Fast screening of protein surfaces using geometric invariant fingerprints.
Proc Natl Acad Sci U S A
; 106(39): 16622-6, 2009 Sep 29.
Article
em En
| MEDLINE
| ID: mdl-19805347
ABSTRACT
We develop a rapid and efficient method for the comparison of protein local surface similarities using geometric invariants (fingerprints). By combining fast fingerprint comparison with explicit alignment, we successfully screen the entire Protein Data Bank for proteins that possess local surface similarities. Our method is independent of sequence and fold similarities, and has potential application to protein structure annotation and protein-protein interface design.
Texto completo:
1
Coleções:
01-internacional
Base de dados:
MEDLINE
Assunto principal:
Proteínas
Tipo de estudo:
Diagnostic_studies
/
Screening_studies
Idioma:
En
Ano de publicação:
2009
Tipo de documento:
Article