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1.
Int Microbiol ; 23(2): 287-301, 2020 May.
Artigo em Inglês | MEDLINE | ID: mdl-31720871

RESUMO

The study characterizes the anamorphic Bjerkandera adusta strain CCBAS 930, including growth conditions, physiological properties, and enzymatic activities related to basic metabolism and specific properties coupled with the fungal secondary metabolism. It was established that the fungus grows in a wide pH range (3.5-7.5), up to 3% of salt concentration and a temperature of 5-30 °C. Media rich in natural organic components (potato, maize extracts, whey) are optimal for biomass propagation. Minimal media, containing mineral salts and glucose as well as static growth conditions, are required to obtain idiophasic mycelium, equivalent to the secondary metabolism of the fungus. Of the 7 complex C, N, and energy sources tested, the strain did not utilize only fibrous cellulose. Lipolytic activity reached the highest values of the enzymatic activities corresponding to those capabilities. The specific properties of strain B. adusta CCBAS 930 determined by the production of HRP-like peroxidase were related to the decolorization and biodegradation of anthraquinone derivative daunomycin. The decolorization of 30% of daunomycin effluents occurred most rapidly in iso-osmotic medium and non-enriched with nitrogen, containing 0.25% glucose, pH = 5.0-6.0, and 25-30 °C. In agitated cultures, the strain decolorized solutions of daunomycin by biosorption, which coincided with the inhibition of aerial mycelium production and HRP-like biosynthesis. Based on knowledge, potential and real possibilities of using the strain in bioremediation of colored industrial sewage were discussed.


Assuntos
Biodegradação Ambiental , Coriolaceae , Daunorrubicina/metabolismo , Antineoplásicos/metabolismo , Coriolaceae/crescimento & desenvolvimento , Coriolaceae/metabolismo , Resíduos Industriais
2.
World J Microbiol Biotechnol ; 37(1): 1, 2020 Dec 22.
Artigo em Inglês | MEDLINE | ID: mdl-33349893

RESUMO

We used a ligninolytic strain of the white-rot fungus B. adusta CCBAS 930 and its mutants with modified ligninolytic activity to assess their potential to remove of molasses. The analyzed strains have been shown to be able to decolorize 1% or 2% molasses solutions containing brown-colored toxic melanoidins. It was found that the decolorization process was determined by the transition to the stage of production of sporulating aerial mycelium (liquid and agar cultures) coupled with an increase in peroxidase activity, which was accompanied by a decrease in the level of melanoidin, free radicals, and phenolic compounds. Four different peroxidase activities were detected in post-culture liquids, i.e. horseradish-like (HRP-like), manganese-dependent (MnP), lignin (LiP), and versatile (VP) peroxidase activities. The HRP-like peroxidase was characterized by the highest activity. The efficiency of removal of melanoidins from a 1% molasses solution by the parental strain and the mutants was dependent on the culture method. The highest efficiency was noted in immobilized cultures (threefold higher than in the mycelium-free cultures), which was accompanied by stimulation of HRP-like peroxidase activity. Mutant 930-5 was found to be the most effective in the decolorization and decomposition of melanoidin. The HRP-like activity in the immobilized cultures of B. adusta 930-5 was 640-fold higher than in the mycelium-free cultures of the fungus. Moreover, decolorization and biodegradation of melanoidin by B. adusta CCBAS 930 and 930-5 was coupled with detoxification.


Assuntos
Beta vulgaris/química , Coriolaceae/crescimento & desenvolvimento , Peroxidase/metabolismo , Polímeros/química , Biodegradação Ambiental , Coriolaceae/genética , Coriolaceae/isolamento & purificação , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Técnicas Microbiológicas , Melaço , Mutação , Peroxidase/genética , Microbiologia do Solo
3.
Proc Natl Acad Sci U S A ; 113(39): 10968-73, 2016 09 27.
Artigo em Inglês | MEDLINE | ID: mdl-27621450

RESUMO

Wood-degrading brown rot fungi are essential recyclers of plant biomass in forest ecosystems. Their efficient cellulolytic systems, which have potential biotechnological applications, apparently depend on a combination of two mechanisms: lignocellulose oxidation (LOX) by reactive oxygen species (ROS) and polysaccharide hydrolysis by a limited set of glycoside hydrolases (GHs). Given that ROS are strongly oxidizing and nonselective, these two steps are likely segregated. A common hypothesis has been that brown rot fungi use a concentration gradient of chelated metal ions to confine ROS generation inside wood cell walls before enzymes can infiltrate. We examined an alternative: that LOX components involved in ROS production are differentially expressed by brown rot fungi ahead of GH components. We used spatial mapping to resolve a temporal sequence in Postia placenta, sectioning thin wood wafers colonized directionally. Among sections, we measured gene expression by whole-transcriptome shotgun sequencing (RNA-seq) and assayed relevant enzyme activities. We found a marked pattern of LOX up-regulation in a narrow (5-mm, 48-h) zone at the hyphal front, which included many genes likely involved in ROS generation. Up-regulation of GH5 endoglucanases and many other GHs clearly occurred later, behind the hyphal front, with the notable exceptions of two likely expansins and a GH28 pectinase. Our results support a staggered mechanism for brown rot that is controlled by differential expression rather than microenvironmental gradients. This mechanism likely results in an oxidative pretreatment of lignocellulose, possibly facilitated by expansin- and pectinase-assisted cell wall swelling, before cellulases and hemicellulases are deployed for polysaccharide depolymerization.


