Aqueous and Colloidal Dynamics in Size-Fractionated Paddy Soil Aggregates with Multiple Metal Contaminants under Redox Alternations.

Soil contamination by multiple metals is a significant concern due to the interlinked mobilization processes. The challenges in comprehending this issue arise from the poorly characterized interaction among different metals and the complexities introduced by spatial and temporal heterogeneity in soil systems. We delved into these complexities by incubating size-fractionated paddy soils under both anaerobic and aerobic conditions, utilizing a combination of techniques for aqueous and colloidal analysis. The contaminated paddy soil predominantly consisted of particles measuring <53, 250-53, and 2000-250 µm, with the <53 µm fractions exhibiting the highest concentrations of multiple metals. Interestingly, despite their higher overall content, the <53 µm fractions released less dissolved metal. Furthermore, glucose enhanced the release of arsenic while simultaneously promoting the sequestration of other metals, such as Pb, Zn, and Cu. Utilizing asymmetric flow field-flow fractionation, we unveiled the presence of both fine (0.3-130 kDa) and large (130-450 nm) colloidal pools, each carrying various metals with different affinities for iron minerals and organic matter. Our results highlighted the pivotal role of the <53 µm fraction as a significant reservoir for multiple metal contaminants in paddy soils, in which the colloidal metals were mainly associated with organic matter. These findings illuminated the size-resolved dynamics of soil metal cycling and provided insights for developing remediation strategies for metal-contaminated soil ecosystems.

Effects of tillage, crop establishment and diversification on soil organic carbon, aggregation, aggregate associated carbon and productivity in cereal systems of semi-arid Northwest India.

Intensive tillage based management practices are threatening soil quality and systems sustainability in the rice-wheat belt of Northwest India. Furthermore, it is accentuated with puddling of soil, which disrupts soil aggregates. Conservation agriculture (CA) practices involving zero tillage, crop residue management and suitable crop rotation can serve as better alternative to conventional agriculture for maintaining soil quality. Soil organic carbon is an important determinant of soil quality, playing critical role in food production, mitigation and adaptation to climate change as well as performs many ecosystem functions. To understand the turnover of soil carbon in different forms (Total organic carbon-TOC; aggregate associated carbon-AAC; particulate organic carbon- POC), soil aggregation and crop productivity with different management practices, one conventional agriculture based scenario and three CA based crop management scenarios namely conventional rice-wheat system (Sc1), partial CA based rice-wheat-mungbean system (Sc2), full CA-based rice-wheat-mungbean system (Sc3) and maize-wheat-mungbean system (Sc4) were evaluated. TOC was increased by 71%, 68% and 25% after 4 years of the experiment and 75%, 80% and 38% after 6 years of the experiment in Sc4, Sc3 and Sc2, respectively, over Sc1 at 0-15 cm soil depth. After 4 years of the experiment, 38.5% and 5.0% and after 6 years 50.8% and 24.4% improvement in total water stable aggregates at 0-15 and 15-30 cm soil depth, respectively was observed in CA-based scenarios over Sc1. Higher aggregate indices were associated with Sc3 at 0-15 cm soil depth than others. Among the size classes of aggregates, highest aggregate associated C (8.94 g kg-1) was retained in the 1-0.5 mm size class under CA-based scenarios. After 6 years, higher POC was associated with Sc4 (116%). CA-based rice/maize system (Sc3 and Sc4) showed higher productivity than Sc1. Therefore, CA could be a potential management practice in rice-wheat cropping system of Northwest India to improve the soil carbon pools through maintaining soil aggregation and productivity.

Response of the respiratory mucosal cells to mycobacterium avium subsp. Hominissuis microaggregate.

