphosphate, adenosine diphosphate, and energy charge. The accumulation of soluble sugar induced by HW treatment was correlated with the stimulation of sucrose phosphate synthase and sucrose synthase. The prevention effect of HW treatment on the degradation of cell wall components was related to the inhibition of pectin methylesterase and cellulase. HW-induced phenol accumulation is associated with an increase in shikimate dehydrogenase, phenylalanine ammonia lyase, cinnamate-4-hydroxylase, and 4-coumarine-coenzyme A ligase, as well as a decrease in polyphenol oxidase. CONCLUSION: The alleviating effect of HW on CI is due to its regulation of energy, soluble sugar, cell wall, and phenolic metabolism. Therefore, HW treatment may be an effective means to reduce CI of snap beans. © 2024 Society of Chemical Industry.

Transcriptome analysis of the hepatopancreas in Penaeus vannamei under experimental infection with Enterocytozoon hepatopenaei (EHP).

Enterocytozoon hepatopenaei (EHP) is a specialized intracellular parasite that mainly resides in the hepatopancreas of shrimp, causing significant growth retardation in shrimp. In this study, Penaeus vannamei was infected with EHP through an artificial challenge experiment, and the different genes and pathways in the hepatopancreas between EHP-infected and healthy shrimp were analyzed by transcriptome sequencing. The results showed that a total of 240 significantly differentially expressed genes were obtained, including 99 up-regulated genes and 141 down-regulated genes. Immune-related genes such as Astakine, lysozyme, NACHT, LRR, and PYD domains-containing protein 3 (NLRP3), and macrophage mannose receptor 1-like (MMR) were up-regulated, and the expression levels of lipid metabolism-related genes pancreatic lipase-related protein 2 (PLRP2), lysosomal acid lipase (LIPA), and adiponectin receptor protein (AdipoR) were also increased. However, several genes were down-regulated in carbohydrate and protein metabolism, such as glyceraldehyde-3-phosphate dehydrogenase (GAPDH), trypsin-1, and delta-1-pyrroline-5-carboxylate synthase (ALDH18A1). The results suggested that EHP infection of shrimps could significantly activate the immune system, but the energy and material metabolism processes were disturbed. This study identified a substantial number of genes and pathways associated with EHP infection, providing a valuable resource for revealing the molecular mechanism of growth retardation in shrimp.

Relationship between Changes in Intestinal Microorganisms and Effect of High Temperature on the Growth and Development of Bombyx mori Larvae.

Temperature is an important environmental factor affecting the growth and development of silkworm (Bombyx mori). To analyze the effect of intestinal microbes on silkworm in response to a high-temperature environment, this study used a combination of high throughput sequencing and biochemical assays to detect silkworm intestinal microbes treated with high temperature for 72 h. The results show that high temperature affects the intestinal microbes of silkworm and that there are sex differences, specifically, females were more sensitive. The changes in the metabolism and transport ability of silkworm intestinal tissues under high temperature are related to the intestinal microbes. High temperatures may affect the intestinal microbes of silkworms, regulating the activity of related digestive enzymes and substance transport in the intestine, thereby affecting the silkworm's digestion and absorption of nutrients, and ultimately affecting growth and development.

Flows and connections of metabolic nodes in Beijing-Tianjin-Hebei Region and its cities: A study at two scales.

The metabolic processes of cities and their embedded regions have received great attention, but it is still unclear how the metabolic processes change at the scale from cities to urban agglomerations. In view of the lack of multi-scale research in the field of urban metabolism, this study took Beijing-Tianjin-Hebei region, one of the urban agglomerations with largest economic scales in China, as a case to construct metabolic network models at two scales of city and urban agglomeration. The material transfers between nodes were calculated, and the connection degree index was put forward in the ecological network analysis to quantify the influence of a single node on the network when multi-level transfers were considered. On this basis, the similarities and differences of metabolic nodes at the two scales were analyzed. The results showed that nearly 97% of the volume of material transfers in the urban agglomeration was concentrated within the cities, among which the transfer volumes of Tangshan, Handan, and Shijiazhuang were more than 600 Mt. Manufacturing and environment were the major contributors to material transfers. The connection degrees of nodes had both commonness and differences at the two scales. In general, the connection degrees at the urban scale were relatively homogeneous, while their difference was large at the urban agglomeration scale. The connection degrees of nodes in Langfang were prominent at the urban agglomeration scale. The connection degrees of environment and manufacturing ranked top 3 at both scales. Meanwhile, the connection degree of energy conversion at the urban scale was relatively high, while its influence was replaced by mining sector at the urban agglomeration scale. The analysis of material metabolic nodes in Beijing-Tianjin-Hebei region can provide theoretical supports to position the key points in the process of material utilization in the cities or the urban agglomeration, and help to identify the breakthrough points for subsequent regulatory.

Transcriptome analysis of Cinnamomum migao seed germination in medicinal plants of Southwest China.