Assuntos
Coriolaceae/genética , Regulação Fúngica da Expressão Gênica , Madeira/microbiologia , Análise por Conglomerados , Coriolaceae/enzimologia , Coriolaceae/crescimento & desenvolvimento , Genes Fúngicos , Lignina , Micélio/fisiologia , Oxirredução , Transcrição Gênica
4.
Fungal Genet Biol ; 106: 1-8, 2017 09.
Artigo em Inglês | MEDLINE | ID: mdl-28666924

RESUMO

Brown rot fungi initiate wood decay using oxidative pretreatments to improve access for cellulolytic enzymes. These pretreatments are incompatible with enzymes, and we recently showed that Postia placenta overcomes this issue by delaying glycoside hydrolase (GH) gene upregulation briefly (<48h) until expression of oxidoreductases (ORs) is repressed. This implies an inducible cellulase system rather than a constitutive system, as often reported, and it remains unclear what cues this transition. To address this, we grew P. placenta along wood wafers and spatially mapped expression (via quantitative PCR) of twelve ORs and GHs targeted using functional genomics analyses. By layering expression patterns over solubilized sugar data (via HPLC) from wood, we observed solubilization of wood glucose, cellobiose, mannose, and xylose coincident with the OR-GH transition. We then tested effects of these soluble sugars, plus polymeric carbon sources (spruce powder, cellulose), on P. placenta gene expression in liquid cultures. Expression of ORs was strictly (aox1, cro5) or progressively repressed over time (qrd1, lcc1) by all soluble sugars, including cellobiose, but not by polymeric sources. Simple sugars repressed hemicellulase gene expression over time, but these sugars did not repress cellulases. Cellulase genes were upregulated, however, along with hemicellulases in the presence of soluble cellobiose and in the presence of polymeric carbon sources, relative to starvation (carbon-free). This verifies an inducible cellulase system in P. placenta that lacks carbon catabolite repression (CCR), and it suggests that brown rot fungi use soluble sugars, particularly cellobiose, to cue a critical oxidative-hydrolytic transition.


Assuntos
Celulases/genética , Celulose/metabolismo , Coriolaceae/enzimologia , Madeira/microbiologia , Celulases/metabolismo , Coriolaceae/genética , Coriolaceae/crescimento & desenvolvimento , Regulação para Baixo , Expressão Gênica , Perfilação da Expressão Gênica , Glicosídeo Hidrolases/genética , Glicosídeo Hidrolases/metabolismo , Hidrólise , Monossacarídeos/metabolismo , Oxirredução , Oxirredutases/genética , Oxirredutases/metabolismo , Regulação para Cima
5.
Appl Environ Microbiol ; 83(7)2017 04 01.
Artigo em Inglês | MEDLINE | ID: mdl-28130302

RESUMO

Brown rot fungi are wood-degrading fungi that employ both oxidative and hydrolytic mechanisms to degrade wood. Hydroxyl radicals that facilitate the oxidative component are powerful nonselective oxidants and are incompatible with hydrolytic enzymes unless they are spatially segregated in wood. Differential gene expression has been implicated in the segregation of these reactions in Postia placenta, but it is unclear if this two-step mechanism varies in other brown rot fungi with different traits and life history strategies that occupy different niches in nature. We employed proteomics to analyze a progression of wood decay on thin wafers, using brown rot fungi with significant taxonomic and niche distances: Serpula lacrymans (Boletales; "dry rot" lumber decay) and Gloeophyllum trabeum (order Gloeophyllales; slash, downed wood). Both fungi produced greater oxidoreductase diversity upon wood colonization and greater glycoside hydrolase activity later, consistent with a two-step mechanism. The two fungi invested very differently, however, in terms of growth (infrastructure) versus protein secretion (resource capture), with the ergosterol/extracted protein ratio being 7-fold higher with S. lacrymans than with G. trabeum In line with the native substrate associations of these fungi, hemicellulase-specific activities were dominated by mannanase in S. lacrymans and by xylanase in G. trabeum Consistent with previous observations, S. lacrymans did not produce glycoside hydrolase 6 (GH6) cellobiohydrolases (CBHs) in this study, despite taxonomically belonging to the order Boletales, which is distinguished among brown rot fungi by having CBH genes. This work suggests that distantly related brown rot fungi employ staggered mechanisms to degrade wood, but the underlying strategies vary among taxa.IMPORTANCE Wood-degrading fungi are important in forest nutrient cycling and offer promise in biotechnological applications. Brown rot fungi are unique among these fungi in that they use a nonenzymatic oxidative pretreatment before enzymatic carbohydrate hydrolysis, enabling selective removal of carbohydrates from lignin. This capacity has independently evolved multiple times, but it is unclear if different mechanisms underpin similar outcomes. Here, we grew fungi directionally on wood wafers and we found similar two-step mechanisms in taxonomically divergent brown rot fungi. The results, however, revealed strikingly different growth strategies, with S. lacrymans investing more in biomass production than secretion of proteins and G. trabeum showing the opposite pattern, with a high diversity of uncharacterized proteins. The "simplified" S. lacrymans secretomic system could help narrow gene targets central to oxidative brown rot pretreatments, and a comparison of its distinctions with G. trabeum and other brown rot fungi (e.g., Postia placenta) might offer similar traction in noncatabolic genes.