Mycobacterium avium: subsp. hominissuis (MAH) is an opportunistic pathogen that commonly infects immunocompromised individuals. Recently, we described an invasive phenotypic change MAH undergoes when incubated with lung airway epithelial host cells for 24 h, which is accompanied with microaggregate formation in vitro. The microaggregate phenotype also resulted in higher colonization in the lungs of mice early during infection. Previously, we identified genes highly regulated during microaggregate formation and further characterized the function of two highly upregulated bacterial proteins, mycobacterial binding protein-1 (MBP-1) and mycobacterial inversion protein-1 (MIP-1), which were found to be involved in binding and invasion of the respiratory mucosa. While these studies are valuable in understanding the pathogenesis of MAH, they primarily investigated the bacteria during microaggregate infection without commenting on the differences in the host response to microaggregate and planktonic infection. The bacteria-host interaction between microaggregates and epithelial cells was examined in a variety of assays. Using a transwell polarized epithelial cell model, microaggregates translocated through the monolayer more efficiently than planktonic bacteria at set timepoints. In addition, during infection with microaggregate and planktonic bacteria, host phosphorylated proteins were identified revealing differences in immune response, glutathione synthesis, and apoptosis. The host immune response was further investigated by measuring pro-inflammatory cytokine secretion during microaggregate and planktonic infection of BEAS-2B bronchial epithelial cells. The epithelial cells secreted more CCL5 during infection with microaggregates suggesting that this chemokine may play an important role during microaggregate invasion. Subsequent experiments showed that microaggregates are formed more efficiently in the presence of CCL5, suggesting that MAH had evolved a strategy to use the host response in its benefit. Collectively, this study establishes the different nature of infection by planktonic bacteria and microaggregates.

Linking the humification of organic amendments with size aggregate distribution: Insights into molecular composition using FT-ICR-MS.

Soil organic matter (SOM) plays a pivotal role in enhancing physical and biological characteristics of soil. Humic substances constitute a substantial proportion of SOM and their increase can improve crop yields and promote agricultural sustainability. While previous research has primarily assessed the influence that humic acids (HAs) derived from natural water have on soil structure, our study focuses on the impact of HAs on soil aggregation under different fertilizer regimes. During the summer cropping season, maize was cultivated under organic and synthetic fertilizer treatments. The organic fertilizer treatment utilized barley (Hordeum vulgare L.) and hairy vetch (Vicia villosa R.) as an organic amendment five days prior to maize planting. The synthetic treatment included a synthetic fertilizer (NPK) applied at South Korea's recommended rates. The organic treatment resulted in significant improvements in the soil aggregates and stability (mean weight diameter, MWD; p < 0.05) compared to the synthetic fertilizer application. These improvements could be primarily attributed to the increased quantity and quality of HAs in the soil derived from the organic amendment. The amount of extracted HAs in the organic treatment was nearly twice that of the synthetic treatment. Additionally, the organic treatment had a 140 % larger MWD and a 40 % increase in total phenolic content compared to the synthetic treatment. The organic treatment also had an increased macronutrient uptake (p < 0.001), an 11 % increase in aboveground maize biomass, and a 21 % increase in grain yield relative to the synthetic treatment. Thus, the enhancement of HA properties through the incorporation of fresh organic manure can both directly and indirectly increase crop productivity.

Thick roots and less microaggregates improve hydrological connectivity.

Due to human activity and global climate change, the Yellow River Delta, the youngest delta wetland in China, is suffering serious degradation. The study of hydrological connection provides new perspectives and technical support for the protection and restoration of delta wetlands. To quantify the interaction between the hydrological connection and the root-soil complex, the current study took dye-tracing experiments to examine the small-scale hydrological connectivity in soil where Phramites australis grew. The dye coverage was selected as the indicator of hydrological connectivity after preliminary analysis in this study. The main results were that (1) the strength of hydrological connectivity was negatively related to the microaggregates content, but had little to do with other soil physical properties; (2) there was a notable positive correlation between the indexes of thick root (D > 5 mm) and the dye coverage hydrological connectivity, while root biomass had little effect on hydrological connectivity; and (3) the influence of the microaggregate content dominated in the combined effect of the total surface area of the root (D > 5 mm) and the microaggregate content on hydrological connectivity in each soil layer.

