Enhancing Query Formulation for Universal Image Segmentation.

Recent advancements in image segmentation have been notably driven by Vision Transformers. These transformer-based models offer one versatile network structure capable of handling a variety of segmentation tasks. Despite their effectiveness, the pursuit of enhanced capabilities often leads to more intricate architectures and greater computational demands. OneFormer has responded to these challenges by introducing a query-text contrastive learning strategy active during training only. However, this approach has not completely addressed the inefficiency issues in text generation and the contrastive loss computation. To solve these problems, we introduce Efficient Query Optimizer (EQO), an approach that efficiently utilizes multi-modal data to refine query optimization in image segmentation. Our strategy significantly reduces the complexity of parameters and computations by distilling inter-class and inter-task information from an image into a single template sentence. Furthermore, we propose a novel attention-based contrastive loss. It is designed to facilitate a one-to-many matching mechanism in the loss computation, which helps object queries learn more robust representations. Beyond merely reducing complexity, our model demonstrates superior performance compared to OneFormer across all three segmentation tasks using the Swin-T backbone. Our evaluations on the ADE20K dataset reveal that our model outperforms OneFormer in multiple metrics: by 0.2% in mean Intersection over Union (mIoU), 0.6% in Average Precision (AP), and 0.8% in Panoptic Quality (PQ). These results highlight the efficacy of our model in advancing the field of image segmentation.

Mask-Pyramid Network: A Novel Panoptic Segmentation Method.

In this paper, we introduce a novel panoptic segmentation method called the Mask-Pyramid Network. Existing Mask RCNN-based methods first generate a large number of box proposals and then filter them at each feature level, which requires a lot of computational resources, while most of the box proposals are suppressed and discarded in the Non-Maximum Suppression process. Additionally, for panoptic segmentation, it is a problem to properly fuse the semantic segmentation results with the Mask RCNN-produced instance segmentation results. To address these issues, we propose a new mask pyramid mechanism to distinguish objects and generate much fewer proposals by referring to existing segmented masks, so as to reduce computing resource consumption. The Mask-Pyramid Network generates object proposals and predicts masks from larger to smaller sizes. It records the pixel area occupied by the larger object masks, and then only generates proposals on the unoccupied areas. Each object mask is represented as a H × W × 1 logit, which fits well in format with the semantic segmentation logits. By applying SoftMax to the concatenated semantic and instance segmentation logits, it is easy and natural to fuse both segmentation results. We empirically demonstrate that the proposed Mask-Pyramid Network achieves comparable accuracy performance on the Cityscapes and COCO datasets. Furthermore, we demonstrate the computational efficiency of the proposed method and obtain competitive results.

Automated Reference Kidney Histomorphometry using a Panoptic Segmentation Neural Network Correlates to Patient Demographics and Creatinine.

Reference histomorphometric data of healthy human kidneys are lacking due to laborious quantitation requirements. We leveraged deep learning to investigate the relationship of histomorphometry with patient age, sex, and serum creatinine in a multinational set of reference kidney tissue sections. A panoptic segmentation neural network was developed and used to segment viable and sclerotic glomeruli, cortical and medullary interstitia, tubules, and arteries/arterioles in digitized images of 79 periodic acid-Schiff (PAS)-stained human nephrectomy sections showing minimal pathologic changes. Simple morphometrics (e.g., area, radius, density) were measured from the segmented classes. Regression analysis was used to determine the relationship of histomorphometric parameters with age, sex, and serum creatinine. The model achieved high segmentation performance for all test compartments. We found that the size and density of nephrons, arteries/arterioles, and the baseline level of interstitium vary significantly among healthy humans, with potentially large differences between subjects from different geographic locations. Nephron size in any region of the kidney was significantly dependent on patient creatinine. Slight differences in renal vasculature and interstitium were observed between sexes. Finally, glomerulosclerosis percentage increased and cortical density of arteries/arterioles decreased as a function of age. We show that precise measurements of kidney histomorphometric parameters can be automated. Even in reference kidney tissue sections with minimal pathologic changes, several histomorphometric parameters demonstrated significant correlation to patient demographics and serum creatinine. These robust tools support the feasibility of deep learning to increase efficiency and rigor in histomorphometric analysis and pave the way for future large-scale studies.

Panoptic blind image inpainting.

In autonomous driving, scene understanding is a critical task in recognizing the driving environment or dangerous situations. Here, a variety of factors, including foreign objects on the lens, cloudy weather, and light blur, often reduce the accuracy of scene recognition. In this paper, we propose a new blind image inpainting model that accurately reconstructs images in a real environment where there is no ground truth for restoration. To this end, we first introduce a panoptic map to represent content information in detail and design an encoder-decoder structure to predict the panoptic map and the corrupted region mask. Then, we construct an image inpainting model that utilizes the information of the predicted map. Lastly, we present a mask refinement process to improve the accuracy of map prediction. To evaluate the effectiveness of the proposed model, we compared the restoration results of various inpainting methods on the cityscapes and coco datasets. Experimental results show that the proposed model outperforms other blind image inpainting models in terms of L1/L2 losses, PSNR and SSIM, and achieves similar performance to other image inpainting techniques that utilize additional information.