Assuntos
Basidiomycota/crescimento & desenvolvimento , Basidiomycota/metabolismo , Coriolaceae/crescimento & desenvolvimento , Coriolaceae/metabolismo , Proteínas Fúngicas/metabolismo , Madeira/microbiologia , Basidiomycota/classificação , Basidiomycota/genética , Biomassa , Celulose 1,4-beta-Celobiosidase/metabolismo , Coriolaceae/classificação , Coriolaceae/genética , Glicosídeo Hidrolases/biossíntese , Glicosídeo Hidrolases/metabolismo , Hidrólise , Lignina/metabolismo , Oxirredução , Proteômica , Madeira/metabolismo
6.
Curr Microbiol ; 74(9): 1068-1075, 2017 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-28642970

RESUMO

DDT (1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane) is one of the pesticides that are hazardous for the environment and human health. Effective environmental-friendly treatment using co-cultures of fungi and bacteria is needed. In this study, the bacteria Bacillus subtilis at various volumes of 1, 3, 5, 7, and 10 mL (1 mL ≈ 6.7 × 108 CFU) were mixed into 10 mL of the brown-rot fungus Fomitopsis pinicola culture for degrading DDT during a 7-days incubation period. DDT was degraded by approximately 42% by F. pinicola during the 7-days incubation period. The addition of 10 mL of B. subtilis into F. pinicola culture showed the highest DDT degradation of approximately 86% during the 7-days incubation period. DDD (1,1-dichloro-2,2-bis(4-chlorophenyl)ethane), DDE (1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene), and DDMU (1-chloro-2,2-bis(4-chlorophenyl)ethylene) were detected as metabolic products from DDT degradation by co-cultures of F. pinicola and B. subtilis. Transformation pathway was proposed in which DDT was transformed into three pathways as follows: (1) dechlorination to DDD, (2) dehydrochlorination to DDE, and (3) formation of DDMU.


Assuntos
Bacillus subtilis/crescimento & desenvolvimento , Bacillus subtilis/metabolismo , Coriolaceae/crescimento & desenvolvimento , Coriolaceae/metabolismo , DDT/metabolismo , Técnicas Microbiológicas/métodos , Reatores Biológicos/microbiologia , Biotransformação , Diclorodifenil Dicloroetileno/análise , Diclorodifenildicloroetano/análise , Poluentes Ambientais/metabolismo , Redes e Vias Metabólicas , Praguicidas/metabolismo
7.
Artigo em Inglês | MEDLINE | ID: mdl-28763254

RESUMO

A new decolorizing white-rot fungus, OBR105, was isolated from Mount Odae in South Korea and identified by the morphological characterization of its fruit body and spores and partial 18s rDNA sequences. The ligninolytic enzyme activity of OBR105 was studied to characterize their decolorizing mechanism using a spectrophotometric enzyme assay. For the evaluation of the decolorization capacity of OBR105, the isolate was incubated in an erlenmeyer flask and in an airlifte bioreator with potato dextrose broth (PDB) medium supplemented with each dye. In addition, the decolorization efficiency of real textile wastewater was evaluated in an airlift bioreactor inoculated with the isolate. The isolate was identified as Bjerkandera adusta and had ligninolytic enzymes such as laccase, lignin peroxidase (LiP), and Mn-dependent peroxidase (MnP). Its LiP activity was higher than its MnP and laccase activities. B. adusta OBR105 successfully decolorized reactive dyes (red 120, blue 4, orange 16, and black 5) and acid dyes (red 114, blue 62, orange 7, and black 172). B. adusta OBR105 decolorized 91-99% of 200 mg L-1 of each dye (except acid orange 7) within 3 days in a PDB medium at 28°C, pH 5, and 150 rpm. This fungus decolorized only 45% of 200 mg L-1 acid orange 7 (single azo-type dye) within 3 days, and the decolorization efficiency did not increase by prolonging the cultivation time. In the air-lift bioreactor, B. adusta OBR105 displayed a high decolorization capacity, greater than 90%, for 3 acid dyes (red 114, blue 62, and black 172) and 1 reactive dye (blue 4) within 10-15 h of treatment. B. adusta OBR105 could decolorize real textile wastewater in the air-lift bioreactor. This result suggests that an air-lift reactor employing B. adusta OBR105 is a promising bioreactor for the treatment of dye wastewater.