Efficiency of leukocyte depletion filters and micro-aggregate filters following intra-operative cell salvage during cesarean delivery.

BACKGROUND: Intra-operative cell salvage is not routinely used during cesarean delivery because it is not cost-effective for patients at low risk of hemorrhage and there are theoretical concerns about amniotic fluid embolism. Some guidelines recommend using leukocyte depletion filters to decrease the risk of amniotic fluid embolism before re-infusing salvaged blood, but these filters are not available in Japan. We compared the efficacy and safety of leukocyte depletion and micro-aggregate filters in combination with intra-operative cell salvage during cesarean delivery. METHODS: Blood was collected in a Cell Saver 5 reservoir during cesarean delivery. Four samples were collected: pre-wash, post-wash, post-filtration with a leukocyte depletion filter and post-filtration with a micro-aggregate filter. Each sample was analyzed for amniotic fluid markers of zinc coproporphyrin-1 and sialyl-Tn, for fetal hemoglobin, and the sample underwent pathological examination for white blood cells and squamous cells. Post-filtration samples were compared using paired t-tests with P <0.05 indicating statistical significance. RESULTS: Zinc coproporphyrin-1 and sialyl-Tn were negative at almost all sample points. Squamous cells decreased by 59.1% post-wash and 91.2% post-filtration using a leukocyte depletion filter. Leukocyte depletion filters removed 99.7% of white blood cells and were more effective in removing white blood cells than micro-aggregate filters (P=0.02). CONCLUSION: Leucocyte depletion filters are more effective in removing white blood cells and squamous cells than micro-aggregate filters, and their introduction for intra-operative cell salvage during cesarean delivery should be considered in Japanese clinical practice.

[Composition and fractal features of soil micro-aggregates in microsites of different types of treefall gaps]. / ä¸åŒæž—åž‹æ ‘å€’æž—éš™å† å¾®ç«‹åœ°ç±»åž‹çš„åœŸå£¤å¾®å›¢èšä½“ç»„æˆåŠå ¶åˆ†å½¢ç‰¹å¾.

Through field survey and laboratory analysis, we examined the composition and fractal features of soil micro-aggregates in different types of treefall gaps and microsites (pit bottom and mound top) in broad-leaved Korean pine forest and spruce-fir-Korean pine forest. Results showed that the contents of soil microaggregates under the classes of 0.25-2 mm and 0.05-0.25 mm were higher in both forest types, ranging from 25.7% to 50.7% and from 27.0% to 42.8%, respectively, and that of <0.002 mm was the lowest, ranging from 4.4% to 8.9%. In the pit bottom and mound top of gaps, soil bulk density was higher in both forest types. Soil nutrient content in mound top was higher than that in pit bottom and was higher in broad-leaved Korean pine forest than spruce-fir-Korean pine forest. Soil microaggregates of <0.002 mm had no correlation with soil physical and chemical properties, whereas that of 0.25-2 mm and 0.002-0.02 mm had significantly positive and negative correlation with soil non-capillary porosity, total porosity, aeration porosity, organic matter, total phosphorus, total nitrogen and organic carbon, respectively. On the whole, soil fractal dimension (D) and the proportion of characteristic soil micro-aggregates (PCM) in broad-leaved Korean pine forest were larger than those in spruce-fir-Korean pine forest, and the ratio of soil microaggregates diameter (RMD) in mound top and pit bottom was increased in two forest types. Soil D and PCM had no significant correlation with soil physical and chemical properties, while RMD was negatively correlated with capillary porosity, total porosity, soil bulk density and aeration porosity. In two forest types, the formation of mound and pit microsites could decrease the larger size micro-aggregates and the stability of soil micro-aggregate, increase soil D and PCM, and signifi-cantly increase RMD. RMD could be used as a quantitative index of soil physical and chemical properties in pit and mound microsites of forest.

Effect of the Content of Micro-Active Copper Tailing on the Strength and Pore Structure of Cementitious Materials.