Mask-Transformer-Based Networks for Teeth Segmentation in Panoramic Radiographs.

Teeth segmentation plays a pivotal role in dentistry by facilitating accurate diagnoses and aiding the development of effective treatment plans. While traditional methods have primarily focused on teeth segmentation, they often fail to consider the broader oral tissue context. This paper proposes a panoptic-segmentation-based method that combines the results of instance segmentation with semantic segmentation of the background. Particularly, we introduce a novel architecture for instance teeth segmentation that leverages a dual-path transformer-based network, integrated with a panoptic quality (PQ) loss function. The model directly predicts masks and their corresponding classes, with the PQ loss function streamlining the training process. Our proposed architecture features a dual-path transformer block that facilitates bi-directional communication between the pixel path CNN and the memory path. It also contains a stacked decoder block that aggregates multi-scale features across different decoding resolutions. The transformer block integrates pixel-to-memory feedback attention, pixel-to-pixel self-attention, and memory-to-pixel and memory-to-memory self-attention mechanisms. The output heads process features to predict mask classes, while the final mask is obtained by multiplying memory path and pixel path features. When applied to the UFBA-UESC Dental Image dataset, our model exhibits a substantial improvement in segmentation performance, surpassing existing state-of-the-art techniques in terms of performance and robustness. Our research signifies an essential step forward in teeth segmentation and contributes to a deeper understanding of oral structures.

Automated Tubular Morphometric Visualization for Whole Kidney Biopsy.

One of the strongest prognostic predictors of chronic kidney disease is interstitial fibrosis and tubular atrophy (IFTA). The ultimate goal of IFTA calculation is an estimation of the functional nephritic area. However, the clinical gold standard of estimation by pathologist is imprecise, primarily due to the overwhelming number of tubules sampled in a standard kidney biopsy. Artificial intelligence algorithms could provide significant benefit in this aspect as their high-throughput could identify and quantitatively measure thousands of tubules in mere minutes. Towards this goal, we use a custom panoptic convolutional network similar to Panoptic-DeepLab to detect tubules from 87 WSIs of biopsies from native diabetic kidneys and transplant kidneys. We measure 206 features on each tubule, including commonly understood features like tubular basement membrane thickness and tubular diameter. Finally, we have developed a tool which allows a user to select a range of tubule morphometric features to be highlighted in corresponding WSIs. The tool can also highlight tubules in WSI leveraging multiple morphometric features through selection of regions-of-interest in a uniform manifold approximation and projection plot.

Automatic and intelligent content visualization system based on deep learning and genetic algorithm.

Increasing demand in distance education, e-learning, web-based learning, and other digital sectors (e.g., entertainment) has led to excessive amounts of e-content. Learning objects (LOs) are among the most important components of electronic content (e-content) and are preserved in learning object repositories (LORs). LORs produce different types of electronic content. In producing e-content, several visualization techniques are employed to attract users and ensure a better understanding of the provided information. Many of these visualization systems match images with corresponding text using methods such as semantic web, ontologies, natural language processing, statistical techniques, neural networks, and deep neural networks. Unlike these methods, in this study, an automatic and intelligent content visualization system is developed using deep learning and popular artificial intelligence techniques. The proposed system includes subsystems that segment images to panoptic image instances and use these image instances to generate new images using a genetic algorithm, an evolution-based technique that is one of the best-known artificial intelligence methods. This large-scale proposed system was used to test different amounts of LOs for various science fields. The results show that the developed system can be efficiently used to create visually enhanced content for digital use.

Panoptic Segmentation on Panoramic Radiographs: Deep Learning-Based Segmentation of Various Structures Including Maxillary Sinus and Mandibular Canal.

Panoramic radiographs, also known as orthopantomograms, are routinely used in most dental clinics. However, it has been difficult to develop an automated method that detects the various structures present in these radiographs. One of the main reasons for this is that structures of various sizes and shapes are collectively shown in the image. In order to solve this problem, the recently proposed concept of panoptic segmentation, which integrates instance segmentation and semantic segmentation, was applied to panoramic radiographs. A state-of-the-art deep neural network model designed for panoptic segmentation was trained to segment the maxillary sinus, maxilla, mandible, mandibular canal, normal teeth, treated teeth, and dental implants on panoramic radiographs. Unlike conventional semantic segmentation, each object in the tooth and implant classes was individually classified. For evaluation, the panoptic quality, segmentation quality, recognition quality, intersection over union (IoU), and instance-level IoU were calculated. The evaluation and visualization results showed that the deep learning-based artificial intelligence model can perform panoptic segmentation of images, including those of the maxillary sinus and mandibular canal, on panoramic radiographs. This automatic machine learning method might assist dental practitioners to set up treatment plans and diagnose oral and maxillofacial diseases.