BACKGROUND: Cinnamomum migao is an endangered evergreen woody plant species endemic to China. Its fruit is used as a traditional medicine by the Miao nationality of China and has a high commercial value. However, its seed germination rate is extremely low under natural and artificial conditions. As the foundation of plant propagation, seed germination involves a series of physiological, cellular, and molecular changes; however, the molecular events and systematic changes occurring during C. migao seed germination remain unclear. RESULTS: In this study, combined with the changes in physiological indexes and transcription levels, we revealed the regulation characteristics of cell structures, storage substances, and antioxidant capacity during seed germination. Electron microscopy analysis revealed that abundant smooth and full oil bodies were present in the cotyledons of the seeds. With seed germination, oil bodies and other substances gradually degraded to supply energy; this was consistent with the content of storage substances. In parallel to electron microscopy and physiological analyses, transcriptome analysis showed that 80-90 % of differentially expressed genes (DEGs) appeared after seed imbibition, reflecting important development and physiological changes. The unigenes involved in material metabolism (glycerolipid metabolism, fatty acid degradation, and starch and sucrose metabolism) and energy supply pathways (pentose phosphate pathway, glycolysis pathway, pyruvate metabolism, tricarboxylic acid cycle, and oxidative phosphorylation) were differentially expressed in the four germination stages. Among these DEGs, a small number of genes in the energy supply pathway at the initial stage of germination maintained high level of expression to maintain seed vigor and germination ability. Genes involved in lipid metabolism were firstly activated at a large scale in the LK (seed coat fissure) stage, and then genes involved in carbohydrates (CHO) metabolism were activated, which had their own species specificity. CONCLUSIONS: Our study revealed the transcriptional levels of genes and the sequence of their corresponding metabolic pathways during seed germination. The changes in cell structure and physiological indexes also confirmed these events. Our findings provide a foundation for determining the molecular mechanisms underlying seed germination.

[Evolution of Material Metabolism in China's Pulp and Paper Industry].

The pulp and paper industry is an important industry that is closely related to national socioeconomic development. To understand the historical trends of resource consumption and environmental pollution, we conducted an economy-wide material flow analysis and quantitatively evaluated the dynamic characteristics of input-output balances, material metabolism intensity, and resource recycling rate of China's pulp and paper industry, from 2005 to 2017. The results indicate downward trends in the material inputs and outputs of China's pulp and paper industry from 2005 to 2017, with water contributing over 90% of the totals. In recent years, with the continuous optimization of the raw material structure of the paper industry, the proportion of non-wood pulping has dropped from 42% to 13% and has been replaced by mainly waste paper pulping and wood pulping. Resource consumption can still be greatly reduced. In 2017, the amount of direct material input per ton of paper and paperboard had decreased by 67% from 2005 to 26 t. The consumption of fresh water per ton of paper and paperboard dropped by approximately 69% over the study period, whereas the water recycling rate increased significantly, reaching 77% in 2017. At present, the production of paper and paperboard is increasingly dependent on the input of domestic waste paper and imported wood, the proportions of which have increased from 21% and 9% in 2005 to 60% and 31% in 2017, respectively. However, the rate of domestic waste paper recycling is relatively low, and measures such as strengthening the construction of the recycling system and educating the residents about recycling are needed to alleviate the shortage of raw materials caused by restrictions on waste paper imports.

Metabolism Control in 3D-Printed Living Materials Improves Fermentation.

The three-dimensional (3D) printing of cell-containing polymeric hydrogels creates living materials (LMs), offering a platform for developing innovative technologies in areas like biosensors and biomanufacturing. The polymer material properties of cross-linkable F127-bis-urethane methacrylate (F127-BUM) allow reproducible 3D printing and stability in physiological conditions, making it suitable for fabricating LMs. Though F127-BUM-based LMs permit diffusion of solute molecules like glucose and ethanol, it remains unknown whether these are permissible for oxygen, essential for respiration. To determine oxygen permissibility, we quantified dissolved oxygen consumption by the budding yeast-laden F127-BUM-based LMs. Moreover, we obtained data on cell-retaining LMs, which allowed a direct comparison between LMs and suspension cultures. We further developed a highly reliable method to isolate cells from LMs for flow cytometry analysis, cell viability evaluation, and the purification of macromolecules. We found oxygen consumption heavily impaired inside LMs, indicating that yeast metabolism relies primarily on fermentation instead of respiration. Applying this finding to brewing, we observed a higher (3.7%) ethanol production using LMs than the traditional brewing process, indicating improved fermentation. Our study concludes that the present F127-BUM-based LMs are useful for microaerobic processes but developing aerobic bioprocesses will require further research.

Substance basis of warm nature of Poria cocos.

Objective: The research indicated that the nature of Chinese medicine is mainly related to body's substance and energy metabolism. The purpose of the study is to elucidate the substance basis for warm nature of Poria cocos (called Fuling (FL) in Chinese). Methods: In terms of the effects of its separated fractions on the substance and energy metabolism in rat models of cold-deficiency with Aconiti Lateralis Radix Praeparata (called Fuzi (FZ) in Chinese), with hot nature, as reference drug. Biochemical indexes in the material metabolism, energy metabolism, endocrine system, nervous system and nucleotide system were determined, then analyzed by additive, cluster and principal component analysis (PCA). Results: The medicinal natures of oligosaccharides and amino acids fractions were attributable to plain and crude polysaccharides, volatile oils and triterpenoids fractions were attributable to mild warm. Conclusion: The nature of FL was regarded as mild warm based on the old records of Chinese medicine and fractions of crude polysaccharides, volatile oils and triterpenoids might be the main substance basis for the warm nature of FL. It is the first time that substance basis of FL was elucidated from view point of medicinal nature.