This study investigates the effect of micr-oaggregate filling with copper tailing on the pore structure of cement paste containing copper tailing (CPCT). The particle size of the CPCT and the pore structure of CPCT were analyzed by laser particle size analysis and mercury instruction porosimetry (MIP). Results showed that at the early stage of curing time, with increasing copper tailing content, the compressive strength of cement mortar with copper tailing (CMCT) was lower, and the porosity and pore diameter of CPCT were higher and greater; with the extension of curing age, when the content of copper tailing was less than 30%, the compressive strength of CMCT and the porosity of CPCT changed slightly with the increase of the content of copper tailing. However, the maximum hole diameter of CPCT decreased gradually (a curing age between 7 d and 365 d under standard conditions). Scanning electron microscopy analysis showed that at the early stage of cement hydration in the CPCT, the copper tailing did not fill the pores in CPCT well, while in the later stage of cement hydration, the microaggregates of copper tailing filled the pores well and closely combined with the surrounding hydration products. In the later stage of cement hydration, the microaggregate filling of copper tailing was primarily responsible for the strength increase of the CMCT.

Rapid Formation of Microbe-Oil Aggregates and Changes in Community Composition in Coastal Surface Water Following Exposure to Oil and the Dispersant Corexit.

During the Deepwater Horizon (DWH) oil spill, massive quantities of oil were deposited on the seafloor via a large-scale marine oil-snow sedimentation and flocculent accumulation (MOSSFA) event. The role of chemical dispersants (e.g., Corexit) applied during the DWH oil spill clean-up in helping or hindering the formation of this MOSSFA event are not well-understood. Here, we present the first experiment related to the DWH oil spill to specifically investigate the relationship between microbial community structure, oil and Corexit®, and marine oil-snow in coastal surface waters. We observed the formation of micron-scale aggregates of microbial cells around droplets of oil and dispersant and found that their rate of formation was directly related to the concentration of oil within the water column. These micro-aggregates are potentially important precursors to the formation of larger marine oil-snow particles. Therefore, our observation that Corexit® significantly enhanced their formation suggests dispersant application may play a role in the development of MOSSFA events. We also observed that microbial communities in marine surface waters respond to oil and oil plus Corexit® differently and much more rapidly than previously measured, with major shifts in community composition occurring within only a few hours of experiment initiation. In the oil-amended treatments without Corexit®, this manifested as an increase in community diversity due to the outgrowth of several putative aliphatic- and aromatic-hydrocarbon degrading genera, including phytoplankton-associated taxa. In contrast, microbial community diversity was reduced in mesocosms containing chemically dispersed oil. Importantly, different consortia of hydrocarbon degrading bacteria responded to oil and chemically dispersed oil, indicating that functional redundancy in the pre-spill community likely results in hydrocarbon consumption in both undispersed and dispersed oils, but by different bacterial taxa. Taken together, these data improve our understanding of how dispersants influence the degradation and transport of oil in marine surface waters following an oil spill and provide valuable insight into the early response of complex microbial communities to oil exposure.

Effects of binding materials on microaggregate size distribution in bauxite residues.

It is recognized that for successful establishment of a vegetation cover on bauxite residue disposal areas, soil formation and a greater understanding of the processes of soil development are crucial. The stability of microaggregates is a very important physical property that prevents erosion in bauxite residues. Samples were collected from a disposal area in Central China to determine not only the mechanism of aggregation but also clay dispersion. Colloidal stability was assessed by determining organic matter, carbonate, electrolyte, clay mineral, and iron-aluminum oxide forms, as these would contribute to their stability. Organic matter improved microaggregate stability by combining with clay particles and polyvalent cations to form macroaggregates. Polyvalent cations such as calcium had a positive effect on particle flocculation, while organic molecules were more effective at stabilizing microaggregates. Removal of salinity dispersed silt-size aggregates into clay-size aggregates and reduced microaggregate stability. Calcium improved particle aggregation, while sodium had the reverse effect. Quartz powder was added to the residues but did not show any cementing effect, while free and amorphous iron-aluminum oxides were effective binding agents for microaggregate formation. We propose that the presence of organic matter and polyvalent cations, together with incorporation of organic carbon and calcium minerals, may enhance the stability of this material and prove beneficial toward improving its physical condition.