Assuntos
Reatores Biológicos/microbiologia , Corantes/análise , Coriolaceae/crescimento & desenvolvimento , Poluentes Químicos da Água/análise , Purificação da Água/métodos , Corantes/química , Coriolaceae/enzimologia , Lacase/metabolismo , Peroxidases/metabolismo , República da Coreia , Têxteis , Poluentes Químicos da Água/química
8.
BMC Genomics ; 17: 234, 2016 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-26980399

RESUMO

BACKGROUND: The basidiomycete Rigidoporus microporus is a fungus that causes the white rot disease of the tropical rubber tree, Hevea brasiliensis, the major source of commercial natural rubber. Besides its lifestyle as a pathogen, the fungus is known to switch to saprotrophic growth on wood with the ability to degrade both lignin and cellulose. There is almost no genomic or transcriptomic information on the saprotrophic abilities of this fungus. In this study, we present the fungal transcriptomic profiles during saprotrophic growth on rubber wood. RESULTS: A total of 266.6 million RNA-Seq reads were generated from six libraries of the fungus growing either on rubber wood or without wood. De novo assembly produced 34, 518 unigenes with an average length of 2179 bp. Annotation of unigenes using public databases; GenBank, Swiss-Prot, Kyoto Encyclopedia of Genes and Genomes (KEGG), Cluster of Orthologous Groups (COG) and Gene Ontology (GO) produced 25, 880 annotated unigenes. Transcriptomic profiling analysis revealed that the fungus expressed over 300 genes encoding lignocellulolytic enzymes. Among these, 175 genes were up-regulated in rubber wood. These include three members of the glycoside hydrolase family 43, as well as various glycosyl transferases, carbohydrate esterases and polysaccharide lyases. A large number of oxidoreductases which includes nine manganese peroxidases were also significantly up-regulated in rubber wood. Several genes involved in fatty acid metabolism and degradation as well as natural rubber degradation were expressed in the transcriptome. Four genes (acyl-CoA synthetase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase and acyl-CoA acetyltransferase) potentially involved in rubber latex degradation pathway were also induced. A number of ATP binding cassette (ABC) transporters and hydrophobin genes were significantly expressed in the transcriptome during saprotrophic growth. Some genes related to energy metabolism were also induced. CONCLUSIONS: The analysed data gives an insight into the activation of lignocellulose breakdown machinery of R. microporus. This study also revealed genes with relevance in antibiotic metabolism (e.g. cephalosporin esterase) as well as those with potential applications in fatty acid degradation. This is the first study on the transcriptomic analysis of R. microporus on rubber wood and should serve as a pioneering resource for future studies of the fungus at the genomic or transcriptomic level.


Assuntos
Coriolaceae/crescimento & desenvolvimento , Coriolaceae/genética , Hevea/microbiologia , Transcriptoma , Regulação Fúngica da Expressão Gênica , Genes Fúngicos , Lignina/metabolismo , Polissacarídeos/metabolismo , Análise de Sequência de RNA , Madeira/microbiologia
9.
Biotechnol Appl Biochem ; 63(5): 652-658, 2016 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-26173087

RESUMO

In recent years, tannase has gained increasing interest mainly because of its potential applications. One of the most important functions of tannic acid (TA) hydrolase is the release of gallic acid (GA) from complex tannins. The aim of the study was to determine the dynamic changes in tannase activity depending on the carbon source in the culture medium. An extracellular and intracellular tannase activity analysis was carried out with the use of spectrophotometric analysis and confirmed by capillary electrophoresis in cultures of white-rot fungi: Phellinus pini, Fomes fomentarius, and Tyromyces pubescens. The inducible potential of TA and rapeseed meal on the activity of tannin acyl hydrolase was confirmed during 14 days of culturing. Different effects of the tested compounds on stimulation of tannase activity in selected fungal strains have been demonstrated. We concluded that rapeseed meal was the best inducer of tannase activity in the case of P. pini. However, the highest concentrations of GA were observed after stimulation by the TA in the cultures of F. fomentarius and T. pubescens.


