PfamAlyzer: domain-centric homology search.
Bioinformatics
; 23(24): 3382-3, 2007 Dec 15.
Article
em En
| MEDLINE
| ID: mdl-17977882
UNLABELLED: PfamAlyzer is a Java applet that enables exploration of Pfam domain architectures using a user-friendly graphical interface. It can search the UniProt protein database for a domain pattern. Domain patterns similar to the query are presented graphically by PfamAlyzer either in a ranked list or pinned to the tree of life. Such domain-centric homology search can assist identification of distant homologs with shared domain architecture. AVAILABILITY: PfamAlyzer has been integrated with the Pfam database and can be accessed at http://pfam.cgb.ki.se/pfamalyzer.
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Coleções:
01-internacional
Base de dados:
MEDLINE
Assunto principal:
Sistemas de Gerenciamento de Base de Dados
/
Interface Usuário-Computador
/
Software
/
Proteínas
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Alinhamento de Sequência
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Análise de Sequência de Proteína
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Bases de Dados de Proteínas
Idioma:
En
Ano de publicação:
2007
Tipo de documento:
Article