PDA v.2: improving the exploration and estimation of nucleotide polymorphism in large datasets of heterogeneous DNA.
Nucleic Acids Res
; 34(Web Server issue): W632-4, 2006 Jul 01.
Article
em En
| MEDLINE
| ID: mdl-16845088
ABSTRACT
Pipeline Diversity Analysis (PDA) is an open-source, web-based tool that allows the exploration of polymorphism in large datasets of heterogeneous DNA sequences, and can be used to create secondary polymorphism databases for different taxonomic groups, such as the Drosophila Polymorphism Database (DPDB). A new version of the pipeline presented here, PDA v.2, incorporates substantial improvements, including new methods for data mining and grouping sequences, new criteria for data quality assessment and a better user interface. PDA is a powerful tool to obtain and synthesize existing empirical evidence on genetic diversity in any species or species group. PDA v.2 is available on the web at http//pda.uab.es/.
Texto completo:
1
Coleções:
01-internacional
Base de dados:
MEDLINE
Assunto principal:
Polimorfismo Genético
/
Software
/
Análise de Sequência de DNA
/
Bases de Dados de Ácidos Nucleicos
Limite:
Animals
Idioma:
En
Ano de publicação:
2006
Tipo de documento:
Article