Assuntos
Hidrolases de Éster Carboxílico/biossíntese , Hidrolases de Éster Carboxílico/metabolismo , Coriolaceae/crescimento & desenvolvimento , Coriolaceae/metabolismo , Meios de Cultura/química , Coriolaceae/efeitos dos fármacos , Ácido Gálico/metabolismo , Taninos/farmacologia
10.
World J Microbiol Biotechnol ; 32(3): 39, 2016 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-26867600

RESUMO

Benzo[a]pyrene (BaP) accumulates in marine organisms and contaminated coastal areas. The biotreatment of waste water using saline-alkaline-tolerant white rot fungi (WRF) represents a promising method for removing BaP under saline-alkaline conditions based on WRF's ability to produce ligninolytic enzymes. In a pre-screening for degradation of polycyclic aromatic hydrocarbons of 82 fungal strains using Remazol brilliant blue R, Bjerkandera adusta SM46 exhibited the highest tolerance to saline-alkaline stress. Moreover, a B. adusta culture grown in BaP-containing liquid medium exhibited resistance to salinities up to 20 g l(-1). These conditions did not inhibit fungal growth or the expression of manganese peroxidase (MnP) or lignin peroxidase (LiP). The degradation rate also became higher as salinity increased to 20 g l(-1). Fungal growth and enzyme expression were inhibited at a salinity of 35 g l(-1). These inhibitory effects directly decreased the degradation rate (>24%). The presence of MnSO4 as an inducer improved the degradation rate and enzyme expression. MnP and LiP activity also increased by seven- and fivefold, respectively. SM46 degraded BaP (38-89% over 30 days) in an acidic environment (pH 4.5) and under saline-alkaline stress conditions (pH 8.2). Investigating the metabolites produced revealed BaP-1,6-dione as the main product, indicating the important role of ligninolytic enzymes in initializing BaP cleavage. The other metabolites detected, naphthalene acetic acid, hydroxybenzoic acid, benzoic acid, and catechol, may have been ring fission products. The wide range of activities observed suggests that B. adusta SM46 is a potential agent for biodegrading BaP under saline conditions.


Assuntos
Álcalis/toxicidade , Benzo(a)pireno/metabolismo , Coriolaceae/efeitos dos fármacos , Peroxidases/metabolismo , Sais/toxicidade , Estresse Fisiológico , Biotransformação , Coriolaceae/enzimologia , Coriolaceae/crescimento & desenvolvimento , Coriolaceae/metabolismo
11.
World J Microbiol Biotechnol ; 32(9): 151, 2016 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-27465851

RESUMO

Piptoporus betulinus is a wood-rotting basidiomycete used in medicine and biotechnology. However, to date, no indoor method for cultivation of this mushroom fruiting bodies has been developed. Here we present the first report of successful production of P. betulinus mature fruiting bodies in artificial conditions. Four P. betulinus strains were isolated from natural habitats and their mycelia were inoculated into birch sawdust substrate supplemented with organic additives. All the strains effectively colonized the medium but only one of them produced fruiting bodies. Moisture and organic supplementation of the substrate significantly determined the fruiting process. The biological efficiency of the P. betulinus PB01 strain cultivated on optimal substrate (moisture and organic substance content of 55 and 65 and 25 or 35 %, respectively) ranged from 12 to 16 %. The mature fruiting bodies reached weight in the range from 50 to 120 g. Anticancer properties of water and ethanol extracts isolated from both cultured and nature-derived fruiting bodies of P. betulinus were examined in human colon adenocarcinoma, human lung carcinoma and human breast cancer cell lines. The studies revealed antiproliferative and antimigrative properties of all the investigated extracts. Nevertheless the most pronounced effects demonstrated the ethanol extracts, obtained from fruiting bodies of cultured P. betulinus. Summarizing, our studies proved that P. betulinus can be induced to fruit in indoor artificial culture and the cultured fruiting bodies can be used as a source of potential anticancer agents. In this respect, they are at least as valuable as those sourced from nature.


Assuntos
Antineoplásicos/química , Antineoplásicos/farmacologia , Coriolaceae/crescimento & desenvolvimento , Carpóforos/química , Células A549 , Betula/microbiologia , Linhagem Celular Tumoral , Movimento Celular/efeitos dos fármacos , Proliferação de Células/efeitos dos fármacos , Sobrevivência Celular/efeitos dos fármacos , Coriolaceae/química , Etanol/farmacologia , Células HT29 , Humanos , Micélio/química
12.
Biotechnol Appl Biochem ; 62(2): 173-85, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-24953758

RESUMO

Coculturing of two white-rot fungi, Dichomitus squalens and Ceriporiopsis subvermispora, was explored for the optimization of cultivation media for simultaneous augmentation of laccase and peroxidase activities by response surface methodology (RSM). Nutrient parameters chosen from our previous studies with the monocultures of D. squalens and C. subvermispora were used to design the experiments for the cocultivation study. Glucose, arabinose, sodium nitrate, casein, copper sulfate (CuSO4 ), and manganese sulfate (MnSO4 ) were combined according to central composite design and used as the incubation medium for the cocultivation. The interaction of glucose and sodium nitrate resulted in laccase and peroxidase activities of approximately 800 U/g protein. The addition of either glucose or sodium nitrate to the medium also modifies the impact of other nutrients on the ligninolytic activity. Both enzyme activities were cross-regulated by arabinose, casein, CuSO4 , and MnSO4 as a function of concentrations. Based on RSM, the optimum nutrient levels are 1% glucose, 0.1% arabinose, 20 mM sodium nitrate, 0.27% casein, 0.31 mM CuSO4 , and 0.07 mM MnSO4 . Cocultivation resulted in the production of laccase of 1,378 U/g protein and peroxidase of 1,372 U/g protein. Lignin (16.9%) in wheat straw was degraded by the optimized enzyme mixture.