Understanding Mycobacterium avium subspecies hominissuis microaggregate mediated pathogenesis.

Mycobacterium avium subspecies hominissuis (MAH) is an opportunistic pathogen and causes nontuberculous infections in immune compromised individuals, an emerging problem that has been recognized worldwide. Understanding the pathogenesis of this organism is important as better treatment and prevention options are needed. Microaggregates form when two or more bacterial cells join at a surface. MAH forms micgroaggregates to promote its entry in to epithelial cells and cause infection. The mechanisms involved in the interaction between the microaggregate and the host are becoming clearer as the molecules involved in this process are being uncovered. Microaggregate Invasion Protein-1 (MIP-1) is now described as having a major role in the invasion of epithelial cells by MAH.

Microaggregate-associated protein involved in invasion of epithelial cells by Mycobacterium avium subsp. hominissuis.

The environmental opportunistic pathogen Mycobacterium avium subsp hominissuis (MAH), a member of the nontuberculous mycobacteria (NTM) cluster, causes respiratory as well as disseminated disease in patients such as those with chronic respiratory illnesses or AIDS. Currently, there is no effective method to prevent NTM respiratory infections. The formation of mycobacterial microaggregates comprises of phenotypic changes that lead to efficient adherence and invasion of the respiratory mucosa in vitro and in vivo. Microaggregate adhesion to the respiratory epithelium is mediated in part through the mycobacterial protein, MAV_3013 (MBP-1). Through DNA microarray analysis, the small hypothetical gene MAV_0831 (Microaggregate Invasion Protein-1, MIP-1) was identified as being upregulated during microaggregate formation. When MIP-1 was overexpressed in poorly-invasive Mycobacterium smegmatis, it provided the bacterium the ability to bind and enter epithelial cells. In addition, incubating microaggregates with recombinant MIP-1 protein enhanced the ability of microaggregates to invade HEp-2 cells, and exposure to anti-MIP-1 immune serum reduced the invasion of the host epithelium. Through protein-protein interaction assays, MIP-1 was found to bind to the host protein filamin A, a cytoskeletal actin-binding protein integral to the modulation of host cell shape and migration. As visualized by immunofluorescence, filamin A was able to co-localize with microaggregates and to a lesser extent planktonic bacteria. Invasion of HEp-2 cells by microaggregates and planktonic bacteria was also inhibited by the addition of anti-filamin A antibody suggesting that filamin A plays an important role during infection. In addition, at earlier time points binding and invasion assay results suggest that MBP-1 participates significantly during the first interactions with the host cell while MIP-1 becomes important once the bacteria adhere to the host epithelium. In summary, we have unveiled one more step associated with MAH crossing the respiratory mucosa.

Aerobic granulation of aggregating consortium X9 isolated from aerobic granules and role of cyclic di-GMP.

This study monitored the granulation process of an aggregating functional consortium X9 that was consisted of Pseudomonas putida X-1, Acinetobacter sp. X-2, Alcaligenes sp. X-3 and Comamonas testosteroni X-4 in shaken reactors. The growth curve of X9 was fit using logistic model as follows y=1.49/(1+21.3*exp(-0.33x)), the maximum specific cell growth rate for X9 was 0.33 h(-1). Initially X9 consumed polysaccharides (PS) and secreted proteins (PN) to trigger granulation. Then X9 grew in biomass and formed numerous micro-granules, driven by increasing hydrophobicity of cell membranes and of accumulated extracellular polymeric substances (EPS). In later stage the intracellular cyclic diguanylate (c-di-GMP) was at high levels for inhibiting bacteria swarming motility, thereby promotion formation of large aerobic granules. The findings reported herein advise the way to accelerate granule formation and to stabilize operation in aerobic granular reactors.