Assuntos
Técnicas de Cocultura/métodos , Coriolaceae/enzimologia , Meios de Cultura/metabolismo , Lacase/biossíntese , Peroxidases/biossíntese , Polyporales/metabolismo , Técnicas de Cultura Celular por Lotes/métodos , Coriolaceae/crescimento & desenvolvimento , Meios de Cultura/química , Ativação Enzimática , Estabilidade Enzimática , Lacase/química , Lacase/isolamento & purificação , Peroxidases/química , Peroxidases/isolamento & purificação , Polyporales/crescimento & desenvolvimento
13.
Appl Environ Microbiol ; 80(7): 2062-70, 2014 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-24441164

RESUMO

The white-rot basidiomycetes efficiently degrade all wood cell wall polymers. Generally, these fungi simultaneously degrade cellulose and lignin, but certain organisms, such as Ceriporiopsis subvermispora, selectively remove lignin in advance of cellulose degradation. However, relatively little is known about the mechanism of selective ligninolysis. To address this issue, C. subvermispora was grown in liquid medium containing ball-milled aspen, and nano-liquid chromatography-tandem mass spectrometry was used to identify and estimate extracellular protein abundance over time. Several manganese peroxidases and an aryl alcohol oxidase, both associated with lignin degradation, were identified after 3 days of incubation. A glycoside hydrolase (GH) family 51 arabinofuranosidase was also identified after 3 days but then successively decreased in later samples. Several enzymes related to cellulose and xylan degradation, such as GH10 endoxylanase, GH5_5 endoglucanase, and GH7 cellobiohydrolase, were detected after 5 days. Peptides corresponding to potential cellulose-degrading enzymes GH12, GH45, lytic polysaccharide monooxygenase, and cellobiose dehydrogenase were most abundant after 7 days. This sequential production of enzymes provides a mechanism consistent with selective ligninolysis by C. subvermispora.


Assuntos
Coriolaceae/enzimologia , Coriolaceae/metabolismo , Enzimas/metabolismo , Proteínas Fúngicas/metabolismo , Lignina/metabolismo , Proteoma/análise , Madeira/microbiologia , Biotransformação , Cromatografia Líquida , Coriolaceae/crescimento & desenvolvimento , Perfilação da Expressão Gênica , Espectrometria de Massas , Fatores de Tempo
14.
World J Microbiol Biotechnol ; 30(12): 3065-74, 2014 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-25178492

RESUMO

The secretion of exopolysaccharides and oxalic acid in cultures of a white rot Ganoderma applanatum strain and a brown rot Tyromyces palustris strain were tested in terms of culture time, pH range, and temperature. The high yield of exopolysaccharides (EPS) required a moderate temperature of 28 °C for G. applanatum and 20 °C for T. palustris. G. applanatum and T. palustris accumulated more EPS when the concentration of the carbon source (maltose for G. applanatum and fructose for T. palustris) was 30 g/L. The results indicate that the production of oxalic acid by G. applanatum is correlated with the initial pH value of the culture medium and the concentration of oxalic acid increased to 1.66 ± 0.2 mM at the initial pH of 6.5 during the fungal growth. During the growth of T. palustris, the reduction of the initial pH value of the growing medium lowered the oxalic acid concentration from 7.7 ± 0.6 mM at pH 6.0 to 1.99 ± 0.2 mM at pH 3.5. T. palustris accumulated considerably more oxalic acid than G. applanatum and its presence did not affect significantly the production of exopolysaccharides. We also observed that the maximum amounts of exopolysaccharides secreted during cultivation of G. applanatum and T. palustris were 45.8 ± 1.2 and 19.1 ± 1.2 g/L, respectively.


Assuntos
Coriolaceae/crescimento & desenvolvimento , Coriolaceae/metabolismo , Ganoderma/crescimento & desenvolvimento , Ganoderma/metabolismo , Ácido Oxálico/metabolismo , Polissacarídeos/metabolismo , Carbono/metabolismo , Meios de Cultura/química , Concentração de Íons de Hidrogênio , Temperatura , Fatores de Tempo
15.
Appl Microbiol Biotechnol ; 97(19): 8831-40, 2013 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-23917637

RESUMO

Interest in the mechanisms of wood-degrading fungi has grown in tandem with lignocellulose bioconversion efforts, yet many potential biomass feedstocks are non-woody. Using corn stover (Zea mays) as a substrate, we tracked degradative capacities among brown rot fungi from the Antrodia clade, including Postia placenta, the first brown rot fungus to have its genome sequenced. Decay dynamics were compared against Gloeophyllum trabeum from the Gloeophyllum clade. Weight loss induced by P. placenta (6.2 %) and five other Antrodia clade isolates (average 7.4 %) on corn stalk after 12 weeks demonstrated inefficiency among these fungi, relative to decay induced by G. trabeum (44.4 %). Using aspen (Populus sp.) as a woody substrate resulted in, on average, a fourfold increase in weight loss induced by Antrodia clade fungi, while G. trabeum results matched those on stover. The sequence and trajectories of chemical constituent losses differed as a function of substrate but not fungal clade. Instead, chemical data suggest that characters unique to stover limit decay by the Antrodia clade, rather than disparities in growth rate or extractives toxicity. High p-coumaryl lignin content, lacking the methoxy groups characteristically cleaved during brown rot, is among potential rate-distinguishing characters in grasses. This ineptitude among Antrodia clade fungi on grasses was supported by meta-analysis of other unrelated studies using grass substrates. Concerning application, results expose a problem if adopting the strategy of the model decay fungus P. placenta to treat corn stover, a widely available plant feedstock. Overall, the results insinuate phylogenetically distinct modes of brown rot and demonstrate the benefit of using non-woody substrates to probe wood degradation mechanisms.


Assuntos
Basidiomycota/crescimento & desenvolvimento , Basidiomycota/metabolismo , Coriolaceae/crescimento & desenvolvimento , Coriolaceae/metabolismo , Poaceae/metabolismo , Populus/metabolismo , Zea mays/metabolismo , Meios de Cultura/química , Micologia/métodos , Poaceae/microbiologia , Populus/microbiologia , Zea mays/microbiologia
16.
World J Microbiol Biotechnol ; 29(4): 753-8, 2013 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-23229287

RESUMO

Laetiporus sulphureus is an edible wood-rotting basidiomycete fungus whose fruiting bodies contain substances with verified therapeutic evidences and large amounts of α-(1 → 3)-glucan which is used as an effective inducer of microbial α-(1 → 3)-glucanases. However, production of mature fruiting bodies of this species under artificially controlled conditions has not been reported until now. Here, we provide the first report of successful initiation and development of L. sulphureus fruiting bodies in large-scale experiments. Twelve Laetiporus strains were isolated from a natural habitat. A synthetic log production system with a substrate composed of a mixture of sawdust enriched with organic and inorganic additives was developed. It was found that shocking the fungus mycelium with cold water or low temperature was the only suitable method for forced fruiting of L. sulphureus strains. Primordia of two strains were initiated already after 5-6 days from induction, and after another 2 days, they began to develop into fruiting bodies. Carpophores appeared fastest on substrates with high organic supplementation (40-45 %) and a low moisture content (40 %). The resulting mature fruiting bodies reached a weight of 200-300 g. The method of cultivation presented in this paper opens the way to commercial production of this valuable basidiomycete.


Assuntos
Coriolaceae/crescimento & desenvolvimento , Meios de Cultura/química , Carpóforos/crescimento & desenvolvimento , Temperatura Baixa , Coriolaceae/classificação , Coriolaceae/isolamento & purificação , Coriolaceae/efeitos da radiação , DNA Fúngico/química , DNA Fúngico/genética , DNA Espaçador Ribossômico/química , DNA Espaçador Ribossômico/genética , Carpóforos/efeitos da radiação , Dados de Sequência Molecular , Análise de Sequência de DNA
17.
Bioprocess Biosyst Eng ; 35(5): 751-60, 2012 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-22116528

RESUMO

The lignin-modifying enzymes (LMEs) play an important role in decomposition of agricultural residues, which contain a certain amount of lignin. In this study, the production of LMEs by three co-cultivated combinations of Phlebia radiata, Dichomitus squalens and Ceriporiopsis subvermispora and the respective monocultures was comparatively investigated. Laccase and manganese peroxidases (MnP) were significantly promoted in the co-culture of P. radiata and D. squalens, and corncob was verified to be beneficial for laccase and MnP production. Moreover, laccase production by co-culture of P. radiata and D. squalens with high ratio of glucose to nitrogen was higher than low ratio under carbon- and nitrogen-meager conditions. New laccase isoenzymes measured by Native-PAGE were stimulated by co-cultured P. radiata with D. squalens or C. subvermispora, respectively, growing in the defined medium containing corncob, but the expression of laccase was greatly restrained by the co-culturing of D. squalens with C. subvermispora. This study showed that the synergistic and depressing effects of co-cultivation of P. radiata, D. squalens and C. subvermispora on LMEs were species specific.


Assuntos
Coriolaceae/enzimologia , Coriolaceae/crescimento & desenvolvimento , Proteínas Fúngicas/biossíntese , Lacase/biossíntese , Peroxidases/biossíntese , Técnicas de Cocultura , Lignina/metabolismo
18.
J Basic Microbiol ; 52(2): 167-74, 2012 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-21953318

RESUMO

A thermotolerant white-rot fungus was identified as Fomes sp. EUM1. The strain exhibited maximum growth at 30 °C, with activation and inactivation energy values of 68 and 32 kJ/mol, respectively. The temperature affected the hyphal morphology, which was related to the thermotolerance of the microorganism: A shift from 30 to 40 °C in the growth temperature caused a decrease (15%) in mycelium branching; also longer (32%) and thinner (13%) hyphae were produced. In addition, as the temperature rose from 25 to 45 °C, an increase was observed in both the hyphal surface area (43%) and the surface growth rate (193%). The modification of the hyphal morphology suggests a strategy to colonize nutrient-rich areas while spending minimal energy for biomass formation under thermal stress.


Assuntos
Adaptação Fisiológica , Coriolaceae/crescimento & desenvolvimento , Temperatura , Biomassa , Coriolaceae/fisiologia , Hifas/crescimento & desenvolvimento
19.
Int J Mol Sci ; 13(8): 9584-9598, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22949817

RESUMO

Mutanase (α-(1→3)-glucanase) is a little-known inductive enzyme that is potentially useful in dentistry. Here, it was shown that the cell wall preparation (CWP) obtained from the fruiting body or vegetative mycelium of polypore fungus Laetiporus sulphureus is rich in α-(1→3)-glucan and can be successfully used for mutanase induction in Trichoderma harzianum. The content of this biopolymer in the CWP depended on the age of fruiting bodies and increased along with their maturation. In the case of CWP prepared from vegetative mycelia, the amount of α-(1→3)-glucan depended on the mycelium age and also on the kind of medium used for its cultivation. All CWPs prepared from the individually harvested fruiting body specimens induced high mutanase activity (0.53-0.82 U/mL) in T. harzianum after 3 days of cultivation. As for the CWPs obtained from the hyphal mycelia of L. sulpureus, the maximal enzyme productivity (0.34 U/mL after 3 days of incubation) was recorded for CWP prepared from the 3 week-old mycelium cultivated in Sabouraud medium. Statistically, a high positive correlation was found between the total percentage content of α-(1→3)-glucan in the CWP and the mutanase activity.


Assuntos
Coriolaceae/metabolismo , Carpóforos/metabolismo , Glucanos/metabolismo , Glicosídeo Hidrolases/metabolismo , Micélio/metabolismo , Trichoderma/enzimologia , Parede Celular/metabolismo , Coriolaceae/crescimento & desenvolvimento , Indução Enzimática , Imunofluorescência , Carpóforos/crescimento & desenvolvimento , Micélio/crescimento & desenvolvimento , Trichoderma/genética
20.
Rev Argent Microbiol ; 44(2): 105-12, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22997770

RESUMO

The aim of this work was to evaluate the potential of grape stalks, an agroindustrial waste, for growth and lignocellulolytic enzyme production via solid-state fermentation, using the following three white rot fungi: Trametes trogii, Stereum hirsutum and Coriolus antarcticus. The decolorization of several dyes by the above mentioned cultures was also investigated. Similar values of dry weight loss of the substrate were measured after 60 days (33-43 %). C. antarcticus produced the highest laccase and Mn-peroxidase activities (33.0 and 1.6 U/g dry solid). The maximum endoglucanase production was measured in S. hirsutum cultures (10.4 U/g), while the endoxylanase peak corresponded to T. trogii (14.6 U/g). The C. antarcticus/grape stalk system seems potentially competitive in bioremediation of textile processing effluents, attaining percentages of decolorization of 93, 86, 82, 82, 77, and 58% for indigo carmine, malachite green, azure B, remazol brilliant blue R, crystal violet and xylidine, respectively, in 5 h.


Assuntos
Basidiomycota/crescimento & desenvolvimento , Biodegradação Ambiental , Celulase/isolamento & purificação , Corantes/metabolismo , Endo-1,4-beta-Xilanases/isolamento & purificação , Proteínas Fúngicas/isolamento & purificação , Microbiologia Industrial/métodos , Resíduos Industriais , Lacase/isolamento & purificação , Lignina/metabolismo , Peroxidases/isolamento & purificação , Caules de Planta/microbiologia , Vitis/microbiologia , Argentina , Basidiomycota/enzimologia , Celulase/metabolismo , Corantes/classificação , Coriolaceae/enzimologia , Coriolaceae/crescimento & desenvolvimento , Endo-1,4-beta-Xilanases/metabolismo , Fermentação , Proteínas Fúngicas/metabolismo , Lacase/metabolismo , Peroxidases/metabolismo , Trametes/enzimologia , Trametes/crescimento & desenvolvimento
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